FFCP PHASE2:Hg19::chr11:125648690..125648734,-: Difference between revisions
From FANTOM5_SSTAR
Jump to: navigation, search
(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:399967 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:32249 |TSScl...") |
No edit summary |
||
Line 2: | Line 2: | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=399967 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=32249 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=Q6UY27 | ||
|association_with_transcript=0bp_to_ENST00000358524,ENST00000436890,NM_212555,uc001qcu.2,uc010sbj.1_5end | |association_with_transcript=0bp_to_ENST00000358524,ENST00000436890,NM_212555,uc001qcu.2,uc010sbj.1_5end | ||
|cluster_id=chr11:125648690..125648734,- | |cluster_id=chr11:125648690..125648734,- |
Latest revision as of 13:35, 16 September 2015
Short description: | p1@PATE2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PATE2_5end |
Coexpression cluster: | C39_epididymis_ductus_seminal_testis_acute_thyroid_CD133 |
Association with transcript: | 0bp_to_ENST00000358524, ENST00000436890, NM_212555, uc001qcu.2, uc010sbj.1_5end |
EntrezGene: | PATE2 |
HGNC: | 32249 |
UniProt: | Q6UY27 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p1@PATE2 |
---|
0
50
100
150
200
250
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
male genital duct | 2.28e-85 | 3 |
internal male genitalia | 2.28e-85 | 3 |
duct of male reproductive system | 2.61e-64 | 4 |
male reproductive organ | 1.21e-41 | 11 |
male organism | 2.03e-32 | 22 |
male reproductive system | 2.03e-32 | 22 |
epididymis | 7.48e-30 | 1 |
vas deferens | 9.99e-30 | 1 |
spermatic cord | 9.99e-30 | 1 |
seminal vesicle | 1.33e-29 | 1 |
Showing 1 to 10 of 44 entries
Ontology term | p-value | n |
---|---|---|
lung small cell carcinoma | 2.26e-08 | 4 |
Showing 1 to 1 of 1 entries