FFCP PHASE1:Hg19::chr3:167452633..167452697,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=11235 | |EntrezGene=11235 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8761 | |HGNC=8761 | ||
|TSSclassifier=strong | |||
|UniProt=Q9BUL8,C9J6F3,F8WDF3 | |UniProt=Q9BUL8,C9J6F3,F8WDF3 | ||
|association_with_transcript=0bp_to_ENST00000470131,ENST00000471885,ENST00000494502,NM_145859,uc003fey.2,uc003fez.2_5end | |association_with_transcript=0bp_to_ENST00000470131,ENST00000471885,ENST00000494502,NM_145859,uc003fey.2,uc003fez.2_5end | ||
|cluster_id=chr3:167452633..167452697,- | |||
|description=CAGE_peak_1_at_PDCD10_5end | |description=CAGE_peak_1_at_PDCD10_5end | ||
|id=chr3:167452633..167452697,- | |id=chr3:167452633..167452697,- | ||
|ontology_enrichment_celltype=CL:0002032!4.60e-13!165;CL:0000837!4.60e-13!165;CL:0000763!8.36e-12!112;CL:0000049!8.36e-12!112;CL:0000037!2.73e-11!172;CL:0000566!2.73e-11!172;CL:0002031!8.51e-11!124;CL:0000839!1.18e-10!70;CL:0000988!1.79e-09!182;CL:0000766!2.16e-09!76;CL:0000738!2.25e-09!140;CL:0000557!4.28e-09!71;CL:0002194!4.96e-09!63;CL:0000576!4.96e-09!63;CL:0000040!4.96e-09!63;CL:0000559!4.96e-09!63;CL:0002009!6.12e-09!65;CL:0002087!7.80e-09!119 | |ontology_enrichment_celltype=CL:0002032!4.60e-13!165;CL:0000837!4.60e-13!165;CL:0000763!8.36e-12!112;CL:0000049!8.36e-12!112;CL:0000037!2.73e-11!172;CL:0000566!2.73e-11!172;CL:0002031!8.51e-11!124;CL:0000839!1.18e-10!70;CL:0000988!1.79e-09!182;CL:0000766!2.16e-09!76;CL:0000738!2.25e-09!140;CL:0000557!4.28e-09!71;CL:0002194!4.96e-09!63;CL:0000576!4.96e-09!63;CL:0000040!4.96e-09!63;CL:0000559!4.96e-09!63;CL:0002009!6.12e-09!65;CL:0002087!7.80e-09!119 | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2=CL:0002032,4.08e-12,161;CL:0000837,4.08e-12,161;CL:0000763,7.94e-11,108;CL:0000049,7.94e-11,108;CL:0000037,2.07e-10,168;CL:0002031,7.13e-10,120;CL:0000839,1.27e-09,66;CL:0000988,5.34e-09,177;CL:0000738,1.57e-08,136;CL:0000766,2.02e-08,72;CL:0000557,4.03e-08,67;CL:0002194,4.91e-08,59;CL:0000576,4.91e-08,59;CL:0000040,4.91e-08,59;CL:0000559,4.91e-08,59;CL:0002087,5.55e-08,115;CL:0002009,5.92e-08,61 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:305!2.82e-13!106;DOID:14566!7.21e-13!239;DOID:162!9.43e-13!235;DOID:0050687!1.45e-09!143;DOID:0050686!2.07e-08!137 | |ontology_enrichment_disease=DOID:305!2.82e-13!106;DOID:14566!7.21e-13!239;DOID:162!9.43e-13!235;DOID:0050687!1.45e-09!143;DOID:0050686!2.07e-08!137 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2=DOID:305,2.82e-13,106;DOID:14566,7.21e-13,239;DOID:162,9.43e-13,235;DOID:0050687,1.45e-09,143;DOID:0050686,2.07e-08,137 | |||
|ontology_enrichment_uberon=UBERON:0002390!1.94e-10!102;UBERON:0003061!1.94e-10!102;UBERON:0002193!4.43e-09!112;UBERON:0002371!5.99e-08!80;UBERON:0001474!9.50e-08!86;UBERON:0004765!1.28e-07!101;UBERON:0001434!1.28e-07!101 | |ontology_enrichment_uberon=UBERON:0002390!1.94e-10!102;UBERON:0003061!1.94e-10!102;UBERON:0002193!4.43e-09!112;UBERON:0002371!5.99e-08!80;UBERON:0001474!9.50e-08!86;UBERON:0004765!1.28e-07!101;UBERON:0001434!1.28e-07!101 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.73e-09,98;UBERON:0003061,1.73e-09,98;UBERON:0002193,3.33e-08,108;UBERON:0002371,4.73e-07,76;UBERON:0001474,7.06e-07,82;UBERON:0004765,7.19e-07,90 | |||
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| ||
|short_description=p1@PDCD10 | |short_description=p1@PDCD10 | ||
}} | }} |
Latest revision as of 13:40, 16 September 2015
Short description: | p1@PDCD10 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PDCD10_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000470131, ENST00000471885, ENST00000494502, NM_145859, uc003fey.2, uc003fez.2_5end |
EntrezGene: | PDCD10 |
HGNC: | 8761 |
UniProt: | Q9BUL8C9J6F3F8WDF3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic oligopotent progenitor cell | 4.08e-12 | 161 |
hematopoietic multipotent progenitor cell | 4.08e-12 | 161 |
myeloid cell | 7.94e-11 | 108 |
common myeloid progenitor | 7.94e-11 | 108 |
hematopoietic stem cell | 2.07e-10 | 168 |
hematopoietic lineage restricted progenitor cell | 7.13e-10 | 120 |
myeloid lineage restricted progenitor cell | 1.27e-09 | 66 |
hematopoietic cell | 5.34e-09 | 177 |
leukocyte | 1.57e-08 | 136 |
myeloid leukocyte | 2.02e-08 | 72 |
granulocyte monocyte progenitor cell | 4.03e-08 | 67 |
monopoietic cell | 4.91e-08 | 59 |
monocyte | 4.91e-08 | 59 |
monoblast | 4.91e-08 | 59 |
promonocyte | 4.91e-08 | 59 |
nongranular leukocyte | 5.55e-08 | 115 |
macrophage dendritic cell progenitor | 5.92e-08 | 61 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.73e-09 | 98 |
blood island | 1.73e-09 | 98 |
hemolymphoid system | 3.33e-08 | 108 |
bone marrow | 4.73e-07 | 76 |
bone element | 7.06e-07 | 82 |
skeletal element | 7.19e-07 | 90 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 2.82e-13 | 106 |
disease of cellular proliferation | 7.21e-13 | 239 |
cancer | 9.43e-13 | 235 |
cell type cancer | 1.45e-09 | 143 |
organ system cancer | 2.07e-08 | 137 |