FFCP PHASE1:Hg19::chr16:3692931..3692943,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1773 | |EntrezGene=1773 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2956 | |HGNC=2956 | ||
|TSSclassifier=strong | |||
|UniProt=P24855 | |UniProt=P24855 | ||
|association_with_transcript=0bp_to_ENST00000407479_5end | |association_with_transcript=0bp_to_ENST00000407479_5end | ||
|cluster_id=chr16:3692931..3692943,+ | |||
|description=CAGE_peak_6_at_DNASE1_5end | |description=CAGE_peak_6_at_DNASE1_5end | ||
|id=chr16:3692931..3692943,+ | |id=chr16:3692931..3692943,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002537;8.10e-22;5!CL:0002577;2.57e-16;3!CL:0000349;2.57e-15;19!CL:0000167;1.71e-13;1!CL:0000164;1.71e-13;1!CL:0000502;1.71e-13;1!CL:0000172;1.71e-13;1!CL:0000173;1.71e-13;1!CL:0002553;7.23e-13;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002537,9.01e-22,5;CL:0002577,2.58e-16,3;CL:0000349,2.69e-15,19;CL:0000167,1.61e-13,1;CL:0000164,1.61e-13,1;CL:0000502,1.61e-13,1;CL:0000172,1.61e-13,1;CL:0000173,1.61e-13,1;CL:0002351,1.61e-13,1;CL:0002553,6.82e-13,1 | |||
|ontology_enrichment_development_v019=CL:0002351;1.71e-13;1 | |||
|ontology_enrichment_disease=DOID:5093!4.52e-11!4;DOID:1612!4.52e-11!4 | |||
|ontology_enrichment_disease_v019=DOID:4430;1.71e-13;1 | |||
|ontology_enrichment_disease_v019_2=DOID:4430,1.61e-13,1 | |||
|ontology_enrichment_uberon=UBERON:0002294!2.75e-11!7;UBERON:0001173!2.75e-11!7;UBERON:0004912!2.75e-11!7;UBERON:0005631!1.33e-10!14;UBERON:0000158!1.33e-10!14;UBERON:0004119!4.94e-09!169;UBERON:0000925!4.94e-09!169;UBERON:0006595!4.94e-09!169;UBERON:0001007!3.00e-08!155;UBERON:0001555!3.00e-08!155;UBERON:0007026!3.00e-08!155;UBERON:0004921!3.01e-08!129;UBERON:0004185!3.01e-08!129;UBERON:0000160!2.00e-07!27;UBERON:0002110!2.23e-07!3;UBERON:0006242!2.23e-07!3;UBERON:0000077!3.83e-07!130 | |ontology_enrichment_uberon=UBERON:0002294!2.75e-11!7;UBERON:0001173!2.75e-11!7;UBERON:0004912!2.75e-11!7;UBERON:0005631!1.33e-10!14;UBERON:0000158!1.33e-10!14;UBERON:0004119!4.94e-09!169;UBERON:0000925!4.94e-09!169;UBERON:0006595!4.94e-09!169;UBERON:0001007!3.00e-08!155;UBERON:0001555!3.00e-08!155;UBERON:0007026!3.00e-08!155;UBERON:0004921!3.01e-08!129;UBERON:0004185!3.01e-08!129;UBERON:0000160!2.00e-07!27;UBERON:0002110!2.23e-07!3;UBERON:0006242!2.23e-07!3;UBERON:0000077!3.83e-07!130 | ||
|ontology_enrichment_uberon_v019=UBERON:0000160;3.32e-23;17!UBERON:0002108;4.42e-22;4!UBERON:0005409;4.19e-18;22!UBERON:0000305;8.96e-16;7!UBERON:0004921;6.25e-14;33!UBERON:0001987;1.75e-12;4!UBERON:0000478;4.05e-12;24!UBERON:0005631;3.21e-11;10!UBERON:0000158;3.21e-11;10!UBERON:0000059;3.91e-10;11!UBERON:0000007;4.55e-07;2!UBERON:0001555;5.91e-07;54 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,3.60e-23,17;UBERON:0002108,5.11e-22,4;UBERON:0005631,9.36e-21,14;UBERON:0000158,9.36e-21,14;UBERON:0005409,5.86e-16,25;UBERON:0000305,9.67e-16,7;UBERON:0004871,7.51e-14,8;UBERON:0001987,1.75e-12,4;UBERON:0004340,1.75e-12,4;UBERON:0000478,4.20e-12,24;UBERON:0000059,3.91e-10,11;UBERON:0003124,1.63e-07,7;UBERON:0004119,2.60e-07,160;UBERON:0000925,2.60e-07,160;UBERON:0006595,2.60e-07,160;UBERON:0000007,3.70e-07,2;UBERON:0004921,6.80e-07,118 | |||
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| ||
|short_description=p6@DNASE1 | |short_description=p6@DNASE1 | ||
}} | }} |
Latest revision as of 15:08, 16 September 2015
Short description: | p6@DNASE1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_DNASE1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000407479_5end |
EntrezGene: | DNASE1 |
HGNC: | 2956 |
UniProt: | P24855 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
amnion mesenchymal stem cell | 9.01e-22 | 5 |
placental epithelial cell | 2.58e-16 | 3 |
extraembryonic cell | 2.69e-15 | 19 |
peptide hormone secreting cell | 1.61e-13 | 1 |
enteroendocrine cell | 1.61e-13 | 1 |
type D enteroendocrine cell | 1.61e-13 | 1 |
somatostatin secreting cell | 1.61e-13 | 1 |
pancreatic D cell | 1.61e-13 | 1 |
progenitor cell of endocrine pancreas | 1.61e-13 | 1 |
lung fibroblast | 6.82e-13 | 1 |
Ontology term | p-value | n |
---|---|---|
intestine | 3.60e-23 | 17 |
small intestine | 5.11e-22 | 4 |
extraembryonic membrane | 9.36e-21 | 14 |
membranous layer | 9.36e-21 | 14 |
gastrointestinal system | 5.86e-16 | 25 |
amnion | 9.67e-16 | 7 |
somatic layer of lateral plate mesoderm | 7.51e-14 | 8 |
placenta | 1.75e-12 | 4 |
allantois | 1.75e-12 | 4 |
extraembryonic structure | 4.20e-12 | 24 |
large intestine | 3.91e-10 | 11 |
chorion | 1.63e-07 | 7 |
endoderm-derived structure | 2.60e-07 | 160 |
endoderm | 2.60e-07 | 160 |
presumptive endoderm | 2.60e-07 | 160 |
pituitary gland | 3.70e-07 | 2 |
subdivision of digestive tract | 6.80e-07 | 118 |
Ontology term | p-value | n |
---|---|---|
somatostatinoma | 1.61e-13 | 1 |