FFCP PHASE1:Hg19::chr5:159739763..159739787,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr5:159739763..159739787,- to FFCP PHASE1:Hg19::chr5:159739763..159739787,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=79616 | |EntrezGene=79616 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25876 | |HGNC=25876 | ||
|TSSclassifier=strong | |||
|UniProt=B4DZA8,Q8IV13 | |UniProt=B4DZA8,Q8IV13 | ||
|association_with_transcript=-156bp_to_ENST00000257536,ENST00000393977_5end | |||
|cluster_id=chr5:159739763..159739787,- | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_4_at_CCNJL_5end | |||
|id=chr5:159739763..159739787,- | |||
|ontology_enrichment_celltype=CL:0002076!2.07e-09!43;CL:0000066!1.09e-07!254;CL:0000223!1.46e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0000094;6.60e-22;8!CL:0000775;1.20e-21;3!CL:0000081;6.93e-16;11!CL:0000771;2.80e-15;2!CL:0000167;8.40e-08;1!CL:0000164;8.40e-08;1!CL:0000502;8.40e-08;1!CL:0000511;8.40e-08;1!CL:0002625;8.40e-08;1!CL:0000172;8.40e-08;1!CL:0000216;8.40e-08;1!CL:0000173;8.40e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000094,6.61e-22,8;CL:0000775,1.20e-21,3;CL:0000081,6.94e-16,11;CL:0000771,2.80e-15,2;CL:0000167,5.79e-08,1;CL:0000164,5.79e-08,1;CL:0000502,5.79e-08,1;CL:0000172,5.79e-08,1;CL:0000173,5.79e-08,1;CL:0002351,5.79e-08,1;CL:0000511,6.19e-08,1;CL:0002625,6.19e-08,1;CL:0000216,6.19e-08,1 | |||
|ontology_enrichment_development_v019=UBERON:0006215;3.26e-21;3!CL:0002351;8.40e-08;1!UBERON:0001045;8.40e-08;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4430;8.40e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:4430,5.79e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0000178!4.46e-12!15;UBERON:0000179!4.46e-12!15;UBERON:0000463!4.46e-12!15;UBERON:0007023!8.10e-10!115;UBERON:0001004!3.65e-07!72 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.16e-35;15!UBERON:0000179;2.16e-35;15!UBERON:0000463;2.16e-35;15!UBERON:0002390;1.46e-14;32!UBERON:0002037;7.02e-11;6!UBERON:0002193;3.77e-08;42!UBERON:0001154;8.40e-08;1!UBERON:0001136;8.40e-08;1!UBERON:0001153;8.40e-08;1!UBERON:0001343;8.40e-08;1!UBERON:0009854;8.40e-08;1!UBERON:0004910;8.40e-08;1!UBERON:0004813;8.40e-08;1!UBERON:0002680;2.10e-07;9!UBERON:0001895;2.10e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,2.08e-35,15;UBERON:0000179,2.08e-35,15;UBERON:0000463,2.08e-35,15;UBERON:0002037,7.14e-11,6;UBERON:0006215,7.14e-11,6;UBERON:0001136,6.19e-08,1;UBERON:0001343,6.19e-08,1;UBERON:0004910,6.19e-08,1;UBERON:0005154,6.19e-08,1;UBERON:0005295,6.19e-08,1;UBERON:0004813,6.19e-08,1;UBERON:0005297,6.19e-08,1;UBERON:0005294,6.19e-08,1;UBERON:0010141,6.19e-08,1;UBERON:0005891,6.19e-08,1;UBERON:0001154,9.29e-08,1;UBERON:0001153,9.29e-08,1;UBERON:0001045,9.29e-08,1;UBERON:0007023,1.42e-07,114;UBERON:0002680,2.13e-07,9;UBERON:0001895,2.13e-07,9;UBERON:0010092,2.13e-07,9 | |||
|phase1_expression=0,0,0,0,0,0.872338524100369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0,0,0.0787107813136792,0,0,0.309632246632152,0.919421224478927,0.30120591877825,0,0,0,0,0,0.200544447470142,0,0.223915474239924,0,0,0,0,0.242584061187816,0,0,0,0,0,0.236482229888585,0,0,0,0,0,0.224723484445085,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275118041940067,0,0.516833518338658,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,38.2163210564583,34.9002237733493,0,0,0,0,0,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245668634623536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169560592310488,0.57978255948989,0.818238361772504,0.286804595389004,0.121973706129595,0,0.232387885739037,0,0,0,0,0,0,0,0,0,0.168584690078102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.737930631258681,0,0.439001141634502,2.24803506515239,0,0.0925884451585296,0,0,0,0,0,0,0,0,0.790204397959275,0,0,0,0,0.93733833986777,0.335964256397719,0.141775097242386,0.0895585227028483,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0,0,0,0,0,0,0,24.717231790257,8.97484377612075,28.1802549136504,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,0.431428401637234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.725156697549733,0.601519410909855,0.368323955743585,0.114814448164607,0,0,0.451199612907412,0.0770153371044148,0,0,0.105551628892876,0,0,0.215915916102139,0,0,0.501689773854853,0,0,0,0,0,0,0,0,0.412164046590889,0.27470839445503,0,1.14853107599234,0,1.6068392984416,0,0,0,0,0,0,0,0,0.165284915360978,0.192190067365106,0.510450849978337,1.11273558941105,0,0,0,0,1.06461206063404,0,0.18532421910392,0,0,0,0,0,0,0,0,0,0,0,0.404364963146632,1.58510321173008,0,0,0,1.05650146756755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,1.08890984861323,0.188287601553558,0.43050537267123,0,0.443430153536676,0.229723400206959,9.64150457541122,4.58782324285425,5.69647187174163,5.24109906007136,4.52498500394814,12.9694662238543,6.48037724685738,10.3106272918255,0.106824071127473,0,0,0,0,0.213425530045242,0,0,0,0,0,0,0,0.156679895773023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211125408127993,0,1.10513566212459,0,0,0,0,0.629078458031288,0.358042349351218,0,0,4.7896618469388,0,0,0,0,0,0,0,0,0.254253650292766,0,0,0,0,0,0,9.15490417902499,12.2742978523659,2.95547618953547,0.219385397153973,0,0.139423744278603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.326465616318295,0,0,0.995261931078505,0.265372693510018,0,0,0.123563938946503,0.104421949505455,0.067401132980677,0,0,0,0.586993856796269,0,0,1.20990716048664,0,0.126373159256976,0,0,0,0,0,0,0.284609546029793,0.277349346026277,0.867798691675654,0,0.0870592065804026,0.17472666824203,0,0,0,0.0821154570532092,0,0,0,0,0.19871461170299,0,0,0,0,0,0.288180834308212,0,0.514784993585894,0.288109595976299,0,0.471388069233591,0,0,0,0.288950589901519,0,0,0,0,0,0,0,0,0,0,0.223171457441873,0.0671834724867263,0,0,0.0787831823072236,0,0,0.492137407573744,0,0,0,0.160753148465019,0.137539436597234,0,0,0,0.0607495566580247,0.335434687599266,0.0788057072991982,0.524545881349981,0,0.179287339332845,0.383830394638891,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0.129282956361551,0,0.513260513652988,0.704815022316672,0.106787412567695,1.10043013569766,0.414239055347196,0.496166021811951,0,0,0.638341257770182,0,0,0,0,0.314108192500469,0,0,0.1251909307065,0,0.554645257684261,0.18628920882415,0.415045904808692,0.124980407962107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0,0,0.406870733204662,0,0.107410557042488,0,0,0,0,0,0,0.192619830407303,0,0,0.453411851024545,0.231522474323834,0,0.179088841081487,0.926404341482917,0,0.530067437837643,0,0,0,0,0,0,0.584580926518165,0.132864840313363,0,0,0,0.633936370075881,0,0,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128458450192919,0,0,0,0,0,0,0,0.196295437002051,0,0.183428598521679,0.346576998451015,0,0,0,0,0,0,0,0.163771917510097,0,0.0675375846183947,0,0.206686796501184,0,0,0,0.496211178389294,0,0.383287282918786,0,0,0,0,0.0887023701626388,0,0.171488009437418,0.135939465953663,0,0,0,0,0,0,0,0,0,0.0714765441766563,0.158013611732727,0.23248285073625,0,0,0,0,0,0.430227358820278,0,0,0.423387050190929,0.4582137370881,0,0,0.111855431797792,0,0,0.647428837187895,0.102662806856247,0,0,0,0.198950775161368,0,0,0.109940516745429,0,0.154348316215889,0,1.41095188908457,0,1.88541237681301,0,0,0,0,0.469919589899268,0.45120521581504,0,0.178553938605658,0.352894871715692,0.802413666891683,0.730336388246517,0.917458566809082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606229585745915,0.267964130156178,0,0.20686599172379,0,0,0.452122368852043,0.248298857183432,0,0.0636471582781649,0.202117188958219,0,0.684466602170562,0.202056159043763,0.215166616178029,0,0,0.106727345877715,0,0,0,0.122241444182866,0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| ||
|short_description=p4@CCNJL | |||
}} | }} |
Latest revision as of 16:10, 16 September 2015
Short description: | p4@CCNJL |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_CCNJL_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | -156bp_to_ENST00000257536, ENST00000393977_5end |
EntrezGene: | CCNJL |
HGNC: | 25876 |
UniProt: | B4DZA8Q8IV13 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granulocyte | 6.61e-22 | 8 |
neutrophil | 1.20e-21 | 3 |
blood cell | 6.94e-16 | 11 |
eosinophil | 2.80e-15 | 2 |
peptide hormone secreting cell | 5.79e-08 | 1 |
enteroendocrine cell | 5.79e-08 | 1 |
type D enteroendocrine cell | 5.79e-08 | 1 |
somatostatin secreting cell | 5.79e-08 | 1 |
pancreatic D cell | 5.79e-08 | 1 |
progenitor cell of endocrine pancreas | 5.79e-08 | 1 |
androgen binding protein secreting cell | 6.19e-08 | 1 |
seminiferous tubule epithelial cell | 6.19e-08 | 1 |
Sertoli cell | 6.19e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
blood | 2.08e-35 | 15 |
haemolymphatic fluid | 2.08e-35 | 15 |
organism substance | 2.08e-35 | 15 |
cerebellum | 7.14e-11 | 6 |
rhombic lip | 7.14e-11 | 6 |
mesothelium | 6.19e-08 | 1 |
seminiferous tubule of testis | 6.19e-08 | 1 |
epithelium of male gonad | 6.19e-08 | 1 |
epithelial cord | 6.19e-08 | 1 |
sex cord | 6.19e-08 | 1 |
seminiferous tubule epithelium | 6.19e-08 | 1 |
testis sex cord | 6.19e-08 | 1 |
genital ridge | 6.19e-08 | 1 |
primitive sex cord of indifferent gonad | 6.19e-08 | 1 |
coelomic epithelium | 6.19e-08 | 1 |
vermiform appendix | 9.29e-08 | 1 |
caecum | 9.29e-08 | 1 |
midgut | 9.29e-08 | 1 |
adult organism | 1.42e-07 | 114 |
regional part of metencephalon | 2.13e-07 | 9 |
metencephalon | 2.13e-07 | 9 |
future metencephalon | 2.13e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
somatostatinoma | 5.79e-08 | 1 |