FFCP PHASE1:Hg19::chr16:4431039..4431055,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=114990 | |EntrezGene=114990 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=18517 | |HGNC=18517 | ||
|TSSclassifier=strong | |||
|UniProt=Q6EMK4 | |UniProt=Q6EMK4 | ||
|association_with_transcript=-39bp_to_BC013767_5end | |association_with_transcript=-39bp_to_BC013767_5end | ||
|cluster_id=chr16:4431039..4431055,+ | |||
|coexpression_cluster_id=C1000 | |coexpression_cluster_id=C1000 | ||
|description=CAGE_peak_3_at_VASN_5end | |description=CAGE_peak_3_at_VASN_5end | ||
|id=chr16:4431039..4431055,+ | |id=chr16:4431039..4431055,+ | ||
|ontology_enrichment_celltype=CL:0000057!9.97e-22!75;CL:0000055!5.08e-21!180;CL:0002334!1.26e-07!12;CL:0002620!4.59e-07!23 | |ontology_enrichment_celltype=CL:0000057!9.97e-22!75;CL:0000055!5.08e-21!180;CL:0002334!1.26e-07!12;CL:0002620!4.59e-07!23 | ||
|ontology_enrichment_celltype_v019=CL:0002334;4.69e-14;12!CL:0000499;1.95e-11;28!CL:0000135;1.98e-08;3!CL:0000388;1.98e-08;3!CL:0002320;5.36e-08;188!CL:0000346;1.08e-07;3!CL:1000428;1.08e-07;3!CL:0002559;1.34e-07;5!CL:0002615;1.35e-07;3!CL:0002580;1.35e-07;3!CL:0000134;1.95e-07;55!CL:0000723;6.99e-07;61 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,3.85e-15,76;CL:0002334,6.35e-14,12;CL:0002320,1.50e-11,361;CL:0000048,1.70e-11,427;CL:0000499,2.47e-11,28;CL:0000723,4.28e-11,433;CL:0000134,6.94e-11,354;CL:0000034,1.41e-10,441;CL:0000219,9.69e-10,386;CL:0000135,1.63e-08,3;CL:0000388,1.63e-08,3;CL:0002615,5.69e-08,3;CL:0000346,7.37e-08,3;CL:1000428,7.37e-08,3;CL:0002559,8.47e-08,5;CL:0002580,1.89e-07,3;CL:0000136,4.00e-07,15 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!1.21e-07!14 | |ontology_enrichment_disease=DOID:2394!1.21e-07!14 | ||
|ontology_enrichment_disease_v019=DOID:0060084;1.17e-07;3!DOID:127;1.17e-07;3 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,3.71e-08,3;DOID:127,3.71e-08,3 | |||
|ontology_enrichment_uberon=UBERON:0003102!4.38e-07!95 | |ontology_enrichment_uberon=UBERON:0003102!4.38e-07!95 | ||
|ontology_enrichment_uberon_v019=UBERON:0003688;1.37e-09;6!UBERON:0002358;1.37e-09;6!UBERON:0003684;1.37e-09;6!UBERON:0001178;1.37e-09;6!UBERON:0004457;6.56e-09;9!UBERON:0000042;6.56e-09;9!UBERON:0007846;1.98e-08;3!UBERON:0000043;1.98e-08;3!UBERON:0007845;1.98e-08;3!UBERON:0000412;1.08e-07;3!UBERON:0001992;1.08e-07;3!UBERON:0002073;1.34e-07;5!UBERON:0002384;2.90e-07;198 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,8.17e-11,371;UBERON:0003688,6.07e-10,6;UBERON:0002358,6.07e-10,6;UBERON:0003684,6.07e-10,6;UBERON:0001178,6.07e-10,6;UBERON:0007846,1.63e-08,3;UBERON:0000043,1.63e-08,3;UBERON:0007845,1.63e-08,3;UBERON:0000412,7.37e-08,3;UBERON:0001992,7.37e-08,3;UBERON:0002073,8.47e-08,5;UBERON:0005086,8.47e-08,5;UBERON:0004457,9.97e-07,12;UBERON:0000042,9.97e-07,12 | |||
|phase1_expression=2.90685406832891,4.06790995392868,1.69145284915165,3.00219895059391,1.78784437770915,0.872338524100369,0,0,0.261185628199839,0.245733936501509,0,0.218441372130172,0.263766978228454,0.495065411840187,0.331397375727916,0.672325146451775,1.20538905604795,2.19093027116212,0.487932798790507,0.246242116153576,0.204000691244253,0.626909442956176,0,0.136874425072884,0.502170558379211,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329851300186716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,1.44575660953827,0,1.30361867064741,0,2.43317435151318,0.283604451492204,0.443458794925128,0.087834785693126,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0.56530794192401,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13967460498122,0.397227542439656,3.72887606973458,0.709336764396714,0.560677600142307,0,0.98667019366864,0.311211035399766,0.134710672069688,0.163461903113459,0.151357427644931,1.15235184896,0,0,0,0.896692083310806,0.23486899728753,0.485618833104395,0.140450806702248,0.204154171254893,0.368502951935304,0.826606249406124,0,1.97813543422845,0.910161361938026,2.15585442544872,0.336672227908132,0.375355559615893,0.277064115484183,0.877955241761676,2.75839016219118,0.751190294532984,0.113432183160021,0.89694817844431,0,0.635795703478686,2.40072876867522,0.618315175430633,2.31876486041066,1.11670113798954,2.02531598689519,0.876933046450788,1.26216887122057,0.920498986422993,2.7479829659198,2.84007674013291,0.604512589365842,0,0,0,0,0,0,0.116193942869518,0.10366105501537,0,0,1.56449532329816,5.14592750554308,1.38134921352481,0.928735856063958,1.44375896333917,0.473227200159376,0.505754070234305,0.241011029883482,0.110293972732394,0.217879444092406,0,0,0,0,0,0,1.2347220339942,4.41026134156626,0,0,0,0,0.122988438543114,0,0,0,0,0.0925884451585296,0.325808305310325,0,0,0,0.117408694235822,0,0,0,0.790204397959275,0.858486162094873,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,1.71072446022705,0,0,0,0.112131084345361,0,0.1466765716419,0.775630294546667,10.7296933755565,0.845302752556,0.531876233169741,1.04007436911366,0.514414748524284,0,0,1.42977993658148,1.08524321078289,1.64648067356154,0.325736184293735,0,0.791951872933429,0.602878754119172,0,1.29964888536674,0,0,0,0.239624855491583,0,0,0.723906533337896,0.61642896765115,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0.858840442033979,1.00034104211935,1.08506009479894,1.24782516918484,3.39015078714607,0.788512075169673,0.819989904948992,0.300946099727719,15.9185252839189,1.03473071292505,0,0.184369168541703,0.695068915744663,0.195801157462741,0,0,0,0,0.909382714338778,0,0,1.24053903909388,1.2276957863045,3.64858122762996,2.05022638809122,0,1.60853921143608,4.45254199334973,1.3878872442239,0.887808626565635,0.328508624055237,1.03850885836724,1.39452454151951,0,0,0.184161977871793,0.803701137152247,2.1850940160806,2.09799063935079,0,0.0770153371044148,0,0,0.211103257785751,0,0,0.215915916102139,0,0,1.00337954770971,0,0,0,0,0,0,0,0,0.103041011647722,0.732555718546747,0.082509499920588,0,0,1.6068392984416,0.290012154876366,0.616194468458578,1.22802939780904,0.689182862422653,0.644521469209642,1.0151168573996,0.93749290157711,0.0890320356467374,0,0.384380134730212,0,0.10115778085555,0,1.88887408098384,0,0,0,0,0,0,0,0.316379424718726,0.571890581771475,0.511795582622668,0,0.318203247925937,0,0,1.37268514868027,0.706874414074119,0,0,0,0,0.243713489631284,0,0.409499734223957,3.25232493493539,0,0,1.32687795048244,3.06915619677634,0,0,0,0,0,0.143411352204052,0.491245205065606,0.35667105148125,0.709522128141196,2.9555068941673,0.658589785919804,0.379473173765715,0.349934720244983,0,0.670302275535787,0,0.564862804660675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0.71623345421307,0.296964680832639,0,0,0.140669416410513,0,0,0.211125408127993,0.19924798825107,0,0,0,0,0,0,0,0,0.493217028184668,0,0,0,0.371072392647405,0,0,0,0,0.1137934482855,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0,0.384751292518985,0.341826167541004,0,0,0.108647371922008,0,0.549585560411174,0,0,0,0,0,0,0,0,0,0,0.489698424477443,0,0,0,0,0,0.296521128680622,0,0.104421949505455,0,0,0.234264445725339,0,0,0,0.394584402849391,0,0,0.189559738885464,0,0,0,0,0,0,0,0,1.04135843001079,0,0,0.34945333648406,0,0,0.0730893170861856,0,0.484945082442097,0,0,0,0.19871461170299,0,0,0.160317640503067,0.426905989478705,0.599428828746391,0,0,0.171594997861965,0,0,0,0,0.104602846312333,0.203996435272644,0.577901179803038,0,0.273810757783986,0,0,0,0,0.229160424011684,0,0.599037001496973,0,0,0,0.360299883542404,0,0.0787831823072236,0.659326867049332,0.26961417541674,0,0,0,0,0,0.137539436597234,0,0,0,0,0,0,0.209818352539992,0.105600336519406,0,0,0.714695326373367,0,0,4.88699641578341,1.72844298240254,1.95952416065645,1.19730191562487,0,0.511164065356265,0.113312091520126,0,0,0.129282956361551,0.13223260174269,0,0.7048150223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| ||
|short_description=p3@VASN | |short_description=p3@VASN | ||
}} | }} |
Latest revision as of 16:18, 16 September 2015
Short description: | p3@VASN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_VASN_5end |
Coexpression cluster: | C1000_Osteoblast_Preadipocyte_Hair_Adipocyte_tenocyte_Mesenchymal_leiomyoma |
Association with transcript: | -39bp_to_BC013767_5end |
EntrezGene: | VASN |
HGNC: | 18517 |
UniProt: | Q6EMK4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 3.85e-15 | 76 |
preadipocyte | 6.35e-14 | 12 |
connective tissue cell | 1.50e-11 | 361 |
multi fate stem cell | 1.70e-11 | 427 |
stromal cell | 2.47e-11 | 28 |
somatic stem cell | 4.28e-11 | 433 |
mesenchymal cell | 6.94e-11 | 354 |
stem cell | 1.41e-10 | 441 |
motile cell | 9.69e-10 | 386 |
fibrocyte | 1.63e-08 | 3 |
tendon cell | 1.63e-08 | 3 |
adipocyte of omentum tissue | 5.69e-08 | 3 |
hair follicle dermal papilla cell | 7.37e-08 | 3 |
stem cell of epidermis | 7.37e-08 | 3 |
hair follicle cell | 8.47e-08 | 5 |
preadipocyte of the breast | 1.89e-07 | 3 |
fat cell | 4.00e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 8.17e-11 | 371 |
omentum | 6.07e-10 | 6 |
peritoneum | 6.07e-10 | 6 |
abdominal cavity | 6.07e-10 | 6 |
visceral peritoneum | 6.07e-10 | 6 |
dense regular connective tissue | 1.63e-08 | 3 |
tendon | 1.63e-08 | 3 |
regular connective tissue | 1.63e-08 | 3 |
dermal papilla | 7.37e-08 | 3 |
papillary layer of dermis | 7.37e-08 | 3 |
hair follicle | 8.47e-08 | 5 |
hair follicle placode | 8.47e-08 | 5 |
cavity lining | 9.97e-07 | 12 |
serous membrane | 9.97e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 3.71e-08 | 3 |
leiomyoma | 3.71e-08 | 3 |