FFCP PHASE1:Hg19::chr12:118541803..118541847,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54621 | |EntrezGene=54621 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26078 | |HGNC=26078 | ||
|TSSclassifier=strong | |||
|UniProt=Q8N0Z9 | |UniProt=Q8N0Z9 | ||
|association_with_transcript=0bp_to_ENST00000536905,NM_019086,uc001tws.2,uc001twt.2_5end | |association_with_transcript=0bp_to_ENST00000536905,NM_019086,uc001tws.2,uc001twt.2_5end | ||
|cluster_id=chr12:118541803..118541847,- | |||
|coexpression_cluster_id=C45 | |coexpression_cluster_id=C45 | ||
|description=CAGE_peak_1_at_VSIG10_5end | |description=CAGE_peak_1_at_VSIG10_5end | ||
|id=chr12:118541803..118541847,- | |id=chr12:118541803..118541847,- | ||
|ontology_enrichment_celltype=CL:0000066!6.90e-32!254;CL:0002321!2.10e-07!248;CL:0000220!7.13e-07!246 | |ontology_enrichment_celltype=CL:0000066!6.90e-32!254;CL:0002321!2.10e-07!248;CL:0000220!7.13e-07!246 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,7.75e-32,253 | |||
|ontology_enrichment_development_v019=UBERON:0008947;5.84e-08;29 | |||
|ontology_enrichment_disease=DOID:305!1.34e-20!106;DOID:0050687!5.07e-19!143;DOID:14566!1.89e-09!239;DOID:162!1.94e-09!235 | |ontology_enrichment_disease=DOID:305!1.34e-20!106;DOID:0050687!5.07e-19!143;DOID:14566!1.89e-09!239;DOID:162!1.94e-09!235 | ||
|ontology_enrichment_disease_v019=DOID:305;2.79e-07;106 | |||
|ontology_enrichment_disease_v019_2=DOID:305,1.28e-20,106;DOID:0050687,1.61e-18,143;DOID:162,2.39e-10,235;DOID:14566,2.96e-10,239 | |||
|ontology_enrichment_uberon=UBERON:0004119!2.56e-17!169;UBERON:0000925!2.56e-17!169;UBERON:0006595!2.56e-17!169;UBERON:0001007!1.79e-16!155;UBERON:0001555!1.79e-16!155;UBERON:0007026!1.79e-16!155;UBERON:0000077!8.55e-14!130;UBERON:0004921!3.54e-13!129;UBERON:0004185!3.54e-13!129;UBERON:0003104!8.14e-11!238;UBERON:0009142!8.14e-11!238;UBERON:0005177!2.85e-09!107;UBERON:0000464!6.57e-09!104;UBERON:0000466!8.18e-09!126;UBERON:0001041!1.05e-08!98;UBERON:0002100!1.82e-08!216;UBERON:0005409!2.63e-08!35;UBERON:0000160!4.47e-08!27;UBERON:0000481!1.08e-07!347;UBERON:0000062!1.88e-07!511;UBERON:0008947!2.16e-07!38;UBERON:0003258!2.16e-07!38;UBERON:0001048!5.65e-07!168;UBERON:0005631!9.66e-07!14;UBERON:0000158!9.66e-07!14 | |ontology_enrichment_uberon=UBERON:0004119!2.56e-17!169;UBERON:0000925!2.56e-17!169;UBERON:0006595!2.56e-17!169;UBERON:0001007!1.79e-16!155;UBERON:0001555!1.79e-16!155;UBERON:0007026!1.79e-16!155;UBERON:0000077!8.55e-14!130;UBERON:0004921!3.54e-13!129;UBERON:0004185!3.54e-13!129;UBERON:0003104!8.14e-11!238;UBERON:0009142!8.14e-11!238;UBERON:0005177!2.85e-09!107;UBERON:0000464!6.57e-09!104;UBERON:0000466!8.18e-09!126;UBERON:0001041!1.05e-08!98;UBERON:0002100!1.82e-08!216;UBERON:0005409!2.63e-08!35;UBERON:0000160!4.47e-08!27;UBERON:0000481!1.08e-07!347;UBERON:0000062!1.88e-07!511;UBERON:0008947!2.16e-07!38;UBERON:0003258!2.16e-07!38;UBERON:0001048!5.65e-07!168;UBERON:0005631!9.66e-07!14;UBERON:0000158!9.66e-07!14 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,5.21e-14,160;UBERON:0000925,5.21e-14,160;UBERON:0006595,5.21e-14,160;UBERON:0001007,4.79e-13,145;UBERON:0001555,4.79e-13,145;UBERON:0007026,4.79e-13,145;UBERON:0004921,4.38e-10,118;UBERON:0005177,6.19e-10,101;UBERON:0001008,7.76e-08,48;UBERON:0002100,9.88e-08,199;UBERON:0006554,1.28e-07,47;UBERON:0008947,1.88e-07,38;UBERON:0003258,1.88e-07,38;UBERON:0005631,4.26e-07,14;UBERON:0000158,4.26e-07,14 | |||
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| ||
|short_description=p1@VSIG10 | |short_description=p1@VSIG10 | ||
}} | }} |
Latest revision as of 17:13, 16 September 2015
Short description: | p1@VSIG10 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_VSIG10_5end |
Coexpression cluster: | C45_testicular_choriocarcinoma_H9_teratocarcinoma_Wilms_pancreatic_iPS |
Association with transcript: | 0bp_to_ENST00000536905, NM_019086, uc001tws.2, uc001twt.2_5end |
EntrezGene: | VSIG10 |
HGNC: | 26078 |
UniProt: | Q8N0Z9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 7.75e-32 | 253 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 5.21e-14 | 160 |
endoderm | 5.21e-14 | 160 |
presumptive endoderm | 5.21e-14 | 160 |
digestive system | 4.79e-13 | 145 |
digestive tract | 4.79e-13 | 145 |
primitive gut | 4.79e-13 | 145 |
subdivision of digestive tract | 4.38e-10 | 118 |
trunk region element | 6.19e-10 | 101 |
renal system | 7.76e-08 | 48 |
trunk | 9.88e-08 | 199 |
urinary system structure | 1.28e-07 | 47 |
respiratory primordium | 1.88e-07 | 38 |
endoderm of foregut | 1.88e-07 | 38 |
extraembryonic membrane | 4.26e-07 | 14 |
membranous layer | 4.26e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.28e-20 | 106 |
cell type cancer | 1.61e-18 | 143 |
cancer | 2.39e-10 | 235 |
disease of cellular proliferation | 2.96e-10 | 239 |