FFCP PHASE1:Hg19::chr2:120517517..120517541,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5775 | |EntrezGene=5775 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9656 | |HGNC=9656 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000460162_5end | |association_with_transcript=0bp_to_ENST00000460162_5end | ||
|cluster_id=chr2:120517517..120517541,+ | |||
|coexpression_cluster_id=C2306 | |coexpression_cluster_id=C2306 | ||
|description=CAGE_peak_2_at_PTPN4_5end | |description=CAGE_peak_2_at_PTPN4_5end | ||
|id=chr2:120517517..120517541,+ | |id=chr2:120517517..120517541,+ | ||
|ontology_enrichment_celltype=CL:0000791;2.66e-13;18!CL:0000789;2.66e-13;18!CL:0002419;2.66e-13;18!CL:0000084;3.27e-12;25!CL:0000542;1.65e-09;53!CL:0000625;6.42e-09;11 | |ontology_enrichment_celltype=CL:0000542!1.38e-15!53;CL:0000051!1.38e-15!53;CL:0000838!3.02e-15!52;CL:0000791!8.76e-13!18;CL:0000789!8.76e-13!18;CL:0002420!8.76e-13!18;CL:0002419!8.76e-13!18;CL:0000790!8.76e-13!18;CL:0000084!8.70e-12!25;CL:0000827!8.70e-12!25;CL:0000625!1.36e-08!11 | ||
| | |ontology_enrichment_celltype_v019=CL:0000791;2.66e-13;18!CL:0000789;2.66e-13;18!CL:0002419;2.66e-13;18!CL:0000084;3.27e-12;25!CL:0000542;1.65e-09;53!CL:0000625;6.42e-09;11 | ||
|ontology_enrichment_celltype_v019_2=CL:0000542,9.57e-16,53;CL:0000051,9.57e-16,53;CL:0000838,2.13e-15,52;CL:0000791,3.98e-13,18;CL:0000789,3.98e-13,18;CL:0002420,3.98e-13,18;CL:0002419,3.98e-13,18;CL:0000790,3.98e-13,18;CL:0000084,4.24e-12,25;CL:0000827,4.24e-12,25;CL:0000625,8.30e-09,11 | |||
|ontology_enrichment_development_v019=CL:0000790;2.66e-13;18!CL:0000051;1.65e-09;53 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!8.29e-12!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,3.32e-12,114 | |||
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| ||
|short_description=p2@PTPN4 | |short_description=p2@PTPN4 | ||
}} | }} |
Latest revision as of 17:13, 16 September 2015
Short description: | p2@PTPN4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PTPN4_5end |
Coexpression cluster: | C2306_CD4_CD8_cerebellum_Mast_Neural_thymus_Natural |
Association with transcript: | 0bp_to_ENST00000460162_5end |
EntrezGene: | PTPN4 |
HGNC: | 9656 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 9.57e-16 | 53 |
common lymphoid progenitor | 9.57e-16 | 53 |
lymphoid lineage restricted progenitor cell | 2.13e-15 | 52 |
mature alpha-beta T cell | 3.98e-13 | 18 |
alpha-beta T cell | 3.98e-13 | 18 |
immature T cell | 3.98e-13 | 18 |
mature T cell | 3.98e-13 | 18 |
immature alpha-beta T cell | 3.98e-13 | 18 |
T cell | 4.24e-12 | 25 |
pro-T cell | 4.24e-12 | 25 |
CD8-positive, alpha-beta T cell | 8.30e-09 | 11 |
Ontology term | p-value | n |
---|---|---|
adult organism | 3.32e-12 | 114 |