FFCP PHASE1:Hg19::chr20:4680733..4680761,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5621 | |EntrezGene=5621 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=9449 | |HGNC=9449 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=63bp_to_BC016809_5end | |association_with_transcript=63bp_to_BC016809_5end | ||
|cluster_id=chr20:4680733..4680761,+ | |||
|coexpression_cluster_id=C707 | |||
|description=CAGE_peak_12_at_PRNP_5end | |description=CAGE_peak_12_at_PRNP_5end | ||
|id=chr20:4680733..4680761,+ | |id=chr20:4680733..4680761,+ | ||
|ontology_enrichment_celltype=CL:0002057!7.35e-07!42 | |ontology_enrichment_celltype=CL:0002057!7.35e-07!42 | ||
|ontology_enrichment_celltype_v019=CL:0000473;1.27e-08;39!CL:0000234;1.27e-08;39!CL:0000860;1.34e-07;33!CL:0002057;1.34e-07;33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,2.69e-08,48;CL:0000234,2.69e-08,48;CL:0000860,7.16e-07,42;CL:0002057,7.16e-07,42 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:2394;2.96e-07;14!DOID:0060084;4.23e-07;3!DOID:127;4.23e-07;3 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,2.77e-07,14;DOID:0060084,4.40e-07,3;DOID:127,4.40e-07,3 | |||
|ontology_enrichment_uberon=UBERON:0000062!5.14e-11!511;UBERON:0000480!1.78e-09!626;UBERON:0000467!1.83e-09!625;UBERON:0001049!2.05e-08!57;UBERON:0005068!2.05e-08!57;UBERON:0006241!2.05e-08!57;UBERON:0007135!2.05e-08!57;UBERON:0000468!1.85e-07!659;UBERON:0002050!6.35e-07!605;UBERON:0005423!6.35e-07!605;UBERON:0007023!6.64e-07!115;UBERON:0000923!7.83e-07!604;UBERON:0005291!7.83e-07!604;UBERON:0006598!7.83e-07!604;UBERON:0002532!7.83e-07!604 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,6.28e-07,56;UBERON:0005068,6.28e-07,56;UBERON:0006241,6.28e-07,56;UBERON:0007135,6.28e-07,56 | |||
|phase1_expression=0.363356758541113,1.2846031433459,0.140954404095971,3.00219895059391,0.893922188854576,0.872338524100369,0,1.26343974685366,1.04474251279935,0,0,0.436882744260345,0,0.123766352960047,0.331397375727916,0.672325146451775,1.20538905604795,0,0.487932798790507,0.246242116153576,0.408001382488506,0,0.286235987131057,0.273748850145768,0.251085279189606,0,0.0821005894499457,0,0,0,0.154816123316076,0.919421224478927,0.30120591877825,0.369754010166788,0,0.426507697462265,0.293600439334847,1.10799081706375,0.802177789880567,0,0.447830948479849,0.32389366601898,0.257575567634187,0.726991193897824,0.377875943688809,0.242584061187816,0.464858073811369,1.6446715520873,0.929119112685311,2.01384674625505,2.56160706529101,0.945928919554341,0.344745680736619,1.29096936716765,1.35426486594342,0.752969358170419,0.818718450173537,0.674170453335254,2.14258724659632,0.641858054152187,1.27867425159808,1.64925650093358,0.199463657621632,0.426224750532694,1.45104619314292,1.13477044938228,1.24564449799115,2.51248665256743,2.08593167368081,1.73751075764093,1.81619850790011,0.368277635987565,0.316462387440884,0.422510572623884,0.212604299965044,0,0,0.150176892841506,0,0,0,0.182664153764634,0,0,0,0.426730222566507,0,0,0,0.954053754535364,0,0.587237189370939,0.382273228125229,1.32171328579026,0.560508562981536,0,0.196709770113833,0.786021525498329,0.411202997999018,0,0.651844533267181,0,0,0.111410456885174,0,0.221533894583621,0.541607727530031,0.128091319725675,0.260118695119756,0.164437904603676,0.276350017785848,0,0,0,0,0.113309342697566,0.383220493601921,0.34362744548263,0.506039384039006,0,0,0,0,0.127986611154418,0,0,0,0.201606743224732,0.267440195783507,0.144824403882799,0,0,0.12786256184353,0.361439152384566,0,0.434539556882471,0,0,0,0,0.087834785693126,0.0654895377488563,1.09288586487763,1.48313777113772,0,0,0.132957960518865,0,0,0,0.39752481473341,0,0,0,0.419499436209906,0,0,0.258416759169329,0.35576626268671,0.33472061276467,0.402829317109147,0,0.24406205754817,0.367663080345869,0,0,0,0.112611480483322,0,0,0,0,0,0,1.49091585508596,0.25326102332916,1.45650098894541,2.0078563452417,1.06400514659507,0,0,0.49333509683432,0.622422070799533,0.134710672069688,0.163461903113459,0.151357427644931,0,0,1.5608003841516,0,0.597794722207204,0.117434498643765,0.161872944368132,0,0,0.368502951935304,0.103325781175765,0,0.989067717114227,0.910161361938026,0,0,0.125118519871964,0,0,0,0,0,0.358779271377724,0.213557388818567,0.847727604638247,0.900273288253207,0.309157587715317,0.515281080091258,0.18611685633159,0.337552664482532,0.68205903612839,0.504867548488229,0.184099797284599,0.80823028409406,1.06502877754984,0.302256294682921,0.339121184620975,0.773043412653187,0.545492241181669,0.573609190778008,0,0,0,0.207322110030741,0,0,0,0,0,0.464367928031979,0.721879481669586,0.591534000199219,0.337169380156203,0,0.220587945464788,0.653638332277218,0,0.134831308160164,0,0.38474715694639,0,0,0,0,0,0.982827216677626,0,0,0.245976877086227,0.171567810298526,0.878002283269004,0,1.3068766413512,0.462942225792648,0,0,0,0.115930404975077,0,0,0,0,0,0,1.23108503043699,0,0.594524649154913,0,1.34385702559088,0.992425680696705,1.34337784054272,1.16253575405585,0.383382679165211,0.492663237895943,0,0.414656231081544,0.288239906833923,0.12624243342638,0,0,0,0,0.616964956219941,0.901029173531752,0,0,0.43596006883328,0.22001485746285,0.517086863031111,0,0,2.12750493267896,0,0,0,0,0.428933980974443,0.542621605391443,0,0.325736184293735,0.710783897485092,0,4.52159065589379,0,5.29856853264902,1.2162378064119,2.00902836572851,0,0,0,0,0.434343920002738,0.205476322550383,0.179060963239896,0.112085143993527,0,0.862510299438069,0.513372145118994,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0.623912584592421,3.03329280955175,1.10391690523754,0.819989904948992,0.300946099727719,0,1.03473071292505,0,0,0.260650843404249,0.195801157462741,0,0.620304078368662,0.431428401637234,0.213455115606889,0,0,0,0,0.153461973288062,0.841980283299221,0.768834895534206,1.02341449813341,0.321707842287215,0,0.616838775210622,0.532685175939381,0.0821271560138091,1.55776328755086,0.116210378459959,0.362578348774867,2.6065841139427,2.85451065701279,0.803701137152247,1.0925470080403,1.18011973463482,0,0.231046011313244,0,0,0.105551628892876,0,0.170093705276516,0.215915916102139,0,0,0,0.254876273045038,0.831076008928724,0.223874754722178,0,0,0,0,0.650756789328606,0.103041011647722,0.183138929636687,0.247528499761764,0,0.650060246036521,4.82051789532479,0.386682873168488,0.308097234229289,0,0.137836572484531,0.214840489736547,0,0.0852266274161009,0.0890320356467374,2.14870389969272,1.34533047155574,0.127612712494584,1.71968227454435,0,2.20368642781448,0,0,0,0,0.18532421910392,0.429374660225974,0,0,0.571890581771475,0,0.855877976067841,0.318203247925937,0,0.359744915166629,0.274537029736055,0.235624804691373,0.606547444719948,0,1.26377536871694,0,3.89941583410055,1.05650146756755,0.409499734223957,0.848432591722276,1.13008116620243,0.551365343546124,1.99031692572366,0.438450885253763,0,0.65589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|phase1_expression=0.363356758541113,1.2846031433459,0.140954404095971,3.00219895059391,0.893922188854576,0.872338524100369,0,1.26343974685366,1.04474251279935,0,0,0.436882744260345,0,0.123766352960047,0.331397375727916,0.672325146451775,1.20538905604795,0,0.487932798790507,0.246242116153576,0.408001382488506,0,0.286235987131057,0.273748850145768,0.251085279189606,0,0.0821005894499457,0,0,0,0.154816123316076,0.919421224478927,0.30120591877825,0.369754010166788,0,0.426507697462265,0.293600439334847,1.10799081706375,0.802177789880567,0,0.447830948479849,0.32389366601898,0.257575567634187,0.726991193897824,0.377875943688809,0.242584061187816,0.464858073811369,1.6446715520873,0.929119112685311,2.01384674625505,2.56160706529101,0.945928919554341,0.344745680736619,1.29096936716765,1.35426486594342,0.752969358170419,0.818718450173537,0.674170453335254,2.14258724659632,0.641858054152187,1.27867425159808,1.64925650093358,0.199463657621632,0.426224750532694,1.45104619314292,1.13477044938228,1.24564449799115,2.51248665256743,2.08593167368081,1.73751075764093,1.81619850790011,0.368277635987565,0.316462387440884,0.422510572623884,0.212604299965044,0,0,0.150176892841506,0,0,0,0.182664153764634,0,0,0,0.426730222566507,0,0,0,0.954053754535364,0,0.587237189370939,0.382273228125229,1.32171328579026,0.560508562981536,0,0.196709770113833,0.786021525498329,0.411202997999018,0,0.651844533267181,0,0,0.111410456885174,0,0.221533894583621,0.541607727530031,0.128091319725675,0.260118695119756,0.164437904603676,0.276350017785848,0,0,0,0,0.113309342697566,0.383220493601921,0.34362744548263,0.506039384039006,0,0,0,0,0.127986611154418,0,0,0,0.201606743224732,0.267440195783507,0.144824403882799,0,0,0.12786256184353,0.361439152384566,0,0.434539556882471,0,0,0,0,0.087834785693126,0.0654895377488563,1.09288586487763,1.48313777113772,0,0,0.132957960518865,0,0,0,0.39752481473341,0,0,0,0.419499436209906,0,0,0.258416759169329,0.35576626268671,0.33472061276467,0.402829317109147,0,0.24406205754817,0.367663080345869,0,0,0,0.112611480483322,0,0,0,0,0,0,1.49091585508596,0.25326102332916,1.45650098894541,2.0078563452417,1.06400514659507,0,0,0.49333509683432,0.622422070799533,0.134710672069688,0.163461903113459,0.151357427644931,0,0,1.5608003841516,0,0.597794722207204,0.117434498643765,0.161872944368132,0,0,0.368502951935304,0.103325781175765,0,0.989067717114227,0.910161361938026,0,0,0.125118519871964,0,0,0,0,0,0.358779271377724,0.213557388818567,0.847727604638247,0.900273288253207,0.309157587715317,0.515281080091258,0.18611685633159,0.337552664482532,0.68205903612839,0.504867548488229,0.184099797284599,0.80823028409406,1.06502877754984,0.302256294682921,0.339121184620975,0.773043412653187,0.545492241181669,0.573609190778008,0,0,0,0.207322110030741,0,0,0,0,0,0.464367928031979,0.721879481669586,0.591534000199219,0.337169380156203,0,0.220587945464788,0.653638332277218,0,0.134831308160164,0,0.38474715694639,0,0,0,0,0,0.982827216677626,0,0,0.245976877086227,0.171567810298526,0.878002283269004,0,1.3068766413512,0.462942225792648,0,0,0,0.115930404975077,0,0,0,0,0,0,1.23108503043699,0,0.594524649154913,0,1.34385702559088,0.992425680696705,1.34337784054272,1.16253575405585,0.383382679165211,0.492663237895943,0,0.414656231081544,0.288239906833923,0.12624243342638,0,0,0,0,0.616964956219941,0.901029173531752,0,0,0.43596006883328,0.22001485746285,0.517086863031111,0,0,2.12750493267896,0,0,0,0,0.428933980974443,0.542621605391443,0,0.325736184293735,0.710783897485092,0,4.52159065589379,0,5.29856853264902,1.2162378064119,2.00902836572851,0,0,0,0,0.434343920002738,0.205476322550383,0.179060963239896,0.112085143993527,0,0.862510299438069,0.513372145118994,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0.623912584592421,3.03329280955175,1.10391690523754,0.819989904948992,0.300946099727719,0,1.03473071292505,0,0,0.260650843404249,0.195801157462741,0,0.620304078368662,0.431428401637234,0.213455115606889,0,0,0,0,0.153461973288062,0.841980283299221,0.768834895534206,1.02341449813341,0.321707842287215,0,0.616838775210622,0.532685175939381,0.0821271560138091,1.55776328755086,0.116210378459959,0.362578348774867,2.6065841139427,2.85451065701279,0.803701137152247,1.0925470080403,1.18011973463482,0,0.231046011313244,0,0,0.105551628892876,0,0.170093705276516,0.215915916102139,0,0,0,0.254876273045038,0.831076008928724,0.223874754722178,0,0,0,0,0.650756789328606,0.103041011647722,0.183138929636687,0.247528499761764,0,0.650060246036521,4.82051789532479,0.386682873168488,0.308097234229289,0,0.137836572484531,0.214840489736547,0,0.0852266274161009,0.0890320356467374,2.14870389969272,1.34533047155574,0.127612712494584,1.71968227454435,0,2.20368642781448,0,0,0,0,0.18532421910392,0.429374660225974,0,0,0.571890581771475,0,0.855877976067841,0.318203247925937,0,0.359744915166629,0.274537029736055,0.235624804691373,0.606547444719948,0,1.26377536871694,0,3.89941583410055,1.05650146756755,0.409499734223957,0.848432591722276,1.13008116620243,0.551365343546124,1.99031692572366,0.438450885253763,0,0.65589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| ||
|short_description=p12@PRNP | |short_description=p12@PRNP | ||
}} | }} |
Latest revision as of 17:14, 16 September 2015
Short description: | p12@PRNP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_PRNP_5end |
Coexpression cluster: | C707_medial_leiomyoma_mesenchymal_Mesothelial_Mast_CD14_occipital |
Association with transcript: | 63bp_to_BC016809_5end |
EntrezGene: | PRNP |
HGNC: | 9449 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 2.69e-08 | 48 |
phagocyte | 2.69e-08 | 48 |
classical monocyte | 7.16e-07 | 42 |
CD14-positive, CD16-negative classical monocyte | 7.16e-07 | 42 |
Ontology term | p-value | n |
---|---|---|
neural tube | 6.28e-07 | 56 |
neural rod | 6.28e-07 | 56 |
future spinal cord | 6.28e-07 | 56 |
neural keel | 6.28e-07 | 56 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 2.77e-07 | 14 |
cell type benign neoplasm | 4.40e-07 | 3 |
leiomyoma | 4.40e-07 | 3 |