FFCP PHASE1:Hg19::chr5:167181984..167182000,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr5:167181984..167182000,+ to FFCP PHASE1:Hg19::chr5:167181984..167182000,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=57451 | |EntrezGene=57451 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29943 | |HGNC=29943 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_uc003lzq.2,uc003lzr.3_5end | |||
|cluster_id=chr5:167181984..167182000,+ | |||
|coexpression_cluster_id=C1955 | |||
|description=CAGE_peak_9_at_ODZ2_5end | |||
|id=chr5:167181984..167182000,+ | |||
|ontology_enrichment_celltype=CL:0002620!1.50e-18!23;CL:0000057!6.98e-10!75;CL:0000055!2.72e-09!180;CL:0002559!1.24e-08!4;CL:0000306!3.33e-08!4;CL:0002222!3.33e-08!4;CL:0002224!3.33e-08!4;CL:0000064!3.60e-07!3;CL:0005012!3.60e-07!3;CL:0000067!3.60e-07!3;CL:0002304!3.60e-07!3;CL:0000346!4.05e-07!3;CL:1000428!4.05e-07!3;CL:0000062!4.41e-07!11;CL:0000375!4.41e-07!11;CL:0000335!4.41e-07!11;CL:0002603!9.62e-07!3;CL:0000128!9.65e-07!7;CL:0000126!9.65e-07!7;CL:0000127!9.65e-07!7;CL:0002453!9.65e-07!7 | |||
|ontology_enrichment_celltype_v019=CL:0002620;3.08e-28;23!CL:0000064;1.30e-13;3!CL:0000067;1.30e-13;3!CL:0005012;1.30e-13;3!CL:0002304;1.30e-13;3!CL:0000346;2.28e-13;3!CL:1000428;2.28e-13;3!CL:0002603;6.40e-13;3!CL:0000306;1.48e-09;4!CL:0002222;1.48e-09;4!CL:0002224;1.48e-09;4!CL:0000128;1.63e-09;7!CL:0000126;1.63e-09;7!CL:0000127;1.63e-09;7!CL:0000077;3.72e-09;19!CL:0002559;3.45e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002620,2.27e-28,23;CL:0000064,1.25e-13,3;CL:0000067,1.25e-13,3;CL:0005012,1.25e-13,3;CL:0002304,1.25e-13,3;CL:0000346,1.61e-13,3;CL:1000428,1.61e-13,3;CL:0002603,1.02e-12,3;CL:0000057,8.60e-12,76;CL:0000306,1.41e-09,4;CL:0002222,1.41e-09,4;CL:0002224,1.41e-09,4;CL:0000128,1.93e-09,7;CL:0000126,1.93e-09,7;CL:0000127,1.93e-09,7;CL:0002453,1.93e-09,7;CL:0000077,3.58e-09,19;CL:0002559,2.81e-08,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:17!1.21e-10!5;DOID:450!1.21e-10!5;DOID:66!1.21e-10!5;DOID:423!1.21e-10!5;DOID:0080000!1.21e-10!5;DOID:11722!1.21e-10!5 | |||
|ontology_enrichment_disease_v019=DOID:17;5.47e-21;5!DOID:450;5.47e-21;5!DOID:66;5.47e-21;5!DOID:423;5.47e-21;5!DOID:0080000;5.47e-21;5!DOID:11722;5.47e-21;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,4.37e-21,5;DOID:450,4.37e-21,5;DOID:66,4.37e-21,5;DOID:423,4.37e-21,5;DOID:0080000,4.37e-21,5;DOID:11722,4.37e-21,5;DOID:7,4.42e-07,39 | |||
|ontology_enrichment_uberon=UBERON:0002097!1.87e-16!40;UBERON:0002199!6.54e-14!45;UBERON:0002416!6.54e-14!45;UBERON:0001801!2.49e-12!14;UBERON:0000033!4.69e-11!123;UBERON:0007625!8.67e-11!11;UBERON:0003102!1.76e-10!95;UBERON:0000475!3.18e-10!365;UBERON:0005085!4.34e-10!29;UBERON:0000153!4.39e-10!129;UBERON:0007811!4.39e-10!129;UBERON:0000924!3.87e-09!173;UBERON:0006601!3.87e-09!173;UBERON:0000488!5.09e-09!4;UBERON:0001456!7.19e-09!21;UBERON:0002073!1.24e-08!4;UBERON:0005086!1.24e-08!4;UBERON:0000019!1.97e-08!19;UBERON:0000047!1.97e-08!19;UBERON:0004088!1.97e-08!19;UBERON:0003072!1.97e-08!19;UBERON:0003071!1.97e-08!19;UBERON:0004128!1.97e-08!19;UBERON:0010077!3.33e-08!4;UBERON:0005389!3.33e-08!4;UBERON:0000484!3.33e-08!4;UBERON:0002546!3.33e-08!4;UBERON:0000965!3.33e-08!4;UBERON:0001803!3.33e-08!4;UBERON:0003073!3.33e-08!4;UBERON:0005426!3.33e-08!4;UBERON:0002346!4.80e-08!90;UBERON:0000020!5.36e-08!23;UBERON:0000970!6.85e-08!20;UBERON:0004121!9.01e-08!169;UBERON:0001032!1.49e-07!24;UBERON:0004456!1.49e-07!24;UBERON:0003056!1.67e-07!61;UBERON:0002104!2.11e-07!21;UBERON:0001778!3.60e-07!3;UBERON:0001775!3.60e-07!3;UBERON:0000412!4.05e-07!3;UBERON:0001992!4.05e-07!3;UBERON:0001444!7.01e-07!48 | |||
|ontology_enrichment_uberon_v019=UBERON:0002097;3.01e-20;41!UBERON:0007625;1.06e-17;11!UBERON:0000488;1.47e-17;4!UBERON:0002199;2.11e-14;46!UBERON:0002416;2.11e-14;46!UBERON:0001801;1.08e-13;14!UBERON:0001778;1.30e-13;3!UBERON:0001775;1.30e-13;3!UBERON:0000412;2.28e-13;3!UBERON:0001992;2.28e-13;3!UBERON:0003102;1.84e-12;50!UBERON:0002203;9.96e-12;6!UBERON:0001768;9.96e-12;6!UBERON:0002200;9.96e-12;6!UBERON:0010371;4.51e-11;31!UBERON:0000020;3.38e-10;23!UBERON:0000019;7.94e-10;19!UBERON:0000047;7.94e-10;19!UBERON:0004088;7.94e-10;19!UBERON:0010230;7.94e-10;19!UBERON:0001032;1.02e-09;24!UBERON:0004456;1.02e-09;24!UBERON:0010077;1.48e-09;4!UBERON:0005389;1.48e-09;4!UBERON:0000484;1.48e-09;4!UBERON:0000965;1.48e-09;4!UBERON:0001803;1.48e-09;4!UBERON:0000970;2.76e-09;20!UBERON:0002104;8.53e-09;21!UBERON:0001456;8.53e-09;21!UBERON:0002073;3.45e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002097,1.10e-25,41;UBERON:0002199,1.94e-22,46;UBERON:0002416,1.94e-22,46;UBERON:0007625,9.68e-18,11;UBERON:0000488,1.35e-17,4;UBERON:0001801,1.01e-13,14;UBERON:0001778,1.25e-13,3;UBERON:0001775,1.25e-13,3;UBERON:0000412,1.61e-13,3;UBERON:0001992,1.61e-13,3;UBERON:0003102,5.48e-12,99;UBERON:0002203,9.44e-12,6;UBERON:0001768,9.44e-12,6;UBERON:0002200,9.44e-12,6;UBERON:0005085,1.31e-11,31;UBERON:0000020,1.01e-09,24;UBERON:0001032,1.01e-09,24;UBERON:0004456,1.01e-09,24;UBERON:0010077,1.41e-09,4;UBERON:0005389,1.41e-09,4;UBERON:0000484,1.41e-09,4;UBERON:0002546,1.41e-09,4;UBERON:0000965,1.41e-09,4;UBERON:0001803,1.41e-09,4;UBERON:0003073,1.41e-09,4;UBERON:0005426,1.41e-09,4;UBERON:0000019,2.64e-09,20;UBERON:0000047,2.64e-09,20;UBERON:0010312,2.64e-09,20;UBERON:0004088,2.64e-09,20;UBERON:0010230,2.64e-09,20;UBERON:0003072,2.64e-09,20;UBERON:0004128,2.64e-09,20;UBERON:0003071,2.64e-09,20;UBERON:0000970,8.17e-09,21;UBERON:0002104,8.17e-09,21;UBERON:0001456,2.28e-08,22;UBERON:0002073,2.81e-08,5;UBERON:0005086,2.81e-08,5 | |||
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| ||
|short_description=p9@ODZ2 | |||
}} | }} |
Latest revision as of 19:14, 16 September 2015
Short description: | p9@ODZ2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_ODZ2_5end |
Coexpression cluster: | C1955_Fibroblast_osteoclastoma_Mallassezderived_mesothelioma_pagetoid_mesenchymal_Mesothelial |
Association with transcript: | 0bp_to_uc003lzq.2, uc003lzr.3_5end |
EntrezGene: | ODZ2 |
HGNC: | 29943 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 2.27e-28 | 23 |
ciliated cell | 1.25e-13 | 3 |
ciliated epithelial cell | 1.25e-13 | 3 |
multi-ciliated epithelial cell | 1.25e-13 | 3 |
non-pigmented ciliary epithelial cell | 1.25e-13 | 3 |
hair follicle dermal papilla cell | 1.61e-13 | 3 |
stem cell of epidermis | 1.61e-13 | 3 |
astrocyte of the cerebellum | 1.02e-12 | 3 |
fibroblast | 8.60e-12 | 76 |
crystallin accumulating cell | 1.41e-09 | 4 |
vertebrate lens cell | 1.41e-09 | 4 |
lens epithelial cell | 1.41e-09 | 4 |
oligodendrocyte | 1.93e-09 | 7 |
macroglial cell | 1.93e-09 | 7 |
astrocyte | 1.93e-09 | 7 |
oligodendrocyte precursor cell | 1.93e-09 | 7 |
mesothelial cell | 3.58e-09 | 19 |
hair follicle cell | 2.81e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 4.37e-21 | 5 |
myotonic disease | 4.37e-21 | 5 |
muscle tissue disease | 4.37e-21 | 5 |
myopathy | 4.37e-21 | 5 |
muscular disease | 4.37e-21 | 5 |
myotonic dystrophy | 4.37e-21 | 5 |
disease of anatomical entity | 4.42e-07 | 39 |