FFCP PHASE1:Hg19::chr12:120731032..120731051,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr12:120731032..120731051,- to FFCP PHASE1:Hg19::chr12:120731032..120731051,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=10192 | |HGNC=10192 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000363925_5end | |||
|cluster_id=chr12:120731032..120731051,- | |||
|coexpression_cluster_id=C2188 | |||
|description=CAGE_peak_1_at_RNU4-1_5end | |||
|id=chr12:120731032..120731051,- | |||
|ontology_enrichment_celltype=CL:0000860!3.20e-18!45;CL:0002057!2.44e-17!42;CL:0000037!4.55e-13!172;CL:0000566!4.55e-13!172;CL:0002032!1.34e-12!165;CL:0000837!1.34e-12!165;CL:0002087!3.76e-11!119;CL:0002009!5.31e-11!65;CL:0000763!5.41e-11!112;CL:0000049!5.41e-11!112;CL:0002031!5.73e-11!124;CL:0000988!1.10e-10!182;CL:0002194!1.15e-10!63;CL:0000576!1.15e-10!63;CL:0000040!1.15e-10!63;CL:0000559!1.15e-10!63;CL:0000557!9.00e-10!71;CL:0000738!1.11e-09!140;CL:0000839!3.35e-09!70;CL:0000766!1.30e-08!76 | |||
|ontology_enrichment_celltype_v019=CL:0000860;4.32e-15;33!CL:0002057;4.32e-15;33!CL:0000473;8.69e-12;39!CL:0000234;8.69e-12;39!CL:0000576;9.29e-09;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,4.72e-18,42;CL:0002057,4.72e-18,42;CL:0000473,6.81e-17,48;CL:0000234,6.81e-17,48;CL:0000037,1.87e-12,168;CL:0002032,4.15e-12,161;CL:0000837,4.15e-12,161;CL:0002087,4.88e-11,115;CL:0002009,1.26e-10,61;CL:0002031,2.12e-10,120;CL:0000988,2.54e-10,177;CL:0002194,2.84e-10,59;CL:0000576,2.84e-10,59;CL:0000040,2.84e-10,59;CL:0000559,2.84e-10,59;CL:0000763,2.91e-10,108;CL:0000049,2.91e-10,108;CL:0000557,3.94e-09,67;CL:0000738,4.21e-09,136;CL:0000839,2.15e-08,66;CL:0000766,3.63e-08,72 | |||
|ontology_enrichment_development_v019=CL:0002057;1.64e-13;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!2.49e-08!80;UBERON:0001474!8.19e-07!86 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,9.54e-08,76 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0.140954404095971,0,0,0,30.3959853801973,0,1.04474251279935,0,5.58240934377942,0,1.31883489114227,0,3.31397375727916,10.7572023432284,12.6565850885035,13.1455816269727,25.3725055371064,0,2.24400760368678,2.82109249330279,0,3.01123735160345,1.88313959392204,10.8507036162091,8.29215953444452,12.1214603223066,7.08055698328027,2.30297638858328,8.82451902901633,4.59710612239464,6.024118375565,1.10926203050036,0,0,15.8544237240817,0,2.80762226458198,4.55722828503289,0,0,0,69.7911546141911,18.1380452970629,92.1819432513702,92.5067566884625,27.5482484974623,49.5530193432166,169.163126685424,78.897497610963,8.98632473576624,65.1569336592209,39.3745656986134,12.1883837934908,78.4970555892662,22.6512104548012,2.9214052977861,129.167402580521,1.92557416245656,77.999129347483,131.280817474313,31.7147215618395,49.4420710617925,103.604698190404,26.6671055604836,108.37107132523,70.6008749371449,53.7127405972807,6.08128765174327,46.6157617027694,1.84138817993782,12.0255707227536,6.12640330304631,5.10250319916104,15.5147397676198,10.1095768031846,5.70672192797724,0.48217676009124,33.0614782739848,19.891667719909,15.8917813775232,12.3197371122926,12.561188059029,4.44754626931777,33.2849573601876,12.0118796110804,4.59801951963587,5.94940385506376,12.4026988089597,2.27685187643779,3.52342313622563,24.8477598281399,9.25199300053181,3.92355994087075,27.391944816608,0,3.93010762749165,1.23360899399706,6.35308682484577,20.2071805312826,15.1503297835115,46.7584148178987,3.45372416344038,13.5518717438425,13.5135675696009,1.89562704635511,102.601147100266,109.770089340537,108.035703324615,60.2443038773149,0.289803085735052,7.1177550317789,6.95606153033254,42.8595647600405,3.73920830901968,16.0952607312807,12.026960591892,1.26509846009751,6.05274287215784,8.46408490013344,4.75226022224187,0.602300476311091,0.639933055772092,0,3.07810427657222,6.56902397536837,0,2.40696176205157,1.44824403882799,4.87613732627923,2.01210257911091,4.09160197899297,0,0,2.462390822334,0,2.43317435151318,0,1.55210578223795,2.98638271356629,0,0,1.48313777113772,0,0.348259474598534,2.39324328933957,0.715471872916026,4.57595928624102,4.45749001595478,0,16.3444573070164,0,1.13061588384802,12.1654836500873,1.6507082516404,5.43386912995707,0.516833518338658,0,0,0,0,8.29810995663776,0,4.0507097394088,0.0892997282840798,0.898117490504679,1.0135033243499,19.9311628705648,0,6.04565754970344,0,3.87780264148325,0,1.98788780678127,0,9.26864265692532,2.58152958673932,2.4826786753885,6.72813120170769,0,2.71334303258876,0,1.61652806483626,0.980771418680752,0,3.45705554687999,0,6.55536161343673,0,3.43731965269142,0.939475989150119,2.5899671098901,0.842704840213491,0,0.491337269247072,1.75653827998801,0,1.23633464639278,0,2.87447256726495,0,2.25213335769535,0,0.438977620880838,1.22595118319608,2.85452311922534,0.226864366320042,1.25572744982203,0,0,2.70081986475962,0,0.772921620136887,0,1.35021065793013,0.0974370051611986,0.504867548488229,0,0.161646056818812,2.13005755509969,0,0,0.193260853163297,0,0,0.731842236777572,0,0.348581828608555,0.829288440122964,46.6793574119913,7.66452454059243,12.5159625863853,5.14592750554308,9.66944449467364,0.464367928031979,2.88751792667834,18.4558608062156,14.3296986566386,0.964044119533928,15.9926260461971,13.2906460896368,1.66089433377768,20.3595275321848,16.0901601402784,1.53898862778556,1.4763109092493,1.40241773803446,0,0,1.26755034821831,1.96565443335525,1.18157981336281,0.882926198829301,0,2.05881372358231,0,0,7.94178882051884,0,0,3.11980435583874,2.88662684050547,0.579652024875384,0.587043471179108,0,20.8343480659475,70.9647987835051,19.7551099489819,12.0188062693282,0,0,0.594524649154913,1.87467667973554,0.503946384596579,0.567100388969546,0.0895585227028483,0,10.7347150166259,0,0.176096868026452,0.207328115540772,1.44119953416961,1.2624243342638,0.190493682876507,0,0,0,1.23392991243988,9.31063479316144,2.85826432630578,0,0,0.07333828582095,0,0,95.519211038828,0,1.04007436911366,0,0,1.8649552531127,0,0,4.93944202068461,0.325736184293735,0,1.58390374586686,0,0,2.39935178836937,37.703371998769,41.6873385888665,8.43335757932127,0,0,51.3492858146586,0,0.61642896765115,0,7.62178979155985,0,2.58753089831421,1.54011643535698,0,0,10.8260433788877,0,248.796113144734,2.24702107184155,0,0,0,3.00102312635806,1.08506009479894,32.4434543988059,21.0546206780651,18.4511825589704,35.8452729877702,0,4.5481500811197,14.4862299809507,0,4.79359838208428,0.0868836144680828,0,0.343143423810856,0,6.68714022537712,2.66818894508611,0,1.66435439510497,1.81434175997808,0,1.53461973288062,0.280660094433074,0,0,0.64341568457443,0,1.3878872442239,0.887808626565635,0.0821271560138091,0.519254429183621,2.44041794765914,0,0.40101294060657,1.19705285616665,0,1.0925470080403,2.09799063935079,0,0,0,0,0,2.27466768141793,1.36074964221213,4.96606607034921,4.62681758070868,0,5.01689773854853,0,1.66215201785745,0.895499018888713,0.219259876645935,4.18296721639841,0.256450125116389,0,0,0,0.732555718546747,0,0,2.600240984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|phase1_expression=0.181678379270557,0.214100523890983,0.140954404095971,0,0,0,30.3959853801973,0,1.04474251279935,0,5.58240934377942,0,1.31883489114227,0,3.31397375727916,10.7572023432284,12.6565850885035,13.1455816269727,25.3725055371064,0,2.24400760368678,2.82109249330279,0,3.01123735160345,1.88313959392204,10.8507036162091,8.29215953444452,12.1214603223066,7.08055698328027,2.30297638858328,8.82451902901633,4.59710612239464,6.024118375565,1.10926203050036,0,0,15.8544237240817,0,2.80762226458198,4.55722828503289,0,0,0,69.7911546141911,18.1380452970629,92.1819432513702,92.5067566884625,27.5482484974623,49.5530193432166,169.163126685424,78.897497610963,8.98632473576624,65.1569336592209,39.3745656986134,12.1883837934908,78.4970555892662,22.6512104548012,2.9214052977861,129.167402580521,1.92557416245656,77.999129347483,131.280817474313,31.7147215618395,49.4420710617925,103.604698190404,26.6671055604836,108.37107132523,70.6008749371449,53.7127405972807,6.08128765174327,46.6157617027694,1.84138817993782,12.0255707227536,6.12640330304631,5.10250319916104,15.5147397676198,10.1095768031846,5.70672192797724,0.48217676009124,33.0614782739848,19.891667719909,15.8917813775232,12.3197371122926,12.561188059029,4.44754626931777,33.2849573601876,12.0118796110804,4.59801951963587,5.94940385506376,12.4026988089597,2.27685187643779,3.52342313622563,24.8477598281399,9.25199300053181,3.92355994087075,27.391944816608,0,3.93010762749165,1.23360899399706,6.35308682484577,20.2071805312826,15.1503297835115,46.7584148178987,3.45372416344038,13.5518717438425,13.5135675696009,1.89562704635511,102.601147100266,109.770089340537,108.035703324615,60.2443038773149,0.289803085735052,7.1177550317789,6.95606153033254,42.8595647600405,3.73920830901968,16.0952607312807,12.026960591892,1.26509846009751,6.05274287215784,8.46408490013344,4.75226022224187,0.602300476311091,0.639933055772092,0,3.07810427657222,6.56902397536837,0,2.40696176205157,1.44824403882799,4.87613732627923,2.01210257911091,4.09160197899297,0,0,2.462390822334,0,2.43317435151318,0,1.55210578223795,2.98638271356629,0,0,1.48313777113772,0,0.348259474598534,2.39324328933957,0.715471872916026,4.57595928624102,4.45749001595478,0,16.3444573070164,0,1.13061588384802,12.1654836500873,1.6507082516404,5.43386912995707,0.516833518338658,0,0,0,0,8.29810995663776,0,4.0507097394088,0.0892997282840798,0.898117490504679,1.0135033243499,19.9311628705648,0,6.04565754970344,0,3.87780264148325,0,1.98788780678127,0,9.26864265692532,2.58152958673932,2.4826786753885,6.72813120170769,0,2.71334303258876,0,1.61652806483626,0.980771418680752,0,3.45705554687999,0,6.55536161343673,0,3.43731965269142,0.939475989150119,2.5899671098901,0.842704840213491,0,0.491337269247072,1.75653827998801,0,1.23633464639278,0,2.87447256726495,0,2.25213335769535,0,0.438977620880838,1.22595118319608,2.85452311922534,0.226864366320042,1.25572744982203,0,0,2.70081986475962,0,0.772921620136887,0,1.35021065793013,0.0974370051611986,0.504867548488229,0,0.161646056818812,2.13005755509969,0,0,0.193260853163297,0,0,0.731842236777572,0,0.348581828608555,0.829288440122964,46.6793574119913,7.66452454059243,12.5159625863853,5.14592750554308,9.66944449467364,0.464367928031979,2.88751792667834,18.4558608062156,14.3296986566386,0.964044119533928,15.9926260461971,13.2906460896368,1.66089433377768,20.3595275321848,16.0901601402784,1.53898862778556,1.4763109092493,1.40241773803446,0,0,1.26755034821831,1.96565443335525,1.18157981336281,0.882926198829301,0,2.05881372358231,0,0,7.94178882051884,0,0,3.11980435583874,2.88662684050547,0.579652024875384,0.587043471179108,0,20.8343480659475,70.9647987835051,19.7551099489819,12.0188062693282,0,0,0.594524649154913,1.87467667973554,0.503946384596579,0.567100388969546,0.0895585227028483,0,10.7347150166259,0,0.176096868026452,0.207328115540772,1.44119953416961,1.2624243342638,0.190493682876507,0,0,0,1.23392991243988,9.31063479316144,2.85826432630578,0,0,0.07333828582095,0,0,95.519211038828,0,1.04007436911366,0,0,1.8649552531127,0,0,4.93944202068461,0.325736184293735,0,1.58390374586686,0,0,2.39935178836937,37.703371998769,41.6873385888665,8.43335757932127,0,0,51.3492858146586,0,0.61642896765115,0,7.62178979155985,0,2.58753089831421,1.54011643535698,0,0,10.8260433788877,0,248.796113144734,2.24702107184155,0,0,0,3.00102312635806,1.08506009479894,32.4434543988059,21.0546206780651,18.4511825589704,35.8452729877702,0,4.5481500811197,14.4862299809507,0,4.79359838208428,0.0868836144680828,0,0.343143423810856,0,6.68714022537712,2.66818894508611,0,1.66435439510497,1.81434175997808,0,1.53461973288062,0.280660094433074,0,0,0.64341568457443,0,1.3878872442239,0.887808626565635,0.0821271560138091,0.519254429183621,2.44041794765914,0,0.40101294060657,1.19705285616665,0,1.0925470080403,2.09799063935079,0,0,0,0,0,2.27466768141793,1.36074964221213,4.96606607034921,4.62681758070868,0,5.01689773854853,0,1.66215201785745,0.895499018888713,0.219259876645935,4.18296721639841,0.256450125116389,0,0,0,0.732555718546747,0,0,2.600240984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| ||
|short_description=p1@RNU4-1 | |||
}} | }} |
Latest revision as of 19:51, 16 September 2015
Short description: | p1@RNU4-1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_RNU4-1_5end |
Coexpression cluster: | C2188_acute_Neurons_CD14_immature_CD4_pituitary_Mesenchymal |
Association with transcript: | 0bp_to_ENST00000363925_5end |
EntrezGene: | NA |
HGNC: | 10192 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 4.72e-18 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.72e-18 | 42 |
defensive cell | 6.81e-17 | 48 |
phagocyte | 6.81e-17 | 48 |
hematopoietic stem cell | 1.87e-12 | 168 |
hematopoietic oligopotent progenitor cell | 4.15e-12 | 161 |
hematopoietic multipotent progenitor cell | 4.15e-12 | 161 |
nongranular leukocyte | 4.88e-11 | 115 |
macrophage dendritic cell progenitor | 1.26e-10 | 61 |
hematopoietic lineage restricted progenitor cell | 2.12e-10 | 120 |
hematopoietic cell | 2.54e-10 | 177 |
monopoietic cell | 2.84e-10 | 59 |
monocyte | 2.84e-10 | 59 |
monoblast | 2.84e-10 | 59 |
promonocyte | 2.84e-10 | 59 |
myeloid cell | 2.91e-10 | 108 |
common myeloid progenitor | 2.91e-10 | 108 |
granulocyte monocyte progenitor cell | 3.94e-09 | 67 |
leukocyte | 4.21e-09 | 136 |
myeloid lineage restricted progenitor cell | 2.15e-08 | 66 |
myeloid leukocyte | 3.63e-08 | 72 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 9.54e-08 | 76 |