FFCP PHASE1:Hg19::chr13:23755127..23755166,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6445 | |EntrezGene=6445 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10809 | |HGNC=10809 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000545013_5end | |association_with_transcript=0bp_to_ENST00000545013_5end | ||
|cluster_id=chr13:23755127..23755166,+ | |||
|coexpression_cluster_id=C31 | |coexpression_cluster_id=C31 | ||
|description=CAGE_peak_1_at_SGCG_5end | |description=CAGE_peak_1_at_SGCG_5end | ||
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|ontology_enrichment_celltype=CL:0000136!3.26e-32!15;CL:0000325!8.21e-10!39;CL:0002334!7.81e-08!12;CL:0002615!1.03e-07!3;CL:0000188!1.10e-07!9;CL:0002579!2.83e-07!3;CL:0002521!3.75e-07!3 | |ontology_enrichment_celltype=CL:0000136!3.26e-32!15;CL:0000325!8.21e-10!39;CL:0002334!7.81e-08!12;CL:0002615!1.03e-07!3;CL:0000188!1.10e-07!9;CL:0002579!2.83e-07!3;CL:0002521!3.75e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000136;3.77e-42;13!CL:0002615;1.87e-12;3!CL:0002617;9.76e-09;2 | |ontology_enrichment_celltype_v019=CL:0000136;3.77e-42;13!CL:0002615;1.87e-12;3!CL:0002617;9.76e-09;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0000136,4.14e-49,15;CL:0002615,1.91e-12,3;CL:0002617,9.57e-09,2 | |||
|ontology_enrichment_development_v019=UBERON:0005062;1.59e-09;4!UBERON:0007284;1.59e-09;4 | |ontology_enrichment_development_v019=UBERON:0005062;1.59e-09;4!UBERON:0007284;1.59e-09;4 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:114;3.17e-09;2 | |ontology_enrichment_disease_v019=DOID:114;3.17e-09;2 | ||
|ontology_enrichment_disease_v019_2=DOID:114,3.23e-09,2 | |||
|ontology_enrichment_uberon=UBERON:0003688!2.53e-13!6;UBERON:0002358!2.53e-13!6;UBERON:0003684!2.53e-13!6;UBERON:0001178!2.53e-13!6;UBERON:0001443!1.67e-11!11;UBERON:0000310!1.39e-09!10;UBERON:0001013!3.76e-09!14;UBERON:0007023!1.66e-08!115;UBERON:0004151!5.82e-08!3;UBERON:0003978!9.38e-08!3;UBERON:0009751!9.38e-08!3;UBERON:0000946!9.38e-08!3;UBERON:0002523!9.38e-08!3;UBERON:0005983!9.38e-08!3;UBERON:0002165!9.38e-08!3;UBERON:0002062!9.38e-08!3;UBERON:0007280!9.38e-08!3;UBERON:0002190!3.75e-07!3 | |ontology_enrichment_uberon=UBERON:0003688!2.53e-13!6;UBERON:0002358!2.53e-13!6;UBERON:0003684!2.53e-13!6;UBERON:0001178!2.53e-13!6;UBERON:0001443!1.67e-11!11;UBERON:0000310!1.39e-09!10;UBERON:0001013!3.76e-09!14;UBERON:0007023!1.66e-08!115;UBERON:0004151!5.82e-08!3;UBERON:0003978!9.38e-08!3;UBERON:0009751!9.38e-08!3;UBERON:0000946!9.38e-08!3;UBERON:0002523!9.38e-08!3;UBERON:0005983!9.38e-08!3;UBERON:0002165!9.38e-08!3;UBERON:0002062!9.38e-08!3;UBERON:0007280!9.38e-08!3;UBERON:0002190!3.75e-07!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0003688;5.74e-16;6!UBERON:0002358;5.74e-16;6!UBERON:0003684;5.74e-16;6!UBERON:0001178;5.74e-16;6!UBERON:0004151;6.61e-13;3!UBERON:0001013;1.17e-12;14!UBERON:0003978;1.50e-12;3!UBERON:0000946;1.50e-12;3!UBERON:0007100;1.05e-11;25!UBERON:0004457;1.45e-10;9!UBERON:0000042;1.45e-10;9!UBERON:0000341;2.01e-09;2!UBERON:0005090;2.28e-09;2!UBERON:0001630;2.28e-09;2!UBERON:0002081;4.56e-09;2!UBERON:0005406;6.96e-09;2!UBERON:0002133;8.66e-09;2!UBERON:0003127;9.02e-09;2!UBERON:0001134;1.17e-08;16!UBERON:0002036;1.17e-08;16!UBERON:0001723;8.02e-07;3!UBERON:0001033;8.02e-07;3 | |ontology_enrichment_uberon_v019=UBERON:0003688;5.74e-16;6!UBERON:0002358;5.74e-16;6!UBERON:0003684;5.74e-16;6!UBERON:0001178;5.74e-16;6!UBERON:0004151;6.61e-13;3!UBERON:0001013;1.17e-12;14!UBERON:0003978;1.50e-12;3!UBERON:0000946;1.50e-12;3!UBERON:0007100;1.05e-11;25!UBERON:0004457;1.45e-10;9!UBERON:0000042;1.45e-10;9!UBERON:0000341;2.01e-09;2!UBERON:0005090;2.28e-09;2!UBERON:0001630;2.28e-09;2!UBERON:0002081;4.56e-09;2!UBERON:0005406;6.96e-09;2!UBERON:0002133;8.66e-09;2!UBERON:0003127;9.02e-09;2!UBERON:0001134;1.17e-08;16!UBERON:0002036;1.17e-08;16!UBERON:0001723;8.02e-07;3!UBERON:0001033;8.02e-07;3 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,5.65e-16,6;UBERON:0002358,5.65e-16,6;UBERON:0003684,5.65e-16,6;UBERON:0001178,5.65e-16,6;UBERON:0004151,7.03e-13,3;UBERON:0001013,1.21e-12,14;UBERON:0003978,1.63e-12,3;UBERON:0009751,1.63e-12,3;UBERON:0000946,1.63e-12,3;UBERON:0002523,1.63e-12,3;UBERON:0005983,1.63e-12,3;UBERON:0002165,1.63e-12,3;UBERON:0002062,1.63e-12,3;UBERON:0007280,1.63e-12,3;UBERON:0007100,1.05e-10,27;UBERON:0007023,2.39e-10,114;UBERON:0000341,2.06e-09,2;UBERON:0005090,2.33e-09,2;UBERON:0001630,2.33e-09,2;UBERON:0002081,5.05e-09,2;UBERON:0010227,5.05e-09,2;UBERON:0005406,6.43e-09,2;UBERON:0002133,9.20e-09,2;UBERON:0003127,9.95e-09,2;UBERON:0003103,1.41e-08,68;UBERON:0004457,7.41e-08,12;UBERON:0000042,7.41e-08,12;UBERON:0001723,8.13e-07,3;UBERON:0001033,8.13e-07,3;UBERON:0010056,8.13e-07,3 | |||
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| ||
|short_description=p1@SGCG | |short_description=p1@SGCG | ||
}} | }} |
Latest revision as of 20:46, 16 September 2015
Short description: | p1@SGCG |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SGCG_5end |
Coexpression cluster: | C31_skeletal_tongue_diaphragm_throat_penis_skin_trachea |
Association with transcript: | 0bp_to_ENST00000545013_5end |
EntrezGene: | SGCG |
HGNC: | 10809 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 4.14e-49 | 15 |
adipocyte of omentum tissue | 1.91e-12 | 3 |
adipocyte of breast | 9.57e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
omentum | 5.65e-16 | 6 |
peritoneum | 5.65e-16 | 6 |
abdominal cavity | 5.65e-16 | 6 |
visceral peritoneum | 5.65e-16 | 6 |
cardiac chamber | 7.03e-13 | 3 |
adipose tissue | 1.21e-12 | 14 |
valve | 1.63e-12 | 3 |
cardiac mesenchyme | 1.63e-12 | 3 |
cardial valve | 1.63e-12 | 3 |
tunica intima | 1.63e-12 | 3 |
heart layer | 1.63e-12 | 3 |
endocardium | 1.63e-12 | 3 |
endocardial cushion | 1.63e-12 | 3 |
presumptive endocardium | 1.63e-12 | 3 |
primary circulatory organ | 1.05e-10 | 27 |
adult organism | 2.39e-10 | 114 |
throat | 2.06e-09 | 2 |
muscle structure | 2.33e-09 | 2 |
muscle organ | 2.33e-09 | 2 |
cardiac atrium | 5.05e-09 | 2 |
future cardiac atrium | 5.05e-09 | 2 |
perirenal fat | 6.43e-09 | 2 |
atrioventricular valve | 9.20e-09 | 2 |
open tracheal system trachea | 9.95e-09 | 2 |
compound organ | 1.41e-08 | 68 |
cavity lining | 7.41e-08 | 12 |
serous membrane | 7.41e-08 | 12 |
tongue | 8.13e-07 | 3 |
gustatory system | 8.13e-07 | 3 |
future tongue | 8.13e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
heart disease | 3.23e-09 | 2 |