FFCP PHASE1:Hg19::chr2:128848881..128848908,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr2:128848881..128848908,+ to FFCP PHASE1:Hg19::chr2:128848881..128848908,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=56886 | |EntrezGene=56886 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15663 | |HGNC=15663 | ||
|TSSclassifier=strong | |||
|UniProt=Q9NYU2 | |UniProt=Q9NYU2 | ||
|association_with_transcript=0bp_to_ENST00000259253_5end | |||
|cluster_id=chr2:128848881..128848908,+ | |||
|description=CAGE_peak_2_at_UGGT1_5end | |||
|id=chr2:128848881..128848908,+ | |||
|ontology_enrichment_celltype=CL:0000012!5.43e-17!682;CL:0000548!2.33e-16!679;CL:0000004!2.33e-16!679;CL:0000255!2.33e-16!679;CL:0000144!1.50e-15!625;CL:0002371!2.86e-14!591;CL:0000055!5.51e-11!180;CL:0000063!8.79e-11!578;CL:0000057!1.16e-10!75;CL:0000048!1.63e-10!430;CL:0000723!1.96e-10!436;CL:0000034!6.71e-10!444;CL:0000003!2.09e-09!722;CL:0000220!1.43e-07!246;CL:0000222!2.79e-07!119;CL:0002321!3.53e-07!248;CL:0000134!7.84e-07!358 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,4.16e-11,76;CL:0000048,1.37e-10,427;CL:0000723,1.66e-10,433;CL:0000034,5.72e-10,441;CL:0000134,4.17e-07,354;CL:0002321,7.93e-07,250;CL:0000222,8.87e-07,121 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!5.64e-08!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;5.81e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,5.64e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0000926!1.11e-09!448;UBERON:0004120!1.11e-09!448;UBERON:0006603!1.11e-09!448;UBERON:0003914!7.73e-08!118;UBERON:0000490!2.72e-07!138;UBERON:0004872!3.28e-07!84 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003914,3.45e-08,117;UBERON:0000490,1.29e-07,148;UBERON:0000926,2.95e-07,315;UBERON:0004120,2.95e-07,315;UBERON:0006603,2.95e-07,315;UBERON:0002384,5.81e-07,371;UBERON:0004872,7.32e-07,83 | |||
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| ||
|short_description=p2@UGGT1 | |||
}} | }} |
Latest revision as of 21:57, 16 September 2015
Short description: | p2@UGGT1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_UGGT1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000259253_5end |
EntrezGene: | UGGT1 |
HGNC: | 15663 |
UniProt: | Q9NYU2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 4.16e-11 | 76 |
multi fate stem cell | 1.37e-10 | 427 |
somatic stem cell | 1.66e-10 | 433 |
stem cell | 5.72e-10 | 441 |
mesenchymal cell | 4.17e-07 | 354 |
embryonic cell | 7.93e-07 | 250 |
mesodermal cell | 8.87e-07 | 121 |
Ontology term | p-value | n |
---|---|---|
epithelial tube | 3.45e-08 | 117 |
unilaminar epithelium | 1.29e-07 | 148 |
mesoderm | 2.95e-07 | 315 |
mesoderm-derived structure | 2.95e-07 | 315 |
presumptive mesoderm | 2.95e-07 | 315 |
connective tissue | 5.81e-07 | 371 |
splanchnic layer of lateral plate mesoderm | 7.32e-07 | 83 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 5.64e-08 | 14 |