FFCP PHASE1:Hg19::chr20:50179584..50179611,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4773 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7776 | |||
|TSSclassifier=strong | |||
|UniProt=F8W8G4 | |||
|association_with_transcript=-245bp_to_ENST00000371567_5end | |||
|cluster_id=chr20:50179584..50179611,- | |||
|coexpression_cluster_id=C177 | |||
|description=CAGE_peak_6_at_NFATC2_5end | |||
|id=chr20:50179584..50179611,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002567;5.46e-60;3!CL:0000148;3.13e-32;10!CL:0000710;6.00e-25;20!CL:0000147;3.53e-23;14!CL:0000075;1.51e-18;27!CL:0002077;5.62e-13;34 | |||
|ontology_enrichment_celltype_v019_2=CL:0002567,5.46e-60,3;CL:0000148,3.13e-32,10;CL:0000541,3.13e-32,10;CL:0000710,5.70e-25,20;CL:0000147,3.53e-23,14;CL:0000075,1.46e-18,27;CL:0002077,8.79e-15,34;CL:0000133,2.74e-08,59;CL:0000333,8.44e-08,41;CL:0000221,7.72e-07,72 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1909;1.82e-11;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,1.82e-11,2 | |||
|ontology_enrichment_uberon=UBERON:0001049!3.45e-24!57;UBERON:0005068!3.45e-24!57;UBERON:0006241!3.45e-24!57;UBERON:0007135!3.45e-24!57;UBERON:0001017!3.47e-22!82;UBERON:0005743!6.46e-22!86;UBERON:0007023!5.96e-21!115;UBERON:0002616!6.23e-20!59;UBERON:0000955!8.18e-19!69;UBERON:0006238!8.18e-19!69;UBERON:0000073!1.46e-18!94;UBERON:0001016!1.46e-18!94;UBERON:0003075!1.78e-18!86;UBERON:0007284!1.78e-18!86;UBERON:0002346!4.32e-17!90;UBERON:0003076!1.27e-14!15;UBERON:0003057!1.27e-14!15;UBERON:0002020!2.80e-14!34;UBERON:0003528!2.80e-14!34;UBERON:0001893!4.59e-14!34;UBERON:0004733!1.49e-13!12;UBERON:0002028!1.49e-13!12;UBERON:0007277!1.49e-13!12;UBERON:0002791!2.71e-13!33;UBERON:0002780!3.60e-13!41;UBERON:0001890!3.60e-13!41;UBERON:0006240!3.60e-13!41;UBERON:0003080!1.06e-12!42;UBERON:0001869!2.20e-12!32;UBERON:0004732!2.83e-12!13;UBERON:0003056!2.45e-10!61;UBERON:0002420!6.84e-10!9;UBERON:0007245!6.84e-10!9;UBERON:0010009!6.84e-10!9;UBERON:0010011!6.84e-10!9;UBERON:0000454!6.84e-10!9;UBERON:0000033!6.85e-10!123;UBERON:0002308!7.10e-10!9;UBERON:0000125!7.10e-10!9;UBERON:0002680!9.80e-10!9;UBERON:0001895!9.80e-10!9;UBERON:0010092!9.80e-10!9;UBERON:0000153!1.22e-09!129;UBERON:0007811!1.22e-09!129;UBERON:0001950!1.03e-08!20;UBERON:0002298!2.52e-08!8;UBERON:0004121!3.30e-08!169;UBERON:0000924!9.74e-08!173;UBERON:0006601!9.74e-08!173;UBERON:0002619!1.15e-07!22;UBERON:0009663!1.43e-07!7;UBERON:0000956!1.89e-07!25;UBERON:0000203!1.89e-07!25;UBERON:0000369!9.07e-07!4;UBERON:0002435!9.07e-07!4;UBERON:0000204!9.07e-07!4;UBERON:0010082!9.07e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0001896;7.76e-08;3!UBERON:0005290;7.76e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001896,8.29e-08,3;UBERON:0005290,8.29e-08,3;UBERON:0010096,8.29e-08,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0.975865597581014,0.492484232307152,0.408001382488506,0.313454721478088,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223915474239924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.665188192387692,0.087834785693126,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0.347140501607594,0,0,0,0,0.516833518338658,0,0.33472061276467,0,0,0,0,0,0.0892997282840798,0,0.112611480483322,0,0,0.549605231791222,0,0,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0,0,0,0.368199594569197,0,0,0,0.169560592310488,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234817388471643,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0,2.29193055334967,5.86087236050235,3.4214489204541,0.925447434329912,0,6.85983438313388,0.112131084345361,0.43596006883328,0.07333828582095,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0.239624855491583,0,0,0,0,0,0,0,0,0,0.508189248444927,0,0,0,0.637938751653163,0,0,0,0,0,0,0.207970861530807,0,0,0,0.300946099727719,0,2.0694614258501,0,0.368738337083406,0,0,0.343143423810856,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0.519254429183621,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183138929636687,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.6970372701606,0,0,0,0,0,0,0,0,0,0,0.318203247925937,0,0,0,0,0,0,0.421258456238981,0,0,0,0,0,0,0,0,0,0,0.655894752046633,0,0.30982349809975,0.281695602532241,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0.962479855263359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296964680832639,0,0.994147647766298,0.140669416410513,2.56010021552684,0,0,0.19924798825107,0,0,0.511343412510774,0,0,0,0,0,0.0986434056369336,0,0,0,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0.120596438625408,0,0.552896299656123,0.295547618953547,0.219385397153973,0,0,0.384751292518985,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.442287822516696,0,0,0,0,0.269604531922708,0,0.234264445725339,0,0,0,0.394584402849391,0,0,0.126373159256976,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0,0,0,0.193978032976839,0,0,0.137041924646751,0.19871461170299,0,0,0,0.213452994739353,0,0,0.114536596165916,0,0,0,0,0,0.313808538937,0,0,0.600420288709789,0,0,0,0,0,0,0,0,0,0.223171457441873,0,0,0,0,0,0,0,0,0,0,0.160753148465019,0,0,0,0,0.121499113316049,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0.387848869084652,0.26446520348538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,1.14681839138014,0.443716206147409,0.248385611765534,0,0,12.8901749910401,0,0,0,0,0,0,0,0,0,0,0,0,0.310874401165561,0,0,0,0,0.414706207840855,0,0,0,0,0,0.909243296012797,0.107410557042488,0,0,0,0,0.336749488765919,0,0,0,0,0.226705925512272,0,0,0,0,0,0.176689145945881,0,0,0,0,0.303859956177382,0.414775308455192,0,0,0.490696182767533,0,0,0,0,0,0,0,0,0,1.86623178009892,0,0,0,0,0,0,0,0,0,0,0,0.352675943690684,0,0.706521476061055,1.41696576325585,0.478901577171454,0.205116364240755,0,0.207471757392654,0.161475645631851,0,0,0,0,0,0.381382095467167,0,0,0.376051641746286,0.20170506870352,0,0,0.163771917510097,0,0.135075169236789,0,0.826747186004736,0.126831620387814,0.546974809018219,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0.203909198930495,0.197318320688547,0,0.111231401892069,0.078493092850514,0.785577949580009,0,0,0.647782773655864,0,0.714765441766563,0,0.697448552208751,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0.245148321753905,0,0.196308467114945,0,0.8453114551668,0,0,0,0,0,0,0,0.730336388246517,0,0.143339583151451,0.631086248772738,0,0,0,0,0,0,0,0,0.126698501011437,0,0,0,0,0,0.267964130156178,0,0.310298987585686,0.639701945702943,0,0,0,0.112131862580613,0.0636471582781649,0.202117188958219,0,0,0,0.0717222053926763,0,0,0,0,0,0,0.122241444182866,0.406896178315738,0,0,0 | |||
|short_description=p6@NFATC2 | |||
}} |
Latest revision as of 23:29, 16 September 2015
Short description: | p6@NFATC2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_NFATC2_5end |
Coexpression cluster: | C177_melanoma_Melanocyte_mesenchymal_retina_Mallassezderived_Gingival_squamous |
Association with transcript: | -245bp_to_ENST00000371567_5end |
EntrezGene: | NFATC2 |
HGNC: | 7776 |
UniProt: | F8W8G4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
light melanocyte | 5.46e-60 | 3 |
melanocyte | 3.13e-32 | 10 |
melanoblast | 3.13e-32 | 10 |
neurecto-epithelial cell | 5.70e-25 | 20 |
pigment cell | 3.53e-23 | 14 |
columnar/cuboidal epithelial cell | 1.46e-18 | 27 |
ecto-epithelial cell | 8.79e-15 | 34 |
neurectodermal cell | 2.74e-08 | 59 |
migratory neural crest cell | 8.44e-08 | 41 |
ectodermal cell | 7.72e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
medulla oblongata | 8.29e-08 | 3 |
myelencephalon | 8.29e-08 | 3 |
future myelencephalon | 8.29e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
melanoma | 1.82e-11 | 2 |