FFCP PHASE1:Hg19::chr9:22113541..22113546,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=100048912 | |EntrezGene=100048912 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=34341 | |HGNC=34341 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-118bp_to_uc010miz.2_5end | |association_with_transcript=-118bp_to_uc010miz.2_5end | ||
|cluster_id=chr9:22113541..22113546,+ | |||
|coexpression_cluster_id=C318 | |||
|description=CAGE_peak_3_at_CDKN2B-AS_5end | |description=CAGE_peak_3_at_CDKN2B-AS_5end | ||
|id=chr9:22113541..22113546,+ | |id=chr9:22113541..22113546,+ | ||
|ontology_enrichment_celltype=CL:0000181!9.26e-09!12;CL:0000417!9.26e-09!12;CL:0000668!9.26e-09!12;CL:0000414!9.26e-09!12;CL:0000412!9.26e-09!12;CL:0000182!9.26e-09!12;CL:0002594!1.76e-07!4 | |ontology_enrichment_celltype=CL:0000181!9.26e-09!12;CL:0000417!9.26e-09!12;CL:0000668!9.26e-09!12;CL:0000414!9.26e-09!12;CL:0000412!9.26e-09!12;CL:0000182!9.26e-09!12;CL:0002594!1.76e-07!4 | ||
|ontology_enrichment_celltype_v019=CL:0000306;8.61e-07;4!CL:0002222;8.61e-07;4!CL:0002224;8.61e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000306,8.61e-07,4;CL:0002222,8.61e-07,4;CL:0002224,8.61e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0001045;5.13e-23;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000059!8.11e-29!11;UBERON:0000160!5.28e-22!27;UBERON:0001155!2.11e-18!9;UBERON:0005409!1.00e-16!35;UBERON:0004907!1.34e-12!5;UBERON:0004921!1.23e-09!129;UBERON:0004185!1.23e-09!129;UBERON:0009856!1.86e-08!26;UBERON:0001154!4.35e-08!1;UBERON:0001153!4.35e-08!1;UBERON:0001052!1.44e-07!4;UBERON:0001007!1.66e-07!155;UBERON:0001555!1.66e-07!155;UBERON:0007026!1.66e-07!155;UBERON:0001310!1.76e-07!4;UBERON:0009854!7.21e-07!23 | |||
|ontology_enrichment_uberon_v019=UBERON:0000059;9.33e-50;11!UBERON:0000160;8.61e-44;17!UBERON:0001155;2.42e-39;9!UBERON:0005409;2.49e-34;22!UBERON:0004921;3.12e-23;33!UBERON:0001154;5.13e-23;1!UBERON:0001153;5.13e-23;1!UBERON:0009854;5.13e-23;1!UBERON:0004907;2.30e-18;5!UBERON:0001555;2.63e-09;54!UBERON:0001007;4.78e-09;81!UBERON:0010077;8.61e-07;4!UBERON:0005389;8.61e-07;4!UBERON:0000484;8.61e-07;4!UBERON:0000965;8.61e-07;4!UBERON:0001803;8.61e-07;4!UBERON:0001052;9.63e-07;4!UBERON:0009856;9.63e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000059,8.44e-50,11;UBERON:0000160,8.00e-44,17;UBERON:0001155,2.42e-39,9;UBERON:0005409,2.03e-30,25;UBERON:0001154,5.13e-23,1;UBERON:0001153,5.13e-23,1;UBERON:0001045,5.13e-23,1;UBERON:0004907,2.11e-18,5;UBERON:0004921,5.69e-09,118;UBERON:0001007,2.87e-07,145;UBERON:0001555,2.87e-07,145;UBERON:0007026,2.87e-07,145;UBERON:0010077,8.61e-07,4;UBERON:0005389,8.61e-07,4;UBERON:0000484,8.61e-07,4;UBERON:0002546,8.61e-07,4;UBERON:0000965,8.61e-07,4;UBERON:0001803,8.61e-07,4;UBERON:0003073,8.61e-07,4;UBERON:0005426,8.61e-07,4;UBERON:0001052,9.11e-07,4 | |||
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|short_description=p3@CDKN2B-AS | |short_description=p3@CDKN2B-AS | ||
}} | }} |
Latest revision as of 23:34, 16 September 2015
Short description: | p3@CDKN2B-AS |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CDKN2B-AS_5end |
Coexpression cluster: | C318_hepatoma_Intestinal_bile_small_colon_Prostate_endometrial |
Association with transcript: | -118bp_to_uc010miz.2_5end |
EntrezGene: | CDKN2B-AS |
HGNC: | 34341 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
crystallin accumulating cell | 8.61e-07 | 4 |
vertebrate lens cell | 8.61e-07 | 4 |
lens epithelial cell | 8.61e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
large intestine | 8.44e-50 | 11 |
intestine | 8.00e-44 | 17 |
colon | 2.42e-39 | 9 |
gastrointestinal system | 2.03e-30 | 25 |
vermiform appendix | 5.13e-23 | 1 |
caecum | 5.13e-23 | 1 |
midgut | 5.13e-23 | 1 |
lower digestive tract | 2.11e-18 | 5 |
subdivision of digestive tract | 5.69e-09 | 118 |
digestive system | 2.87e-07 | 145 |
digestive tract | 2.87e-07 | 145 |
primitive gut | 2.87e-07 | 145 |
cuboidal epithelium | 8.61e-07 | 4 |
transparent eye structure | 8.61e-07 | 4 |
simple cuboidal epithelium | 8.61e-07 | 4 |
cranial placode | 8.61e-07 | 4 |
lens of camera-type eye | 8.61e-07 | 4 |
epithelium of lens | 8.61e-07 | 4 |
lens placode | 8.61e-07 | 4 |
lens vesicle | 8.61e-07 | 4 |
rectum | 9.11e-07 | 4 |