FFCP PHASE1:Hg19::chr1:24829005..24829020,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=11123 | |EntrezGene=11123 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3042 | |HGNC=3042 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UKA8,E5L4P0 | |UniProt=Q9UKA8,E5L4P0 | ||
|association_with_transcript=-366bp_to_ENST00000374395,ENST00000436717,NM_001251977,NM_001251981,NM_001251983,NM_013441,uc001bjj.2_5end | |association_with_transcript=-366bp_to_ENST00000374395,ENST00000436717,NM_001251977,NM_001251981,NM_001251983,NM_013441,uc001bjj.2_5end | ||
|cluster_id=chr1:24829005..24829020,+ | |||
|coexpression_cluster_id=C23 | |||
|description=CAGE_peak_5_at_RCAN3_5end | |description=CAGE_peak_5_at_RCAN3_5end | ||
|id=chr1:24829005..24829020,+ | |id=chr1:24829005..24829020,+ | ||
|ontology_enrichment_celltype=CL:0000791!8.14e-11!18;CL:0000789!8.14e-11!18;CL:0002420!8.14e-11!18;CL:0002419!8.14e-11!18;CL:0000790!8.14e-11!18;CL:0000625!3.30e-07!11;CL:0000084!8.56e-07!25;CL:0000827!8.56e-07!25 | |ontology_enrichment_celltype=CL:0000791!8.14e-11!18;CL:0000789!8.14e-11!18;CL:0002420!8.14e-11!18;CL:0002419!8.14e-11!18;CL:0000790!8.14e-11!18;CL:0000625!3.30e-07!11;CL:0000084!8.56e-07!25;CL:0000827!8.56e-07!25 | ||
|ontology_enrichment_celltype_v019=CL:0000791;1.99e-25;18!CL:0000789;1.99e-25;18!CL:0002419;1.99e-25;18!CL:0000084;4.70e-17;25!CL:0000625;8.63e-15;11!CL:0000624;1.45e-14;6!CL:0000542;3.60e-08;53!CL:0000898;4.23e-08;3!CL:0000623;9.85e-08;3!CL:0000226;5.02e-07;3!CL:0000842;5.02e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,1.97e-25,18;CL:0000789,1.97e-25,18;CL:0002420,1.97e-25,18;CL:0002419,1.97e-25,18;CL:0000790,1.97e-25,18;CL:0000084,4.67e-17,25;CL:0000827,4.67e-17,25;CL:0000838,5.33e-15,52;CL:0000738,8.17e-15,136;CL:0000625,8.42e-15,11;CL:0000542,1.35e-14,53;CL:0000051,1.35e-14,53;CL:0000624,1.47e-14,6;CL:0000037,1.85e-11,168;CL:0000988,2.55e-10,177;CL:0002031,1.31e-09,120;CL:0002087,2.13e-09,115;CL:0002032,1.05e-08,161;CL:0000837,1.05e-08,161;CL:0000898,4.30e-08,3;CL:0000623,9.99e-08,3;CL:0000825,9.99e-08,3;CL:0000226,4.83e-07,3;CL:0000842,4.83e-07,3;CL:0000767,9.49e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000790;1.99e-25;18!CL:0000051;3.60e-08;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0.697801167972428,0,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.72037132218685,1.91914699048606,2.01260960310899,0,0,0.369754010166788,0.232401601740905,0.142169232487422,2.05520307534393,2.76997704265939,2.80762226458198,5.859293509328,0,0,0.257575567634187,0,0,0.242584061187816,0,0,0.619412741790207,0,0,0,0.689491361473237,0.645484683583826,0,0.376484679085209,0.545812300115692,0,0,0.641858054152187,0.639337125799041,0,0,0,0.290209238628584,0.56738522469114,0,0.251248665256743,2.60741459210101,0,0,0,1.26584954976354,0.422510572623884,0,0.419317291016752,0,1.20141514273205,0.964353520182481,0.570025487482497,0,0.365328307529268,0,0,0.889509253863555,2.13365111283254,0,0.574752439954483,0,0,3.98449078376614,4.69789751496751,4.58727873750275,6.60856642895129,10.0891541336676,0.790152254325231,16.523620689562,32.6198933081807,22.4105633909465,1.5046784585161,21.510869597817,12.3096429491031,31.1722765452658,0.779873198196215,19.4439898933393,12.84896588585,9.20733136801053,0.384273959177026,0.780356085359269,0.657751618414705,0.276350017785848,1.44901542867526,13.9389369372337,12.3068780921268,19.8617495229456,0.679856056185397,19.9274656672999,15.806862492201,10.1207876807801,4.14135038621326,3.25541726928209,0,4.9689789295665,2.68771883424279,6.24653632761729,1.4206635122641,0.821127996921047,14.1124720257313,21.6626558584641,18.9719969086467,2.43806866313962,0,0,0,0,0,0,0.973269740605272,0,0,0.087834785693126,0.327447688744282,0,0.370784442784429,0,0,0,0.476981248610684,0.571994910780128,1.11437250398869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0.436094052142534,0,0.12663051166458,0,0,0,0,0,0,0,0,0,0,0,0,0.312160076830321,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0.718618141816238,0,0,0,0,0,0,0,0.358779271377724,0,0,1.50045548042201,0,1.28820270022815,0.18611685633159,0.506328996723799,0.292311015483596,0.504867548488229,0,0,0.710019185033229,0,0,0.193260853163297,0.545492241181669,0.860413786167011,0,0,0.116193942869518,0.10366105501537,0,0,0,0,0,0.464367928031979,0,0,0,0,0,0.217879444092406,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0.441463099414651,1.59884970106048,0,0.219500570817251,0,0,0.185176890317059,0,0,0,0,0,0,0,0,0,0,0,0,0,0.93733833986777,0.335964256397719,0.425325291727159,0.179117045405697,0.290633938513962,0,0,0,6.42717158176393,5.47655822984453,6.69084897159814,0,0,0,0,0,0.300343057843917,0,0,0,0,0.258543431515556,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179060963239896,0,8.86638420908672,13.8001647910091,11.1658441563381,0.254094624222463,0,0,0,0,1.49801404789436,0,0.828831026872071,0,0,0,0.207970861530807,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,2.48121631347465,3.8828556147351,5.33637789017222,0.606255142892519,0,0,0,0.153461973288062,0.280660094433074,0.128139149255701,0,0.160853921143607,0,0,0,0,0.519254429183621,0.116210378459959,1.81289174387433,0.200506470303285,0.0920809889358963,0,0,0,0,0.15403067420883,0,0,0,0,0.170093705276516,0,0,0,0,0.254876273045038,0,0,0,0,0,0,0,0.515205058238611,0,0.165018999841176,0.574265537996172,0,0,0,0,0,0,0,0,0.0852266274161009,0,0.495854746082934,0.576570202095319,0.893288987462089,0.50578890427775,0.464845549297286,0,0,0,0,0,0,0,0,0,0,0,0,0.318203247925937,0,0,0,0,0.202182481573316,0,0,0,0,0,0.136499911407986,0.141405431953713,0,0,0,0,0,0,0.202910376962704,0.30982349809975,0,0.143411352204052,0.196498082026242,0,0,0.211107635297664,0,0,0,0.192444225451024,1.34060455107157,0,0.282431402330337,0,0,0.443430153536676,0.229723400206959,0.507447609232169,0.764637207142375,0.569647187174163,0.476463550915578,1.23408681925858,0.648473311192717,1.08006287447623,0.79312517629427,0.106824071127473,0,0.245040215981032,0,0,0,0.159426272728822,0,0.191505370132367,0.211673582723883,0,0,0,0,0,0.169291777801603,0,0,0,0.687010689511529,0,0,0.166849141711909,0,0,0,0,0,0,0,0,0,0,0,4.29740072527842,0,1.22864280839693,0,0,0.333926115068718,0.16480387422676,0.63337622438398,0.597743964753209,0.552567831062295,11.3369736534424,0.20453736500431,0,0,0.359473404589307,0,0,0.0986434056369336,0,0,0,0.185536196323703,0,0.520855522170466,2.18649999990489,0.724999575434793,0,1.27126825146383,0.236387681767936,0.689486746482929,0.291604613383254,0,0,0.361789315876224,3.05163472634166,3.53853631779919,0.886642856860642,0.219385397153973,0,0.278847488557207,0.153900517007594,0,0.23056390438806,0.179515288819544,0.108647371922008,3.19001159731919,0.274792780205587,1.5991043280559,0,0,0,0,0,0,0,0,0.632994193584081,0.326465616318295,0.706765357169704,0,0,0.265372693510018,0,0,0,0,0.134802265961354,0,0.234264445725339,0,0,0,0.394584402849391,1.20990716048664,0,0.063186579628488,1.20258735531594,0.103688191397247,0.664653872707185,0,0,0,0.284609546029793,0,0,0.391969589657511,0.34823682632161,1.57254001417827,0.171986032471617,0.0967563312890851,0,0.246346371159628,0.193978032976839,0.0882561266915003,0,0.411125773940253,0.596143835108969,0,0.391102765469606,0.0801588202515337,0.42690598947870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| ||
|short_description=p5@RCAN3 | |short_description=p5@RCAN3 | ||
}} | }} |
Latest revision as of 00:41, 17 September 2015
Short description: | p5@RCAN3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_RCAN3_5end |
Coexpression cluster: | C23_CD4_CD8_Natural_Peripheral_Basophils_CD19_CD14 |
Association with transcript: | -366bp_to_ENST00000374395, ENST00000436717, NM_001251977, NM_001251981, NM_001251983, NM_013441, uc001bjj.2_5end |
EntrezGene: | RCAN3 |
HGNC: | 3042 |
UniProt: | Q9UKA8E5L4P0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 1.97e-25 | 18 |
alpha-beta T cell | 1.97e-25 | 18 |
immature T cell | 1.97e-25 | 18 |
mature T cell | 1.97e-25 | 18 |
immature alpha-beta T cell | 1.97e-25 | 18 |
T cell | 4.67e-17 | 25 |
pro-T cell | 4.67e-17 | 25 |
lymphoid lineage restricted progenitor cell | 5.33e-15 | 52 |
leukocyte | 8.17e-15 | 136 |
CD8-positive, alpha-beta T cell | 8.42e-15 | 11 |
lymphocyte | 1.35e-14 | 53 |
common lymphoid progenitor | 1.35e-14 | 53 |
CD4-positive, alpha-beta T cell | 1.47e-14 | 6 |
hematopoietic stem cell | 1.85e-11 | 168 |
hematopoietic cell | 2.55e-10 | 177 |
hematopoietic lineage restricted progenitor cell | 1.31e-09 | 120 |
nongranular leukocyte | 2.13e-09 | 115 |
hematopoietic oligopotent progenitor cell | 1.05e-08 | 161 |
hematopoietic multipotent progenitor cell | 1.05e-08 | 161 |
naive T cell | 4.30e-08 | 3 |
natural killer cell | 9.99e-08 | 3 |
pro-NK cell | 9.99e-08 | 3 |
single nucleate cell | 4.83e-07 | 3 |
mononuclear cell | 4.83e-07 | 3 |
basophil | 9.49e-07 | 3 |