FFCP PHASE1:Hg19::chr13:30424016..30424023,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5412 | |EntrezGene=5412 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=12504 | |HGNC=12504 | ||
|TSSclassifier=strong | |||
|UniProt=O95164 | |UniProt=O95164 | ||
|association_with_transcript=136bp_to_BC059385_5end | |association_with_transcript=136bp_to_BC059385_5end | ||
|cluster_id=chr13:30424016..30424023,- | |||
|description=CAGE_peak_14_at_UBL3_5end | |description=CAGE_peak_14_at_UBL3_5end | ||
|id=chr13:30424016..30424023,- | |id=chr13:30424016..30424023,- | ||
|ontology_enrichment_celltype=CL:0002541;3.37e-25;3!CL:0000349;1.39e-15;19!CL:0002537;2.33e-15;5!CL:0002262;2.48e-10;2!CL:1000398;2.48e-10;2 | |ontology_enrichment_celltype= | ||
| | |ontology_enrichment_celltype_v019=CL:0002541;3.37e-25;3!CL:0000349;1.39e-15;19!CL:0002537;2.33e-15;5!CL:0002262;2.48e-10;2!CL:1000398;2.48e-10;2 | ||
|ontology_enrichment_disease=DOID:3151;2.71e-19;1!DOID:3149;2.71e-19;1!DOID:3451;2.48e-10;2!DOID:4159;2.48e-10;2!DOID:0060122;2.48e-10;2 | |ontology_enrichment_celltype_v019_2=CL:0002541,3.38e-25,3;CL:0000349,1.29e-15,19;CL:0002537,2.02e-15,5;CL:0002262,2.27e-10,2;CL:1000398,2.27e-10,2 | ||
|ontology_enrichment_uberon=UBERON:0005631;3.40e-29;10!UBERON:0000158;3.40e-29;10!UBERON:0003124;3.37e-25;3!UBERON:0000920;3.37e-25;3!UBERON:0000029;2.71e-19;1!UBERON:0000478;2.04e-12;24!UBERON:0000305;2.98e-11;7!UBERON:0001897;2.48e-10;2!UBERON:0001281;2.48e-10;2!UBERON:0003497;2.48e-10;2!UBERON:0003909;2.48e-10;2!UBERON:0003835;2.48e-10;2!UBERON:0010225;2.48e-10;2!UBERON:0001280;2.63e-07;3!UBERON:0004647;2.63e-07;3 | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3151;2.71e-19;1!DOID:3149;2.71e-19;1!DOID:3451;2.48e-10;2!DOID:4159;2.48e-10;2!DOID:0060122;2.48e-10;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3151,5.62e-19,1;DOID:3149,5.62e-19,1;DOID:3451,3.58e-10,2;DOID:4159,3.58e-10,2;DOID:0060122,3.58e-10,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!2.00e-13!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0005631;3.40e-29;10!UBERON:0000158;3.40e-29;10!UBERON:0003124;3.37e-25;3!UBERON:0000920;3.37e-25;3!UBERON:0000029;2.71e-19;1!UBERON:0000478;2.04e-12;24!UBERON:0000305;2.98e-11;7!UBERON:0001897;2.48e-10;2!UBERON:0001281;2.48e-10;2!UBERON:0003497;2.48e-10;2!UBERON:0003909;2.48e-10;2!UBERON:0003835;2.48e-10;2!UBERON:0010225;2.48e-10;2!UBERON:0001280;2.63e-07;3!UBERON:0004647;2.63e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,3.38e-25,3;UBERON:0005631,4.85e-21,14;UBERON:0000158,4.85e-21,14;UBERON:0000029,1.88e-19,1;UBERON:0000478,1.93e-12,24;UBERON:0003124,2.18e-11,7;UBERON:0000305,2.69e-11,7;UBERON:0001897,1.89e-10,2;UBERON:0010225,1.89e-10,2;UBERON:0001281,2.27e-10,2;UBERON:0003497,2.27e-10,2;UBERON:0003909,2.27e-10,2;UBERON:0003835,2.27e-10,2;UBERON:0004871,5.29e-10,8;UBERON:0001280,2.47e-07,3;UBERON:0004647,2.47e-07,3;UBERON:0005171,2.47e-07,3 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0.273748850145768,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10799081706375,0.200544447470142,0,0.447830948479849,0,0.257575567634187,0,0,0.485168122375632,0,0,0,0,0.256160706529101,0.236482229888585,0.344745680736619,0,0,0,0,0,0.306083892370903,0,0,0.659702600373432,0.398927315243264,0,0.290209238628584,0.56738522469114,0,0.251248665256743,0,0,0.605399502633369,0,0.632924774881769,0,0,0,0.112328631146495,0.150176892841506,0.16072558669708,0,0,0,0,0.546138611262131,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222820913770347,0.294605907474837,0,0,0,0.130059347559878,0,0,0,0,0,0,0,0,0.34362744548263,0,0.637130828648193,0,0,0.150575119077773,0.127986611154418,0,0.236777252044017,0,0,0,0,0,0,0,0.361439152384566,0,0.144846518960824,0,0.486634870302636,0,0,0,0.196468613246569,0,0,0.324547393654683,0.870648686496336,0.26591592103773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0.25326102332916,0.264818361626438,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0.298897361103602,0,0,0,0.204154171254893,0.245668634623536,0,0,0,0,0,0.168336113954066,0,0,0,0,0.150238058906597,0,0.179389635688862,0.213557388818567,0,0.600182192168805,0.618315175430633,0.257640540045629,0.18611685633159,0.168776332241266,0.292311015483596,0.252433774244115,0.276149695926898,0.323292113637624,0.355009592516614,0.503760491138201,0.169560592310488,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0,0,0,0,0,0,0.122988438543114,0,0.109750285408626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.594524649154913,0,0.16798212819886,0,0.0895585227028483,0,0,0,0,0.207328115540772,0,0.37872730027914,0.063497894292169,0.381988425558278,0,0,0,0.300343057843917,0.285826432630578,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,1.2162378064119,0,0,0,0,0,0,0,0,0,0.197030760201927,0.215627574859517,0.128343036279748,0.254094624222463,0,0,0,0,0,0,0,0.12269149171914,0,0,0.207970861530807,0,0.157702415033935,0.117141414992713,0,0,0,0,0,0.173767228936166,0,0,0,0.215714200818617,0.106727557803444,0,0,0,0.248107807818777,0,0,0.128139149255701,0,0,0,0,0.532685175939381,0.410635780069046,0,0.232420756919918,0,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0.247528499761764,0.574265537996172,0,0,0.193341436584244,0,0,0,0.322260734604821,0.145016693914229,0,0,0,0.192190067365106,0,0.30347334256665,0.464845549297286,0.31481234683064,0.6970372701606,0,0,0,0.18532421910392,0,0,0,0,0,0,0.318203247925937,0,0,0,0,0.202182481573316,0,0,0,0.487426979262569,0,0,0.141405431953713,0,0,0,0,0,0,0.202910376962704,0.30982349809975,0,0,0.0982490410131212,0,0,0.211107635297664,0.329294892959902,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0.238231775457789,0,0.648473311192717,0,0,0,0,0.245040215981032,0,0,0,0,0,0.191505370132367,0,0,0,0.228234679033192,0,0,0,0,0,0,0,0.614481528616916,0,0,0,0,0,0,0,0,0,0.879049075631364,0.242721043499027,0,0,1.19372242368845,1.78178808499583,0.921482106297696,0,0,0.111308705022906,0.16480387422676,0,0.398495976502139,0,0,0,0,0,0,0,0,0.394573622547734,0,0,0,0.74214478529481,0,0,0.174919999992391,0.724999575434793,0,0,0.472775363535873,0,0,0,0,0.241192877250816,0,0.110579259931225,0,0,0.10893846351899,0.278847488557207,0.615602068030377,0.113942055847001,0,0,0.108647371922008,1.27600463892768,0.457987967009312,3.19820865611181,0,0,0,0,0,0,0,0,0,0,0,0,0,0.530745387020035,0.611030144933625,0,0,0,0.202203398942031,0.802577647298789,0.702793337176017,0,0,0,0,0,0,0.252746318513952,0.150323419414493,0,0,0,0,0,0,0,0,0.195984794828755,0,0.34945333648406,0,0,0.146178634172371,0.0821154570532092,0.484945082442097,0,0,0,0,0,0.391102765469606,0.0801588202515337,0.640358984218058,0,0,0.114536596165916,0.171594997861965,0,0,0,0.135904206073614,0,0,0,0,0,0,0,0,0.279282401272254,0,0,0,0,0,0,0.720599767084807,0,0,0,0,0,0,0,0,0.160753148465019,0,0,0.449947783103001,0,0.0607495566580247,1.0063040627978,0.236417121897595,0.104909176269996,0,0,0,0,0.662091970365432,0,0.542999601753713,0,0.326587360109409,0,0,0.340776043570843,0,0.732761168390412,0,0.387848869084652,0,0,0,0.640724475406168,0,0.414239055347196,1.48849806543585,0,0,0,0,0,0,0.327872630709804,0,0,0.122026264901963,0.3755727921195,0,0.332787154610557,0.18628920882415,0,0,0.303298235083296,0,0,0,0,0.447764408660622,0,0,0,0,0,0,0.151230923763239,0,0,0,0,0,0.414706207840855,0,0.521745061811734,0,0,0.406870733204662,0.363697318405119,0.214821114084977,0.464033759878494,0.398095888698616,0,0,0,0,0,0.214441591374926,0,0,0.231522474323834,0,0,0,0,0.176689145945881,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0.192687675289379,0,0,0.615349092722265,0,0,0.161475645631851,0,0,0,0,0.115525666150338,0.381382095467167,0,0,0.376051641746286,0.60511520611056,0,0,0,0.443568258651136,0.337687923091973,0,0.620060389503552,0.19024743058172,0,0,0,0,0.127762427639595,0,0.336283722218824,0,0.455324382702595,0.177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| ||
|short_description=p14@UBL3 | |short_description=p14@UBL3 | ||
}} | }} |
Latest revision as of 01:32, 17 September 2015
Short description: | p14@UBL3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_14_at_UBL3_5end |
Coexpression cluster: | NA |
Association with transcript: | 136bp_to_BC059385_5end |
EntrezGene: | UBL3 |
HGNC: | 12504 |
UniProt: | O95164 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 3.38e-25 | 3 |
extraembryonic cell | 1.29e-15 | 19 |
amnion mesenchymal stem cell | 2.02e-15 | 5 |
endothelial cell of sinusoid | 2.27e-10 | 2 |
endothelial cell of hepatic sinusoid | 2.27e-10 | 2 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 3.38e-25 | 3 |
extraembryonic membrane | 4.85e-21 | 14 |
membranous layer | 4.85e-21 | 14 |
lymph node | 1.88e-19 | 1 |
extraembryonic structure | 1.93e-12 | 24 |
chorion | 2.18e-11 | 7 |
amnion | 2.69e-11 | 7 |
dorsal plus ventral thalamus | 1.89e-10 | 2 |
thalamic complex | 1.89e-10 | 2 |
hepatic sinusoid | 2.27e-10 | 2 |
abdomen blood vessel | 2.27e-10 | 2 |
sinusoid | 2.27e-10 | 2 |
abdominal segment blood vessel | 2.27e-10 | 2 |
somatic layer of lateral plate mesoderm | 5.29e-10 | 8 |
liver parenchyma | 2.47e-07 | 3 |
liver lobule | 2.47e-07 | 3 |
hepatic duct | 2.47e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
skin squamous cell carcinoma | 5.62e-19 | 1 |
keratoacanthoma | 5.62e-19 | 1 |
skin carcinoma | 3.58e-10 | 2 |
skin cancer | 3.58e-10 | 2 |
integumentary system cancer | 3.58e-10 | 2 |