FFCP PHASE1:Hg19::chr11:18034549..18034601,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=26297 | |EntrezGene=26297 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17499 | |HGNC=17499 | ||
|TSSclassifier=strong | |||
|UniProt=E9PIU4,G3V1B4 | |UniProt=E9PIU4,G3V1B4 | ||
|association_with_transcript=0bp_to_ENST00000524716,ENST00000525422,ENST00000528200_5end | |association_with_transcript=0bp_to_ENST00000524716,ENST00000525422,ENST00000528200_5end | ||
|cluster_id=chr11:18034549..18034601,- | |||
|description=CAGE_peak_1_at_SERGEF_5end | |description=CAGE_peak_1_at_SERGEF_5end | ||
|id=chr11:18034549..18034601,- | |id=chr11:18034549..18034601,- | ||
|ontology_enrichment_celltype=CL:0000542!2.10e-15!53;CL:0000051!2.10e-15!53;CL:0000838!3.42e-15!52;CL:0000791!6.42e-11!18;CL:0000789!6.42e-11!18;CL:0002420!6.42e-11!18;CL:0002419!6.42e-11!18;CL:0000790!6.42e-11!18;CL:0000084!8.74e-09!25;CL:0000827!8.74e-09!25;CL:0000236!2.92e-07!14;CL:0000625!3.41e-07!11;CL:0000945!6.96e-07!24;CL:0000826!6.96e-07!24;CL:0002087!8.26e-07!119;CL:0000738!9.96e-07!140 | |ontology_enrichment_celltype=CL:0000542!2.10e-15!53;CL:0000051!2.10e-15!53;CL:0000838!3.42e-15!52;CL:0000791!6.42e-11!18;CL:0000789!6.42e-11!18;CL:0002420!6.42e-11!18;CL:0002419!6.42e-11!18;CL:0000790!6.42e-11!18;CL:0000084!8.74e-09!25;CL:0000827!8.74e-09!25;CL:0000236!2.92e-07!14;CL:0000625!3.41e-07!11;CL:0000945!6.96e-07!24;CL:0000826!6.96e-07!24;CL:0002087!8.26e-07!119;CL:0000738!9.96e-07!140 | ||
|ontology_enrichment_celltype_v019=CL:0000791;3.31e-11;18!CL:0000789;3.31e-11;18!CL:0002419;3.31e-11;18!CL:0000542;2.32e-09;53!CL:0000084;4.25e-09;25!CL:0000625;2.08e-07;11!CL:0000236;2.67e-07;13 | |ontology_enrichment_celltype_v019=CL:0000791;3.31e-11;18!CL:0000789;3.31e-11;18!CL:0002419;3.31e-11;18!CL:0000542;2.32e-09;53!CL:0000084;4.25e-09;25!CL:0000625;2.08e-07;11!CL:0000236;2.67e-07;13 | ||
|ontology_enrichment_celltype_v019_2=CL:0000542,2.10e-15,53;CL:0000051,2.10e-15,53;CL:0000838,3.42e-15,52;CL:0000791,6.42e-11,18;CL:0000789,6.42e-11,18;CL:0002420,6.42e-11,18;CL:0002419,6.42e-11,18;CL:0000790,6.42e-11,18;CL:0000084,8.74e-09,25;CL:0000827,8.74e-09,25;CL:0000236,2.92e-07,14;CL:0000625,3.41e-07,11;CL:0002087,4.22e-07,115;CL:0000738,5.57e-07,136;CL:0000945,6.96e-07,24;CL:0000826,6.96e-07,24 | |||
|ontology_enrichment_development_v019=CL:0000790;3.31e-11;18!CL:0000051;2.32e-09;53 | |ontology_enrichment_development_v019=CL:0000790;3.31e-11;18!CL:0000051;2.32e-09;53 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p1@SERGEF | |short_description=p1@SERGEF | ||
}} | }} |
Latest revision as of 01:37, 17 September 2015
Short description: | p1@SERGEF |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SERGEF_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000524716, ENST00000525422, ENST00000528200_5end |
EntrezGene: | SERGEF |
HGNC: | 17499 |
UniProt: | E9PIU4G3V1B4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 2.10e-15 | 53 |
common lymphoid progenitor | 2.10e-15 | 53 |
lymphoid lineage restricted progenitor cell | 3.42e-15 | 52 |
mature alpha-beta T cell | 6.42e-11 | 18 |
alpha-beta T cell | 6.42e-11 | 18 |
immature T cell | 6.42e-11 | 18 |
mature T cell | 6.42e-11 | 18 |
immature alpha-beta T cell | 6.42e-11 | 18 |
T cell | 8.74e-09 | 25 |
pro-T cell | 8.74e-09 | 25 |
B cell | 2.92e-07 | 14 |
CD8-positive, alpha-beta T cell | 3.41e-07 | 11 |
nongranular leukocyte | 4.22e-07 | 115 |
leukocyte | 5.57e-07 | 136 |
lymphocyte of B lineage | 6.96e-07 | 24 |
pro-B cell | 6.96e-07 | 24 |