FFCP PHASE1:Hg19::chr11:1856158..1856161,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=90019 | |EntrezGene=90019 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19264 | |HGNC=19264 | ||
|TSSclassifier=strong | |||
|UniProt=F8WBL4 | |UniProt=F8WBL4 | ||
|association_with_transcript=-59bp_to_ENST00000424556_5end | |||
|cluster_id=chr11:1856158..1856161,+ | |||
|coexpression_cluster_id=C1138 | |||
|description=CAGE_peak_7_at_SYT8_5end | |||
|id=chr11:1856158..1856161,+ | |||
|ontology_enrichment_celltype=CL:0002076!2.78e-14!43;CL:0002327!2.82e-11!4;CL:0000223!1.18e-09!59;CL:0000575!1.77e-09!2;CL:0002368!2.59e-08!13 | |||
|ontology_enrichment_celltype_v019=CL:0002327;2.02e-27;4!CL:0002076;6.85e-09;42!CL:1000415;3.92e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002327,1.18e-27,4;CL:0002076,1.13e-09,42;CL:1000415,3.09e-07,2;CL:0000066,3.12e-07,253;CL:0000223,6.74e-07,58 | |||
|ontology_enrichment_development_v019=UBERON:0006242;5.37e-13;1!UBERON:0008814;3.92e-07;2!UBERON:0010056;3.92e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4929;3.92e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:4929,4.69e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0001911!2.82e-11!4;UBERON:0005333!2.82e-11!4;UBERON:0008425!2.82e-11!4;UBERON:0005311!2.82e-11!4;UBERON:0002294!1.20e-10!7;UBERON:0001173!1.20e-10!7;UBERON:0004912!1.20e-10!7;UBERON:0004119!5.45e-10!169;UBERON:0000925!5.45e-10!169;UBERON:0006595!5.45e-10!169;UBERON:0003729!1.49e-08!5;UBERON:0002110!5.03e-07!3;UBERON:0006242!5.03e-07!3;UBERON:0000161!9.78e-07!35 | |||
|ontology_enrichment_uberon_v019=UBERON:0001911;2.02e-27;4!UBERON:0002294;8.49e-27;7!UBERON:0001173;8.49e-27;7!UBERON:0000974;4.71e-18;6!UBERON:0002110;1.74e-16;3!UBERON:0004913;5.37e-13;1!UBERON:0003703;5.37e-13;1!UBERON:0001174;5.37e-13;1!UBERON:0004914;5.37e-13;1!UBERON:0003343;1.31e-12;4!UBERON:0002394;1.31e-12;4!UBERON:0004785;1.31e-12;4!UBERON:0003928;1.31e-12;4!UBERON:0002423;1.08e-07;25!UBERON:0000341;3.92e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001911,1.18e-27,4;UBERON:0005333,1.18e-27,4;UBERON:0008425,1.18e-27,4;UBERON:0005311,1.18e-27,4;UBERON:0002294,7.36e-21,9;UBERON:0001173,7.36e-21,9;UBERON:0004912,7.36e-21,9;UBERON:0002110,2.04e-16,3;UBERON:0006242,2.04e-16,3;UBERON:0000076,3.71e-14,8;UBERON:0004913,7.68e-13,1;UBERON:0003703,7.68e-13,1;UBERON:0001174,7.68e-13,1;UBERON:0004914,7.68e-13,1;UBERON:0003343,9.76e-13,4;UBERON:0004785,9.76e-13,4;UBERON:0000974,3.88e-11,10;UBERON:0002394,1.08e-08,6;UBERON:0003928,1.08e-08,6;UBERON:0009497,1.14e-07,25;UBERON:0000015,1.14e-07,25;UBERON:0002423,1.14e-07,25;UBERON:0006235,1.14e-07,25;UBERON:0004161,1.14e-07,25;UBERON:0000341,4.17e-07,2 | |||
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| ||
|short_description=p7@SYT8 | |||
}} | }} |
Latest revision as of 02:57, 17 September 2015
Short description: | p7@SYT8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_SYT8_5end |
Coexpression cluster: | C1138_Mammary_salivary_glassy_gall_Small_oral_throat |
Association with transcript: | -59bp_to_ENST00000424556_5end |
EntrezGene: | SYT8 |
HGNC: | 19264 |
UniProt: | F8WBL4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mammary gland epithelial cell | 1.18e-27 | 4 |
endo-epithelial cell | 1.13e-09 | 42 |
epithelial cell of gall bladder | 3.09e-07 | 2 |
epithelial cell | 3.12e-07 | 253 |
endodermal cell | 6.74e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
mammary gland | 1.18e-27 | 4 |
mammary bud | 1.18e-27 | 4 |
mammary ridge | 1.18e-27 | 4 |
mammary placode | 1.18e-27 | 4 |
biliary system | 7.36e-21 | 9 |
biliary tree | 7.36e-21 | 9 |
biliary bud | 7.36e-21 | 9 |
gallbladder | 2.04e-16 | 3 |
gall bladder primordium | 2.04e-16 | 3 |
external ectoderm | 3.71e-14 | 8 |
hepatopancreatic ampulla | 7.68e-13 | 1 |
extrahepatic bile duct | 7.68e-13 | 1 |
common bile duct | 7.68e-13 | 1 |
duodenal papilla | 7.68e-13 | 1 |
mucosa of oral region | 9.76e-13 | 4 |
respiratory system mucosa | 9.76e-13 | 4 |
neck | 3.88e-11 | 10 |
bile duct | 1.08e-08 | 6 |
digestive system duct | 1.08e-08 | 6 |
epithelium of foregut-midgut junction | 1.14e-07 | 25 |
anatomical boundary | 1.14e-07 | 25 |
hepatobiliary system | 1.14e-07 | 25 |
foregut-midgut junction | 1.14e-07 | 25 |
septum transversum | 1.14e-07 | 25 |
throat | 4.17e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
tubular adenocarcinoma | 4.69e-07 | 2 |