FFCP PHASE1:Hg19::chr6:20402098..20402101,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr6:20402098..20402101,+
|short_description=p9@E2F3
|description=CAGE_peak_9_at_E2F3_5end
|association_with_transcript=-35bp_to_ENST00000378646,NM_001949,uc003...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1871 | |EntrezGene=1871 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3115 | |HGNC=3115 | ||
|TSSclassifier=strong | |||
|UniProt=F5H536,O00716 | |UniProt=F5H536,O00716 | ||
|association_with_transcript=-35bp_to_ENST00000378646,NM_001949,uc003ncz.2,uc003nda.2_5end | |||
|cluster_id=chr6:20402098..20402101,+ | |||
|description=CAGE_peak_9_at_E2F3_5end | |||
|id=chr6:20402098..20402101,+ | |||
|ontology_enrichment_celltype=CL:0000066!2.66e-07!254 | |||
|ontology_enrichment_celltype_v019=CL:0000817;2.54e-11;1!CL:0000037;2.54e-11;1!CL:1001319;2.54e-11;1!CL:1000600;2.54e-11;1!CL:0001024;2.54e-11;1!CL:0002188;6.43e-09;5 | |||
|ontology_enrichment_celltype_v019_2=CL:1001319,1.31e-11,1;CL:1000600,1.31e-11,1;CL:0001024,2.96e-11,1;CL:0002188,5.95e-09,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!2.77e-36!235;DOID:14566!1.40e-34!239;DOID:2531!1.11e-21!51;DOID:0060083!1.11e-21!51;DOID:0050686!1.28e-17!137;DOID:1240!2.01e-16!39;DOID:0050687!2.80e-14!143;DOID:305!3.02e-13!106;DOID:8692!3.39e-11!31;DOID:1036!7.31e-09!8;DOID:0060058!1.02e-07!10 | |||
|ontology_enrichment_disease_v019=DOID:1036;3.79e-20;8!DOID:1240;6.86e-13;39!DOID:1799;2.54e-11;1!DOID:10165;2.54e-11;1!DOID:1798;2.54e-11;1!DOID:9119;2.54e-11;1!DOID:2531;2.45e-10;51!DOID:0060083;2.45e-10;51!DOID:8692;6.25e-08;31 | |||
|ontology_enrichment_disease_v019_2=DOID:1036,9.26e-20,8;DOID:1240,3.17e-15,39;DOID:2531,1.79e-14,51;DOID:0060083,1.79e-14,51;DOID:9119,2.18e-11,1;DOID:1799,4.91e-11,1;DOID:10165,4.91e-11,1;DOID:1798,4.91e-11,1;DOID:0050686,1.80e-08,137;DOID:8692,7.56e-08,31 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0004645;2.54e-11;1!UBERON:0001256;2.54e-11;1!UBERON:0001259;2.54e-11;1!UBERON:0000489;1.25e-08;29!UBERON:0006554;2.45e-08;30!UBERON:0001008;2.45e-08;30!UBERON:0002113;5.46e-07;24!UBERON:0011143;5.46e-07;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004645,1.31e-11,1;UBERON:0001256,1.31e-11,1;UBERON:0001259,1.31e-11,1;UBERON:0000489,4.05e-08,31 | |||
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| ||
|short_description=p9@E2F3 | |||
}} | }} |
Latest revision as of 03:03, 17 September 2015
Short description: | p9@E2F3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_E2F3_5end |
Coexpression cluster: | NA |
Association with transcript: | -35bp_to_ENST00000378646, NM_001949, uc003ncz.2, uc003nda.2_5end |
EntrezGene: | E2F3 |
HGNC: | 3115 |
UniProt: | F5H536O00716 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bladder cell | 1.31e-11 | 1 |
lower urinary tract cell | 1.31e-11 | 1 |
CD34-positive, CD38-negative hematopoietic stem cell | 2.96e-11 | 1 |
glomerular endothelial cell | 5.95e-09 | 5 |
Ontology term | p-value | n |
---|---|---|
urinary bladder urothelium | 1.31e-11 | 1 |
wall of urinary bladder | 1.31e-11 | 1 |
mucosa of urinary bladder | 1.31e-11 | 1 |
cavitated compound organ | 4.05e-08 | 31 |
Ontology term | p-value | n |
---|---|---|
chronic leukemia | 9.26e-20 | 8 |
leukemia | 3.17e-15 | 39 |
hematologic cancer | 1.79e-14 | 51 |
immune system cancer | 1.79e-14 | 51 |
acute myeloid leukemia | 2.18e-11 | 1 |
islet cell tumor | 4.91e-11 | 1 |
endocrine pancreas cancer | 4.91e-11 | 1 |
pancreatic endocrine carcinoma | 4.91e-11 | 1 |
organ system cancer | 1.80e-08 | 137 |
myeloid leukemia | 7.56e-08 | 31 |