FFCP PHASE1:Hg19::chr6:20534672..20534745,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54901 | |EntrezGene=54901 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21050 | |HGNC=21050 | ||
|TSSclassifier=strong | |||
|UniProt=Q5VV42 | |UniProt=Q5VV42 | ||
|association_with_transcript=0bp_to_ENST00000274695,ENST00000378624,NM_017774,uc003ndb.1,uc003ndc.1,uc003ndd.1,uc003nde.1,uc010jpo.1_5end | |association_with_transcript=0bp_to_ENST00000274695,ENST00000378624,NM_017774,uc003ndb.1,uc003ndc.1,uc003ndd.1,uc003nde.1,uc010jpo.1_5end | ||
|cluster_id=chr6:20534672..20534745,+ | |||
|description=CAGE_peak_1_at_CDKAL1_5end | |description=CAGE_peak_1_at_CDKAL1_5end | ||
|id=chr6:20534672..20534745,+ | |id=chr6:20534672..20534745,+ | ||
|ontology_enrichment_celltype=CL:0000838!1.57e-16!52;CL:0000542!1.22e-15!53;CL:0000051!1.22e-15!53;CL:0000037!4.17e-14!172;CL:0000566!4.17e-14!172;CL:0000988!1.92e-12!182;CL:0002032!1.03e-11!165;CL:0000837!1.03e-11!165;CL:0000738!2.21e-10!140;CL:0000084!2.76e-10!25;CL:0000827!2.76e-10!25;CL:0000791!5.10e-10!18;CL:0000789!5.10e-10!18;CL:0002420!5.10e-10!18;CL:0002419!5.10e-10!18;CL:0000790!5.10e-10!18;CL:0002031!6.41e-10!124;CL:0002087!3.36e-09!119 | |ontology_enrichment_celltype=CL:0000838!1.57e-16!52;CL:0000542!1.22e-15!53;CL:0000051!1.22e-15!53;CL:0000037!4.17e-14!172;CL:0000566!4.17e-14!172;CL:0000988!1.92e-12!182;CL:0002032!1.03e-11!165;CL:0000837!1.03e-11!165;CL:0000738!2.21e-10!140;CL:0000084!2.76e-10!25;CL:0000827!2.76e-10!25;CL:0000791!5.10e-10!18;CL:0000789!5.10e-10!18;CL:0002420!5.10e-10!18;CL:0002419!5.10e-10!18;CL:0000790!5.10e-10!18;CL:0002031!6.41e-10!124;CL:0002087!3.36e-09!119 | ||
|ontology_enrichment_celltype_v019=CL:0000084;3.17e-10;25!CL:0000791;5.20e-10;18!CL:0000789;5.20e-10;18!CL:0002419;5.20e-10;18!CL:0000542;8.02e-10;53!CL:0000236;8.27e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,1.57e-16,52;CL:0000542,1.22e-15,53;CL:0000051,1.22e-15,53;CL:0000037,1.22e-14,168;CL:0000988,2.69e-13,177;CL:0002032,3.42e-12,161;CL:0000837,3.42e-12,161;CL:0000738,7.09e-11,136;CL:0002031,1.92e-10,120;CL:0000084,2.76e-10,25;CL:0000827,2.76e-10,25;CL:0000791,5.10e-10,18;CL:0000789,5.10e-10,18;CL:0002420,5.10e-10,18;CL:0002419,5.10e-10,18;CL:0000790,5.10e-10,18;CL:0002087,1.04e-09,115 | |||
|ontology_enrichment_development_v019=CL:0000790;5.20e-10;18!CL:0000051;8.02e-10;53 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.77e-08!115 | |ontology_enrichment_uberon=UBERON:0007023!1.77e-08!115 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.35e-08,114 | |||
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21.4780889843166 | ||
|short_description=p1@CDKAL1 | |short_description=p1@CDKAL1 | ||
}} | }} |
Latest revision as of 03:10, 17 September 2015
Short description: | p1@CDKAL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CDKAL1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000274695, ENST00000378624, NM_017774, uc003ndb.1, uc003ndc.1, uc003ndd.1, uc003nde.1, uc010jpo.1_5end |
EntrezGene: | CDKAL1 |
HGNC: | 21050 |
UniProt: | Q5VV42 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 1.57e-16 | 52 |
lymphocyte | 1.22e-15 | 53 |
common lymphoid progenitor | 1.22e-15 | 53 |
hematopoietic stem cell | 1.22e-14 | 168 |
hematopoietic cell | 2.69e-13 | 177 |
hematopoietic oligopotent progenitor cell | 3.42e-12 | 161 |
hematopoietic multipotent progenitor cell | 3.42e-12 | 161 |
leukocyte | 7.09e-11 | 136 |
hematopoietic lineage restricted progenitor cell | 1.92e-10 | 120 |
T cell | 2.76e-10 | 25 |
pro-T cell | 2.76e-10 | 25 |
mature alpha-beta T cell | 5.10e-10 | 18 |
alpha-beta T cell | 5.10e-10 | 18 |
immature T cell | 5.10e-10 | 18 |
mature T cell | 5.10e-10 | 18 |
immature alpha-beta T cell | 5.10e-10 | 18 |
nongranular leukocyte | 1.04e-09 | 115 |
Ontology term | p-value | n |
---|---|---|
adult organism | 2.35e-08 | 114 |