FFCP PHASE1:Hg19::chr6:20534750..20534765,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr6:20534750..20534765,+ to FFCP PHASE1:Hg19::chr6:20534750..20534765,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=54901 | |EntrezGene=54901 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21050 | |HGNC=21050 | ||
|TSSclassifier=strong | |||
|UniProt=Q5VV42 | |UniProt=Q5VV42 | ||
|association_with_transcript=62bp_to_ENST00000274695,ENST00000378624,NM_017774,uc003ndb.1,uc003ndc.1,uc003ndd.1,uc003nde.1,uc010jpo.1_5end | |||
|cluster_id=chr6:20534750..20534765,+ | |||
|description=CAGE_peak_2_at_CDKAL1_5end | |||
|id=chr6:20534750..20534765,+ | |||
|ontology_enrichment_celltype=CL:0000542!1.55e-18!53;CL:0000051!1.55e-18!53;CL:0000838!5.01e-18!52;CL:0000037!2.82e-15!172;CL:0000566!2.82e-15!172;CL:0000988!5.51e-15!182;CL:0002032!2.42e-13!165;CL:0000837!2.42e-13!165;CL:0000738!5.45e-11!140;CL:0000945!2.76e-09!24;CL:0000826!2.76e-09!24;CL:0002031!3.82e-09!124;CL:0002087!1.17e-08!119;CL:0000084!1.27e-08!25;CL:0000827!1.27e-08!25;CL:0000791!6.17e-07!18;CL:0000789!6.17e-07!18;CL:0002420!6.17e-07!18;CL:0002419!6.17e-07!18;CL:0000790!6.17e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:0000542;2.96e-13;53!CL:0000945;4.89e-11;24!CL:0000084;1.57e-09;25!CL:0000236;7.19e-09;13!CL:0000791;2.53e-07;18!CL:0000789;2.53e-07;18!CL:0002419;2.53e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,4.42e-22,53;CL:0000051,4.42e-22,53;CL:0000838,1.85e-21,52;CL:0000988,7.99e-16,177;CL:0000037,1.32e-15,168;CL:0002032,1.18e-13,161;CL:0000837,1.18e-13,161;CL:0000738,8.78e-12,136;CL:0000945,7.45e-11,24;CL:0000826,7.45e-11,24;CL:0000084,4.07e-10,25;CL:0000827,4.07e-10,25;CL:0002031,3.98e-09,120;CL:0002087,5.62e-09,115;CL:0000791,4.64e-08,18;CL:0000789,4.64e-08,18;CL:0002420,4.64e-08,18;CL:0002419,4.64e-08,18;CL:0000790,4.64e-08,18;CL:0000236,8.37e-08,14 | |||
|ontology_enrichment_development_v019=CL:0000051;2.96e-13;53!CL:0000790;2.53e-07;18 | |||
|ontology_enrichment_disease=DOID:2531!1.74e-09!51;DOID:0060083!1.74e-09!51 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:2531,6.78e-10,51;DOID:0060083,6.78e-10,51 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p2@CDKAL1 | |||
}} | }} |
Latest revision as of 03:10, 17 September 2015
Short description: | p2@CDKAL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CDKAL1_5end |
Coexpression cluster: | NA |
Association with transcript: | 62bp_to_ENST00000274695, ENST00000378624, NM_017774, uc003ndb.1, uc003ndc.1, uc003ndd.1, uc003nde.1, uc010jpo.1_5end |
EntrezGene: | CDKAL1 |
HGNC: | 21050 |
UniProt: | Q5VV42 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 4.42e-22 | 53 |
common lymphoid progenitor | 4.42e-22 | 53 |
lymphoid lineage restricted progenitor cell | 1.85e-21 | 52 |
hematopoietic cell | 7.99e-16 | 177 |
hematopoietic stem cell | 1.32e-15 | 168 |
hematopoietic oligopotent progenitor cell | 1.18e-13 | 161 |
hematopoietic multipotent progenitor cell | 1.18e-13 | 161 |
leukocyte | 8.78e-12 | 136 |
lymphocyte of B lineage | 7.45e-11 | 24 |
pro-B cell | 7.45e-11 | 24 |
T cell | 4.07e-10 | 25 |
pro-T cell | 4.07e-10 | 25 |
hematopoietic lineage restricted progenitor cell | 3.98e-09 | 120 |
nongranular leukocyte | 5.62e-09 | 115 |
mature alpha-beta T cell | 4.64e-08 | 18 |
alpha-beta T cell | 4.64e-08 | 18 |
immature T cell | 4.64e-08 | 18 |
mature T cell | 4.64e-08 | 18 |
immature alpha-beta T cell | 4.64e-08 | 18 |
B cell | 8.37e-08 | 14 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 6.78e-10 | 51 |
immune system cancer | 6.78e-10 | 51 |