FFCP PHASE1:Hg19::chr1:152486950..152486964,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:152486950..152486964,+ to FFCP PHASE1:Hg19::chr1:152486950..152486964,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=54544 | |EntrezGene=54544 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29875 | |HGNC=29875 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UGL9 | |UniProt=Q9UGL9 | ||
|association_with_transcript=-13bp_to_ENST00000368790,NM_019060,uc001ezz.2_5end | |||
|cluster_id=chr1:152486950..152486964,+ | |||
|coexpression_cluster_id=C60 | |||
|description=CAGE_peak_1_at_CRCT1_5end | |||
|id=chr1:152486950..152486964,+ | |||
|ontology_enrichment_celltype=CL:0002076!1.05e-16!43;CL:0002159!2.04e-14!13;CL:0002368!3.47e-14!13;CL:0000223!1.40e-12!59;CL:0000066!4.97e-12!254;CL:0000622!1.99e-10!5;CL:0000244!8.66e-09!4;CL:0000731!8.66e-09!4;CL:0002077!9.79e-09!33;CL:0000154!1.37e-08!6;CL:0002202!5.56e-08!9;CL:0002632!5.56e-08!9;CL:0002251!2.44e-07!21;CL:0002328!3.89e-07!3;CL:0002621!4.75e-07!3;CL:0000068!5.35e-07!3;CL:0000069!5.35e-07!3;CL:0000307!5.35e-07!3;CL:0000377!5.35e-07!3;CL:0002623!7.91e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002368;1.07e-21;13!CL:0002159;2.42e-20;14!CL:0002076;3.52e-20;42!CL:0000622;3.28e-15;5!CL:0000244;1.04e-12;4!CL:0000731;1.04e-12;4!CL:0000154;1.29e-12;6!CL:0002202;4.97e-12;9!CL:0002632;4.97e-12;9!CL:0002077;7.53e-11;34!CL:0002251;2.21e-10;20!CL:0002328;3.52e-10;3!CL:0002621;4.85e-10;3!CL:0000307;5.81e-10;3!CL:0002623;1.14e-09;3!CL:0002166;1.49e-09;3!CL:0000362;1.57e-08;9!CL:0000150;2.76e-08;9!CL:0000240;2.85e-08;6!CL:0000311;2.85e-08;6!CL:0000079;2.85e-08;6!CL:0000237;2.85e-08;6!CL:0000575;1.44e-07;2!CL:0000317;3.14e-07;2!CL:1000448;3.14e-07;2!CL:0002308;3.14e-07;2!CL:0002140;3.14e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,3.24e-26,42;CL:0002368,1.09e-21,13;CL:0002159,2.55e-20,14;CL:0000223,1.97e-17,58;CL:0000622,3.04e-15,5;CL:0000244,1.02e-12,4;CL:0000731,1.02e-12,4;CL:0000154,1.21e-12,6;CL:0002077,2.19e-12,34;CL:0002202,5.02e-12,9;CL:0002632,5.02e-12,9;CL:0000066,5.29e-12,253;CL:0002251,2.16e-10,20;CL:0002328,3.57e-10,3;CL:0002621,4.85e-10,3;CL:0000068,5.81e-10,3;CL:0000069,5.81e-10,3;CL:0000307,5.81e-10,3;CL:0000377,5.81e-10,3;CL:0002623,1.06e-09,3;CL:0002166,1.56e-09,3;CL:0000362,1.60e-08,9;CL:0000240,2.64e-08,6;CL:0000311,2.64e-08,6;CL:0000079,2.64e-08,6;CL:0000237,2.64e-08,6;CL:0000036,2.64e-08,6;CL:0000357,2.64e-08,6;CL:0000114,2.64e-08,6;CL:0000150,2.66e-08,9;CL:0000575,1.44e-07,2;CL:0000317,3.14e-07,2;CL:1000448,3.14e-07,2;CL:0002308,3.14e-07,2;CL:0002140,3.14e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000223;2.92e-10;58!CL:0000377;5.81e-10;3!CL:0000357;2.85e-08;6!CL:0000114;2.85e-08;6!UBERON:0008814;5.26e-07;2!UBERON:0010056;5.26e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001004!2.01e-13!72;UBERON:0000161!9.59e-12!35;UBERON:0000166!2.95e-11!21;UBERON:0003102!5.96e-11!95;UBERON:0004119!3.41e-10!169;UBERON:0000925!3.41e-10!169;UBERON:0006595!3.41e-10!169;UBERON:0000165!4.38e-09!28;UBERON:0000930!4.38e-09!28;UBERON:0000065!2.14e-08!53;UBERON:0000464!2.28e-08!104;UBERON:0007196!4.80e-08!14;UBERON:0001558!4.80e-08!14;UBERON:0001444!1.94e-07!48;UBERON:0004815!3.89e-07!3;UBERON:0002031!3.89e-07!3;UBERON:0001949!4.75e-07!3;UBERON:0001723!4.84e-07!3;UBERON:0001033!4.84e-07!3;UBERON:0010056!4.84e-07!3;UBERON:0000064!5.31e-07!219;UBERON:0000365!5.47e-07!5;UBERON:0003126!6.24e-07!7;UBERON:0001005!6.24e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0000165;6.28e-13;28!UBERON:0000486;8.48e-12;12!UBERON:0000161;3.62e-11;19!UBERON:0000166;3.62e-11;19!UBERON:0004815;3.52e-10;3!UBERON:0002031;3.52e-10;3!UBERON:0000365;3.62e-10;5!UBERON:0001723;4.29e-10;3!UBERON:0001033;4.29e-10;3!UBERON:0001949;4.85e-10;3!UBERON:0007196;3.44e-09;15!UBERON:0001558;3.44e-09;15!UBERON:0005910;1.81e-08;6!UBERON:0001044;5.61e-08;6!UBERON:0003293;5.61e-08;6!UBERON:0003294;5.61e-08;6!UBERON:0010047;5.61e-08;6!UBERON:0003408;5.61e-08;6!UBERON:0000167;5.61e-08;6!UBERON:0001708;2.94e-07;4!UBERON:0008895;2.94e-07;4!UBERON:0002419;3.14e-07;2!UBERON:0007771;3.14e-07;2!UBERON:0003297;3.14e-07;2!UBERON:0001821;3.14e-07;2!UBERON:0003487;3.14e-07;2!UBERON:0001820;3.14e-07;2!UBERON:0001041;3.56e-07;14!UBERON:0003126;3.80e-07;7!UBERON:0001005;3.80e-07;7!UBERON:0001003;5.96e-07;15!UBERON:0007376;5.96e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003102,3.01e-15,99;UBERON:0000166,1.45e-14,22;UBERON:0001004,3.83e-14,74;UBERON:0000165,2.07e-12,29;UBERON:0000930,2.07e-12,29;UBERON:0000033,1.98e-11,56;UBERON:0000153,2.07e-11,62;UBERON:0007811,2.07e-11,62;UBERON:0000161,2.12e-11,36;UBERON:0004119,5.51e-11,160;UBERON:0000925,5.51e-11,160;UBERON:0006595,5.51e-11,160;UBERON:0004815,3.57e-10,3;UBERON:0002031,3.57e-10,3;UBERON:0000365,3.58e-10,5;UBERON:0001949,4.85e-10,3;UBERON:0001723,5.00e-10,3;UBERON:0001033,5.00e-10,3;UBERON:0010056,5.00e-10,3;UBERON:0007196,3.49e-09,15;UBERON:0001558,3.49e-09,15;UBERON:0000065,3.65e-09,54;UBERON:0001444,6.14e-09,49;UBERON:0005910,1.79e-08,6;UBERON:0001044,5.15e-08,6;UBERON:0003293,5.15e-08,6;UBERON:0003294,5.15e-08,6;UBERON:0010047,5.15e-08,6;UBERON:0000167,5.15e-08,6;UBERON:0001708,3.03e-07,4;UBERON:0008895,3.03e-07,4;UBERON:0002419,3.14e-07,2;UBERON:0007771,3.14e-07,2;UBERON:0003297,3.14e-07,2;UBERON:0001821,3.14e-07,2;UBERON:0003487,3.14e-07,2;UBERON:0001820,3.14e-07,2;UBERON:0005089,3.14e-07,2;UBERON:0005088,3.14e-07,2;UBERON:0003126,3.84e-07,7;UBERON:0001005,3.84e-07,7;UBERON:0001003,6.02e-07,15;UBERON:0007376,6.02e-07,15;UBERON:0007383,6.02e-07,15 | |||
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| ||
|short_description=p1@CRCT1 | |||
}} | }} |
Latest revision as of 03:33, 17 September 2015
Short description: | p1@CRCT1 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CRCT1_5end |
Coexpression cluster: | C60_esophagus_tonsil_throat_tongue_uterus_cervix_cervical |
Association with transcript: | -13bp_to_ENST00000368790, NM_019060, uc001ezz.2_5end |
EntrezGene: | CRCT1 |
HGNC: | 29875 |
UniProt: | Q9UGL9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data