FFCP PHASE1:Hg19::chr6:21201020..21201041,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54901 | |EntrezGene=54901 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21050 | |HGNC=21050 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-1bp_to_ENST00000476517_5end | |association_with_transcript=-1bp_to_ENST00000476517_5end | ||
|cluster_id=chr6:21201020..21201041,+ | |||
|coexpression_cluster_id=C97 | |coexpression_cluster_id=C97 | ||
|description=CAGE_peak_4_at_CDKAL1_5end | |description=CAGE_peak_4_at_CDKAL1_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0005020!1.52e-16!6;CL:0002138!1.52e-16!6;CL:0005022!1.52e-16!6;CL:0002621!2.36e-08!3 | |ontology_enrichment_celltype=CL:0005020!1.52e-16!6;CL:0002138!1.52e-16!6;CL:0005022!1.52e-16!6;CL:0002621!2.36e-08!3 | ||
|ontology_enrichment_celltype_v019=CL:0002138;6.02e-38;6!CL:1001319;2.38e-15;1!CL:1000600;2.38e-15;1!CL:0002139;9.63e-15;24!CL:0000115;1.50e-12;36!CL:0002078;5.97e-10;45!CL:0000047;2.48e-08;2 | |ontology_enrichment_celltype_v019=CL:0002138;6.02e-38;6!CL:1001319;2.38e-15;1!CL:1000600;2.38e-15;1!CL:0002139;9.63e-15;24!CL:0000115;1.50e-12;36!CL:0002078;5.97e-10;45!CL:0000047;2.48e-08;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0005020,7.30e-38,6;CL:0002138,7.30e-38,6;CL:0005022,7.30e-38,6;CL:1001319,1.54e-15,1;CL:1000600,1.54e-15,1;CL:0002139,9.91e-15,24;CL:0000115,7.61e-14,36;CL:0002078,5.01e-11,45;CL:0000213,1.72e-08,58;CL:0000215,1.72e-08,58 | |||
|ontology_enrichment_development_v019=CL:0005022;6.02e-38;6!UBERON:0003124;8.02e-16;1 | |ontology_enrichment_development_v019=CL:0005022;6.02e-38;6!UBERON:0003124;8.02e-16;1 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:2355;1.24e-15;1!DOID:1325;2.86e-09;7!DOID:3904;2.86e-09;7!DOID:3910;1.44e-08;2!DOID:74;1.79e-08;2!DOID:3905;2.12e-07;9 | |ontology_enrichment_disease_v019=DOID:2355;1.24e-15;1!DOID:1325;2.86e-09;7!DOID:3904;2.86e-09;7!DOID:3910;1.44e-08;2!DOID:74;1.79e-08;2!DOID:3905;2.12e-07;9 | ||
|ontology_enrichment_disease_v019_2=DOID:2355,1.16e-15,1;DOID:1325,2.92e-09,7;DOID:3904,2.92e-09,7;DOID:3910,1.50e-08,2;DOID:74,1.73e-08,2;DOID:3905,2.15e-07,9 | |||
|ontology_enrichment_uberon=UBERON:0001473!3.54e-12!8;UBERON:0004536!3.54e-12!8;UBERON:0006558!3.54e-12!8;UBERON:0002465!1.48e-09!10;UBERON:0001949!2.36e-08!3 | |ontology_enrichment_uberon=UBERON:0001473!3.54e-12!8;UBERON:0004536!3.54e-12!8;UBERON:0006558!3.54e-12!8;UBERON:0002465!1.48e-09!10;UBERON:0001949!2.36e-08!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0001473;1.39e-28;8!UBERON:0004536;1.39e-28;8!UBERON:0006558;1.39e-28;8!UBERON:0002465;5.91e-23;10!UBERON:0004645;2.38e-15;1!UBERON:0001256;2.38e-15;1!UBERON:0001259;2.38e-15;1!UBERON:0002405;1.07e-08;27!UBERON:0004903;1.44e-08;2!UBERON:0002173;1.44e-08;2!UBERON:0002186;1.44e-08;2!UBERON:0001255;2.48e-08;2!UBERON:0001556;2.48e-08;2 | |ontology_enrichment_uberon_v019=UBERON:0001473;1.39e-28;8!UBERON:0004536;1.39e-28;8!UBERON:0006558;1.39e-28;8!UBERON:0002465;5.91e-23;10!UBERON:0004645;2.38e-15;1!UBERON:0001256;2.38e-15;1!UBERON:0001259;2.38e-15;1!UBERON:0002405;1.07e-08;27!UBERON:0004903;1.44e-08;2!UBERON:0002173;1.44e-08;2!UBERON:0002186;1.44e-08;2!UBERON:0001255;2.48e-08;2!UBERON:0001556;2.48e-08;2 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001473,1.60e-28,8;UBERON:0004536,1.60e-28,8;UBERON:0006558,1.60e-28,8;UBERON:0002465,6.62e-23,10;UBERON:0004645,1.54e-15,1;UBERON:0001256,1.54e-15,1;UBERON:0001259,1.54e-15,1;UBERON:0004903,1.50e-08,2;UBERON:0002173,1.50e-08,2;UBERON:0002186,1.50e-08,2;UBERON:0001255,2.00e-08,2;UBERON:0001556,2.00e-08,2 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0.0764134057479513,0,0.236132343941038,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03366703667732,3.5576626268671,0.66944122552934,1.20848795132744,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168776332241266,0,0,0,0,0,0,0,0.57978255948989,0.272746120590835,0.286804595389004,0,0,0.348581828608555,0.518305275076852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.695582429850461,0,1.15493158208859,2.31492756288305,0.951270761172991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0.26593811658487,0,0,0,0,0,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.76228387266739,1.30139853857622,0,0.335032530668698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,1.13733384070897,0.170093705276516,0,0,0,0,0,0,0.447749509444357,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.532306030317022,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0,0,0,0,0,0,0,0.655894752046633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.12549761487054,0,0,0,0,0,0,0,0.211125408127993,0,0,0,0,0.123084805461069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.347249989866585,0,0,0,0,0,0,0,0,0,0.113942055847001,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0.865554558968364,0,0,0.611030144933625,0,0,0,0.269604531922708,0,0.234264445725339,0,0,0,0,0,0.61214552326098,0,0.150323419414493,0,0,0,0,0,0.284609546029793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0.114536596165916,0.171594997861965,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.268733889946905,0,0,0,0,0,0,2.7095466261051,0,0,0,0.137539436597234,0,0,0,0.121499113316049,0,0,1.10154635083496,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213574825135389,0.943225830597996,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464033759878494,0,0,0,0,0,0,0,0,0,0.231522474323834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127894371303652,0,0,3.49470842214445,0,0,0,0,0,0,0,0,0,0.128458450192919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0634158101939068,0.546974809018219,0,0,0.175871244359621,0.127762427639595,0,0,0,0,3.10458295569236,0,0,0.135939465953663,0.0657727735628491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,11.7751017982005,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109265571963696,0,0.101988829741982,0,0.18378979906969,0.250707539292375,0.0757786982182394,0,0,0,0,0,0.0645889098360061,0.0620747142958579,0,0,0,0,0,0,0,0,1.46525883499754,0,0,0,0,0.122241444182866,0.813792356631477,0,0,0.641136984606466 | ||
|short_description=p4@CDKAL1 | |short_description=p4@CDKAL1 | ||
}} | }} |
Latest revision as of 03:35, 17 September 2015
Short description: | p4@CDKAL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_CDKAL1_5end |
Coexpression cluster: | C97_small_smallcell_gastrointestinal_argyrophil_putamen_duodenum_brain |
Association with transcript: | -1bp_to_ENST00000476517_5end |
EntrezGene: | CDKAL1 |
HGNC: | 21050 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphangioblast | 7.30e-38 | 6 |
endothelial cell of lymphatic vessel | 7.30e-38 | 6 |
vascular lymphangioblast | 7.30e-38 | 6 |
bladder cell | 1.54e-15 | 1 |
lower urinary tract cell | 1.54e-15 | 1 |
endothelial cell of vascular tree | 9.91e-15 | 24 |
endothelial cell | 7.61e-14 | 36 |
meso-epithelial cell | 5.01e-11 | 45 |
lining cell | 1.72e-08 | 58 |
barrier cell | 1.72e-08 | 58 |
Ontology term | p-value | n |
---|---|---|
lymphatic vessel | 1.60e-28 | 8 |
lymph vasculature | 1.60e-28 | 8 |
lymphatic part of lymphoid system | 1.60e-28 | 8 |
lymphoid system | 6.62e-23 | 10 |
urinary bladder urothelium | 1.54e-15 | 1 |
wall of urinary bladder | 1.54e-15 | 1 |
mucosa of urinary bladder | 1.54e-15 | 1 |
bronchoalveolar duct junction | 1.50e-08 | 2 |
alveolar duct | 1.50e-08 | 2 |
bronchiole | 1.50e-08 | 2 |
urinary bladder | 2.00e-08 | 2 |
lower urinary tract | 2.00e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
anemia | 1.16e-15 | 1 |
bronchus cancer | 2.92e-09 | 7 |
bronchogenic carcinoma | 2.92e-09 | 7 |
lung adenocarcinoma | 1.50e-08 | 2 |
hematopoietic system disease | 1.73e-08 | 2 |
lung carcinoma | 2.15e-07 | 9 |