FFCP PHASE1:Hg19::chr1:26348339..26348348,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2134 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3515 | |||
|TSSclassifier=strong | |||
|UniProt=Q92935 | |||
|association_with_transcript=68bp_to_ENST00000374280,NM_004455,uc001blf.2_5end | |||
|cluster_id=chr1:26348339..26348348,+ | |||
|description=CAGE_peak_2_at_EXTL1_5end | |||
|id=chr1:26348339..26348348,+ | |||
|ontology_enrichment_celltype=CL:0000197!1.91e-08!6;CL:0000098!1.91e-08!6;CL:0002167!1.91e-08!6;CL:0002620!4.10e-07!23 | |||
|ontology_enrichment_celltype_v019=CL:0000632;9.45e-18;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000632,1.12e-17,3 | |||
|ontology_enrichment_development_v019=UBERON:0003918;7.72e-21;10!UBERON:0007687;7.72e-21;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001893!2.77e-21!34;UBERON:0001869!4.01e-20!32;UBERON:0002791!1.79e-19!33;UBERON:0002780!2.74e-19!41;UBERON:0001890!2.74e-19!41;UBERON:0006240!2.74e-19!41;UBERON:0003080!9.92e-19!42;UBERON:0000956!3.34e-17!25;UBERON:0000203!3.34e-17!25;UBERON:0002619!5.73e-17!22;UBERON:0002020!2.02e-16!34;UBERON:0003528!2.02e-16!34;UBERON:0001950!6.61e-16!20;UBERON:0000955!3.70e-15!69;UBERON:0006238!3.70e-15!69;UBERON:0001049!2.59e-14!57;UBERON:0005068!2.59e-14!57;UBERON:0006241!2.59e-14!57;UBERON:0007135!2.59e-14!57;UBERON:0005743!9.63e-14!86;UBERON:0002616!1.13e-13!59;UBERON:0001017!2.54e-13!82;UBERON:0007023!2.84e-13!115;UBERON:0003056!4.78e-13!61;UBERON:0000073!6.63e-12!94;UBERON:0001016!6.63e-12!94;UBERON:0000349!2.03e-10!5;UBERON:0003075!3.58e-10!86;UBERON:0007284!3.58e-10!86;UBERON:0002346!1.67e-09!90;UBERON:0000153!5.08e-09!129;UBERON:0007811!5.08e-09!129;UBERON:0000033!6.21e-08!123;UBERON:0001876!1.16e-07!2;UBERON:0000341!5.51e-07!2;UBERON:0000475!6.66e-07!365 | |||
|ontology_enrichment_uberon_v019=UBERON:0001876;7.14e-26;2!UBERON:0000349;3.26e-11;5!UBERON:0002113;2.45e-09;24!UBERON:0011143;2.45e-09;24!UBERON:0001871;2.18e-08;6!UBERON:0000489;6.67e-08;29!UBERON:0006554;1.13e-07;30!UBERON:0001008;1.13e-07;30!UBERON:0005172;2.99e-07;52!UBERON:0005173;2.99e-07;52!UBERON:0002417;7.96e-07;58!UBERON:0000916;7.96e-07;58!UBERON:0002420;8.37e-07;9!UBERON:0007245;8.37e-07;9!UBERON:0010009;8.37e-07;9!UBERON:0010011;8.37e-07;9!UBERON:0000454;8.37e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001876,5.56e-26,2;UBERON:0000349,2.94e-11,5;UBERON:0005172,3.82e-09,54;UBERON:0005173,3.82e-09,54;UBERON:0002113,1.07e-08,26;UBERON:0003918,1.07e-08,26;UBERON:0011143,1.07e-08,26;UBERON:0005095,1.07e-08,26;UBERON:0007687,1.07e-08,26;UBERON:0001871,2.03e-08,6;UBERON:0002417,2.58e-08,60;UBERON:0000916,2.58e-08,60;UBERON:0000489,1.86e-07,31;UBERON:0002420,7.91e-07,9;UBERON:0007245,7.91e-07,9;UBERON:0010009,7.91e-07,9;UBERON:0010011,7.91e-07,9;UBERON:0000454,7.91e-07,9 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.651083453856419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0.12663051166458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0.103052529238439,0.257640540045629,0.37223371266318,0.168776332241266,0.487185025805993,0,0,0,0.710019185033229,0.10075209822764,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47008711385542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205654985406647,0.901029173531752,0,0,0,0,0.258543431515556,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.623912584592421,0.178428988797162,0.157702415033935,0.468565659970853,0.300946099727719,0,0,0,0.368738337083406,0,0,0,0,0,0,0,0,0,0.248107807818777,0,0.280660094433074,0,0,0.321707842287215,0,0.154209693802656,0,0.0821271560138091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.31154620495167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9882952955326,0.422008249231538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.969332746095218,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438770794307945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202203398942031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316553979779393,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0674035438541849,0,0,0,0.136203406111576,0,0,0,0,0,0.425246896606173,0,0,0,0,0,0,0,0,1.5256112259285,0,0,0,0,0,0.681552087141687,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0,0,0.138348634936231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159296767163702,0,0,0,0,0.521745061811734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449604575675217,0,0,0.82046545696302,0,0.553258019713743,0.322951291263702,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0.135075169236789,0.781078098613847,0,0.0634158101939068,0,0,0,0,0,0,0.336283722218824,0,0,0,0,0,0.203909198930495,0.657727735628491,0,0,0,0,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0.0939839179798536,0.0644578879735772,0,0,0,0,0,0,0,0,0.271965960763659,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0.23806443146374,0,0,0,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p2@EXTL1 | |||
}} |
Latest revision as of 04:34, 17 September 2015
Short description: | p2@EXTL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_EXTL1_5end |
Coexpression cluster: | NA |
Association with transcript: | 68bp_to_ENST00000374280, NM_004455, uc001blf.2_5end |
EntrezGene: | EXTL1 |
HGNC: | 3515 |
UniProt: | Q92935 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatic stellate cell | 1.12e-17 | 3 |
Ontology term | p-value | n |
---|---|---|
amygdala | 5.56e-26 | 2 |
limbic system | 2.94e-11 | 5 |
abdomen element | 3.82e-09 | 54 |
abdominal segment element | 3.82e-09 | 54 |
kidney | 1.07e-08 | 26 |
kidney mesenchyme | 1.07e-08 | 26 |
upper urinary tract | 1.07e-08 | 26 |
kidney rudiment | 1.07e-08 | 26 |
kidney field | 1.07e-08 | 26 |
temporal lobe | 2.03e-08 | 6 |
abdominal segment of trunk | 2.58e-08 | 60 |
abdomen | 2.58e-08 | 60 |
cavitated compound organ | 1.86e-07 | 31 |
basal ganglion | 7.91e-07 | 9 |
nuclear complex of neuraxis | 7.91e-07 | 9 |
aggregate regional part of brain | 7.91e-07 | 9 |
collection of basal ganglia | 7.91e-07 | 9 |
cerebral subcortex | 7.91e-07 | 9 |