FFCP PHASE1:Hg19::chr7:150675342..150675363,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3757 | |EntrezGene=3757 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6251 | |HGNC=6251 | ||
|TSSclassifier=strong | |||
|UniProt=Q12809,Q15BH2 | |UniProt=Q12809,Q15BH2 | ||
|association_with_transcript=38bp_to_NM_000238,NM_172056_5end | |association_with_transcript=38bp_to_NM_000238,NM_172056_5end | ||
|cluster_id=chr7:150675342..150675363,- | |||
|coexpression_cluster_id=C94 | |||
|description=CAGE_peak_4_at_KCNH2_5end | |description=CAGE_peak_4_at_KCNH2_5end | ||
|id=chr7:150675342..150675363,- | |id=chr7:150675342..150675363,- | ||
|ontology_enrichment_celltype=CL:0002322!9.39e-07!5 | |ontology_enrichment_celltype=CL:0002322!9.39e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:0000123;6.56e-12;2!CL:0000242;6.56e-12;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,5.16e-12,2 | |||
|ontology_enrichment_development_v019=UBERON:0003056;8.18e-08;3!UBERON:0010226;7.76e-07;1!UBERON:0004140;7.76e-07;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:114;6.06e-12;2!DOID:169;3.34e-08;6 | |||
|ontology_enrichment_disease_v019_2=DOID:114,5.45e-12,2;DOID:169,3.35e-08,6;DOID:0050619,9.67e-07,1;DOID:1357,9.67e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!4.64e-27!115;UBERON:0000073!2.44e-26!94;UBERON:0001016!2.44e-26!94;UBERON:0001017!1.02e-25!82;UBERON:0005743!3.36e-25!86;UBERON:0001049!2.29e-23!57;UBERON:0005068!2.29e-23!57;UBERON:0006241!2.29e-23!57;UBERON:0007135!2.29e-23!57;UBERON:0000955!3.31e-20!69;UBERON:0006238!3.31e-20!69;UBERON:0003075!5.88e-20!86;UBERON:0007284!5.88e-20!86;UBERON:0002346!2.18e-19!90;UBERON:0002616!2.56e-19!59;UBERON:0002780!7.57e-19!41;UBERON:0001890!7.57e-19!41;UBERON:0006240!7.57e-19!41;UBERON:0003080!3.46e-18!42;UBERON:0002020!2.11e-15!34;UBERON:0003528!2.11e-15!34;UBERON:0001893!3.85e-15!34;UBERON:0002791!2.67e-14!33;UBERON:0004121!1.15e-13!169;UBERON:0001869!1.45e-13!32;UBERON:0000924!1.51e-13!173;UBERON:0006601!1.51e-13!173;UBERON:0003056!4.79e-13!61;UBERON:0000956!1.21e-10!25;UBERON:0000203!1.21e-10!25;UBERON:0002619!6.55e-10!22;UBERON:0001950!8.01e-10!20;UBERON:0000033!1.32e-09!123;UBERON:0000153!1.30e-08!129;UBERON:0007811!1.30e-08!129 | |ontology_enrichment_uberon=UBERON:0007023!4.64e-27!115;UBERON:0000073!2.44e-26!94;UBERON:0001016!2.44e-26!94;UBERON:0001017!1.02e-25!82;UBERON:0005743!3.36e-25!86;UBERON:0001049!2.29e-23!57;UBERON:0005068!2.29e-23!57;UBERON:0006241!2.29e-23!57;UBERON:0007135!2.29e-23!57;UBERON:0000955!3.31e-20!69;UBERON:0006238!3.31e-20!69;UBERON:0003075!5.88e-20!86;UBERON:0007284!5.88e-20!86;UBERON:0002346!2.18e-19!90;UBERON:0002616!2.56e-19!59;UBERON:0002780!7.57e-19!41;UBERON:0001890!7.57e-19!41;UBERON:0006240!7.57e-19!41;UBERON:0003080!3.46e-18!42;UBERON:0002020!2.11e-15!34;UBERON:0003528!2.11e-15!34;UBERON:0001893!3.85e-15!34;UBERON:0002791!2.67e-14!33;UBERON:0004121!1.15e-13!169;UBERON:0001869!1.45e-13!32;UBERON:0000924!1.51e-13!173;UBERON:0006601!1.51e-13!173;UBERON:0003056!4.79e-13!61;UBERON:0000956!1.21e-10!25;UBERON:0000203!1.21e-10!25;UBERON:0002619!6.55e-10!22;UBERON:0001950!8.01e-10!20;UBERON:0000033!1.32e-09!123;UBERON:0000153!1.30e-08!129;UBERON:0007811!1.30e-08!129 | ||
|ontology_enrichment_uberon_v019=UBERON:0003296;8.05e-12;4!UBERON:0010133;8.05e-12;4!UBERON:0000007;5.79e-11;2!UBERON:0007100;1.64e-09;25!UBERON:0004151;6.21e-08;3!UBERON:0001894;5.92e-07;7!UBERON:0002084;7.76e-07;1!UBERON:0002082;7.76e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003296,5.96e-12,4;UBERON:0010133,5.96e-12,4;UBERON:0000007,4.72e-11,2;UBERON:0007100,9.99e-09,27;UBERON:0004151,6.00e-08,3;UBERON:0001894,5.01e-07,7;UBERON:0006222,5.01e-07,7;UBERON:0007023,5.76e-07,114;UBERON:0002084,7.77e-07,1;UBERON:0002082,7.77e-07,1;UBERON:0010226,7.77e-07,1;UBERON:0001764,9.67e-07,1;UBERON:0001825,9.67e-07,1 | |||
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|short_description=p4@KCNH2 | |short_description=p4@KCNH2 | ||
}} | }} |
Latest revision as of 04:40, 17 September 2015
Short description: | p4@KCNH2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_KCNH2_5end |
Coexpression cluster: | C94_smallcell_adrenal_lung_nonsmall_small_somatostatinoma_teratocarcinoma |
Association with transcript: | 38bp_to_NM_000238, NM_172056_5end |
EntrezGene: | KCNH2 |
HGNC: | 6251 |
UniProt: | Q12809Q15BH2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 5.16e-12 | 2 |
Ontology term | p-value | n |
---|---|---|
gland of diencephalon | 5.96e-12 | 4 |
neuroendocrine gland | 5.96e-12 | 4 |
pituitary gland | 4.72e-11 | 2 |
primary circulatory organ | 9.99e-09 | 27 |
cardiac chamber | 6.00e-08 | 3 |
diencephalon | 5.01e-07 | 7 |
future diencephalon | 5.01e-07 | 7 |
adult organism | 5.76e-07 | 114 |
heart left ventricle | 7.77e-07 | 1 |
cardiac ventricle | 7.77e-07 | 1 |
future cardiac ventricle | 7.77e-07 | 1 |
maxillary sinus | 9.67e-07 | 1 |
paranasal sinus | 9.67e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
heart disease | 5.45e-12 | 2 |
neuroendocrine tumor | 3.35e-08 | 6 |
paranasal sinus cancer | 9.67e-07 | 1 |
maxillary sinus cancer | 9.67e-07 | 1 |