FFCP PHASE1:Hg19::chr10:135043674..135043682,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8433 | |EntrezGene=8433 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12634 | |HGNC=12634 | ||
|TSSclassifier=strong | |||
|UniProt=Q5T230 | |UniProt=Q5T230 | ||
|association_with_transcript=-95bp_to_ENST00000304477,NM_003577,uc001lmc.2_5end | |association_with_transcript=-95bp_to_ENST00000304477,NM_003577,uc001lmc.2_5end | ||
|cluster_id=chr10:135043674..135043682,+ | |||
|coexpression_cluster_id=C157 | |||
|description=CAGE_peak_9_at_UTF1_5end | |description=CAGE_peak_9_at_UTF1_5end | ||
|id=chr10:135043674..135043682,+ | |id=chr10:135043674..135043682,+ | ||
|ontology_enrichment_celltype=CL:0002322!3.57e-37!5;CL:0000039!3.42e-17!7;CL:0000586!3.42e-17!7;CL:0000540!1.74e-11!6;CL:0000031!1.74e-11!6;CL:0000404!1.74e-11!6;CL:0000047!9.77e-09!8;CL:0000148!2.99e-07!10;CL:0000541!2.99e-07!10 | |ontology_enrichment_celltype=CL:0002322!3.57e-37!5;CL:0000039!3.42e-17!7;CL:0000586!3.42e-17!7;CL:0000540!1.74e-11!6;CL:0000031!1.74e-11!6;CL:0000404!1.74e-11!6;CL:0000047!9.77e-09!8;CL:0000148!2.99e-07!10;CL:0000541!2.99e-07!10 | ||
|ontology_enrichment_celltype_v019=CL:0002322;2.70e-82;5!CL:0002321;1.21e-27;15!CL:0000039;4.12e-22;7!CL:0000586;4.12e-22;7!CL:0000148;1.42e-15;10!CL:0000540;6.70e-12;6!CL:0000404;6.70e-12;6!CL:0000147;2.62e-11;14!CL:0000710;4.35e-08;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,1.77e-82,5;CL:0000039,4.59e-22,7;CL:0000586,4.59e-22,7;CL:0000148,1.36e-15,10;CL:0000541,1.36e-15,10;CL:0000540,7.08e-12,6;CL:0000031,7.08e-12,6;CL:0000404,7.08e-12,6;CL:0000147,2.53e-11,14;CL:0000047,3.86e-09,8;CL:0000710,4.25e-08,20;CL:0000133,8.40e-07,59 | |||
|ontology_enrichment_development_v019=UBERON:0009117;7.01e-27;10!UBERON:0005564;7.01e-27;10!CL:0000031;6.70e-12;6 | |||
|ontology_enrichment_disease=DOID:3095!2.00e-11!22;DOID:2994!2.00e-11!22;DOID:3371!2.29e-08!1;DOID:4549!2.29e-08!1;DOID:5861!2.29e-08!1;DOID:6496!2.29e-08!1;DOID:225!3.79e-08!1 | |ontology_enrichment_disease=DOID:3095!2.00e-11!22;DOID:2994!2.00e-11!22;DOID:3371!2.29e-08!1;DOID:4549!2.29e-08!1;DOID:5861!2.29e-08!1;DOID:6496!2.29e-08!1;DOID:225!3.79e-08!1 | ||
|ontology_enrichment_disease_v019=DOID:3095;1.87e-07;22!DOID:2994;1.87e-07;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,1.94e-07,22;DOID:2994,1.94e-07,22 | |||
|ontology_enrichment_uberon=UBERON:0000473!1.47e-32!8;UBERON:0003135!1.44e-23!11;UBERON:0000991!6.51e-21!21;UBERON:0009196!6.51e-21!21;UBERON:0009117!6.51e-21!21;UBERON:0005564!6.51e-21!21;UBERON:0004176!6.50e-20!22;UBERON:0003101!1.54e-11!22;UBERON:0000079!1.54e-11!22;UBERON:0002323!3.09e-11!46;UBERON:0004458!1.83e-10!49;UBERON:0003133!1.58e-08!48;UBERON:0003886!7.82e-08!63;UBERON:0002553!6.50e-07!70;UBERON:0005156!9.86e-07!59;UBERON:0000990!9.86e-07!59 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;1.79e-33;8!UBERON:0003135;1.76e-24;11!UBERON:0000922;6.76e-14;49!UBERON:0000991;5.18e-13;21!UBERON:0003101;1.95e-12;22!UBERON:0000079;1.95e-12;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,2.61e-33,8;UBERON:0003135,2.31e-24,11;UBERON:0000991,5.96e-13,21;UBERON:0009196,5.96e-13,21;UBERON:0009117,5.96e-13,21;UBERON:0005564,5.96e-13,21;UBERON:0004176,2.23e-12,22;UBERON:0003101,2.23e-12,22;UBERON:0000079,2.23e-12,22 | |||
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|short_description=p9@UTF1 | |short_description=p9@UTF1 | ||
}} | }} |
Latest revision as of 04:43, 17 September 2015
Short description: | p9@UTF1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_UTF1_5end |
Coexpression cluster: | C157_testicular_H9_testis_iPS_teratocarcinoma_colon_trachea |
Association with transcript: | -95bp_to_ENST00000304477, NM_003577, uc001lmc.2_5end |
EntrezGene: | UTF1 |
HGNC: | 12634 |
UniProt: | Q5T230 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 1.77e-82 | 5 |
germ line cell | 4.59e-22 | 7 |
germ cell | 4.59e-22 | 7 |
melanocyte | 1.36e-15 | 10 |
melanoblast | 1.36e-15 | 10 |
neuron | 7.08e-12 | 6 |
neuroblast | 7.08e-12 | 6 |
electrically signaling cell | 7.08e-12 | 6 |
pigment cell | 2.53e-11 | 14 |
neuronal stem cell | 3.86e-09 | 8 |
neurecto-epithelial cell | 4.25e-08 | 20 |
neurectodermal cell | 8.40e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
testis | 2.61e-33 | 8 |
male reproductive organ | 2.31e-24 | 11 |
gonad | 5.96e-13 | 21 |
indifferent external genitalia | 5.96e-13 | 21 |
indifferent gonad | 5.96e-13 | 21 |
gonad primordium | 5.96e-13 | 21 |
external genitalia | 2.23e-12 | 22 |
male organism | 2.23e-12 | 22 |
male reproductive system | 2.23e-12 | 22 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 1.94e-07 | 22 |
germ cell cancer | 1.94e-07 | 22 |