FFCP PHASE1:Hg19::chr10:135122346..135122393,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr10:135122346..135122393,- to FFCP PHASE1:Hg19::chr10:135122346..135122393,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10844 | |EntrezGene=10844 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18599 | |HGNC=18599 | ||
|TSSclassifier=strong | |||
|UniProt=F5H4E0 | |UniProt=F5H4E0 | ||
|association_with_transcript=0bp_to_ENST00000417178,ENST00000480198,ENST00000487796_5end | |||
|cluster_id=chr10:135122346..135122393,- | |||
|description=CAGE_peak_1_at_TUBGCP2_5end | |||
|id=chr10:135122346..135122393,- | |||
|ontology_enrichment_celltype=CL:0000055!4.82e-10!180;CL:0000057!1.19e-07!75;CL:0000183!1.76e-07!59 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.18e-07,76 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000119!7.19e-10!312;UBERON:0000483!2.08e-09!309;UBERON:0000914!4.11e-09!83;UBERON:0002329!4.11e-09!83;UBERON:0003077!4.11e-09!83;UBERON:0003059!4.11e-09!83;UBERON:0007282!4.11e-09!83;UBERON:0009618!4.11e-09!83;UBERON:0007285!4.11e-09!83;UBERON:0000025!8.61e-09!194;UBERON:0004290!3.23e-08!70;UBERON:0000481!4.41e-08!347;UBERON:0000475!1.49e-07!365;UBERON:0001637!1.92e-07!42;UBERON:0003509!1.92e-07!42;UBERON:0004572!1.92e-07!42;UBERON:0000486!3.30e-07!82 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000119,5.33e-10,309;UBERON:0000483,1.55e-09,306;UBERON:0007503,2.11e-09,78;UBERON:0010314,3.22e-09,132;UBERON:0000025,4.05e-09,192;UBERON:0007524,4.63e-08,73;UBERON:0003077,5.65e-08,72;UBERON:0007285,5.65e-08,72;UBERON:0002329,1.11e-07,71;UBERON:0003059,1.11e-07,71;UBERON:0007282,1.11e-07,71;UBERON:0004290,1.11e-07,71;UBERON:0009618,1.11e-07,71;UBERON:0001637,1.92e-07,42;UBERON:0003509,1.92e-07,42;UBERON:0004572,1.92e-07,42;UBERON:0000479,4.53e-07,773;UBERON:0000486,9.30e-07,83 | |||
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| ||
|short_description=p1@TUBGCP2 | |||
}} | }} |
Latest revision as of 05:25, 17 September 2015
Short description: | p1@TUBGCP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TUBGCP2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000417178, ENST00000480198, ENST00000487796_5end |
EntrezGene: | TUBGCP2 |
HGNC: | 18599 |
UniProt: | F5H4E0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.18e-07 | 76 |
Ontology term | p-value | n |
---|---|---|
cell layer | 5.33e-10 | 309 |
epithelium | 1.55e-09 | 306 |
epithelial vesicle | 2.11e-09 | 78 |
structure with developmental contribution from neural crest | 3.22e-09 | 132 |
tube | 4.05e-09 | 192 |
dense mesenchyme tissue | 4.63e-08 | 73 |
paraxial mesoderm | 5.65e-08 | 72 |
presumptive paraxial mesoderm | 5.65e-08 | 72 |
somite | 1.11e-07 | 71 |
presomitic mesoderm | 1.11e-07 | 71 |
presumptive segmental plate | 1.11e-07 | 71 |
dermomyotome | 1.11e-07 | 71 |
trunk paraxial mesoderm | 1.11e-07 | 71 |
artery | 1.92e-07 | 42 |
arterial blood vessel | 1.92e-07 | 42 |
arterial system | 1.92e-07 | 42 |
tissue | 4.53e-07 | 773 |
multilaminar epithelium | 9.30e-07 | 83 |