FFCP PHASE1:Hg19::chr6:24667082..24667140,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51567 | |EntrezGene=51567 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17768 | |HGNC=17768 | ||
|TSSclassifier=strong | |||
|UniProt=F5H3E4,O95551 | |UniProt=F5H3E4,O95551 | ||
|association_with_transcript=0bp_to_ENST00000545780,NM_016614,uc003nej.2,uc010jpu.1_5end | |association_with_transcript=0bp_to_ENST00000545780,NM_016614,uc003nej.2,uc010jpu.1_5end | ||
|cluster_id=chr6:24667082..24667140,- | |||
|description=CAGE_peak_1_at_TDP2_5end | |description=CAGE_peak_1_at_TDP2_5end | ||
|id=chr6:24667082..24667140,- | |id=chr6:24667082..24667140,- | ||
|ontology_enrichment_celltype=CL:0000738!8.41e-16!140;CL:0002032!1.57e-14!165;CL:0000837!1.57e-14!165;CL:0002087!7.21e-14!119;CL:0000037!1.63e-13!172;CL:0000566!1.63e-13!172;CL:0002031!2.95e-13!124;CL:0000766!3.26e-13!76;CL:0002194!1.06e-10!63;CL:0000576!1.06e-10!63;CL:0000040!1.06e-10!63;CL:0000559!1.06e-10!63;CL:0000839!1.97e-10!70;CL:0000763!2.83e-10!112;CL:0000049!2.83e-10!112;CL:0000988!3.04e-10!182;CL:0000557!4.08e-10!71;CL:0002009!1.89e-09!65;CL:0000860!1.35e-07!45;CL:0002057!7.31e-07!42 | |ontology_enrichment_celltype=CL:0000738!8.41e-16!140;CL:0002032!1.57e-14!165;CL:0000837!1.57e-14!165;CL:0002087!7.21e-14!119;CL:0000037!1.63e-13!172;CL:0000566!1.63e-13!172;CL:0002031!2.95e-13!124;CL:0000766!3.26e-13!76;CL:0002194!1.06e-10!63;CL:0000576!1.06e-10!63;CL:0000040!1.06e-10!63;CL:0000559!1.06e-10!63;CL:0000839!1.97e-10!70;CL:0000763!2.83e-10!112;CL:0000049!2.83e-10!112;CL:0000988!3.04e-10!182;CL:0000557!4.08e-10!71;CL:0002009!1.89e-09!65;CL:0000860!1.35e-07!45;CL:0002057!7.31e-07!42 | ||
|ontology_enrichment_celltype_v019=CL:0000473;6.04e-10;39!CL:0000234;6.04e-10;39!CL:0000860;2.40e-09;33!CL:0002057;2.40e-09;33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,3.02e-15,136;CL:0002032,5.54e-14,161;CL:0000837,5.54e-14,161;CL:0002087,2.46e-13,115;CL:0000037,5.59e-13,168;CL:0002031,9.97e-13,120;CL:0000766,1.02e-12,72;CL:0002194,3.20e-10,59;CL:0000576,3.20e-10,59;CL:0000040,3.20e-10,59;CL:0000559,3.20e-10,59;CL:0000988,3.77e-10,177;CL:0000839,6.07e-10,66;CL:0000763,8.88e-10,108;CL:0000049,8.88e-10,108;CL:0000557,1.26e-09,67;CL:0000473,3.56e-09,48;CL:0000234,3.56e-09,48;CL:0002009,5.78e-09,61;CL:0000860,7.31e-07,42;CL:0002057,7.31e-07,42 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!6.79e-11!115;UBERON:0002390!1.66e-10!102;UBERON:0003061!1.66e-10!102;UBERON:0004765!3.09e-08!101;UBERON:0001434!3.09e-08!101;UBERON:0002371!4.70e-08!80;UBERON:0002193!4.96e-08!112;UBERON:0001474!5.05e-08!86 | |ontology_enrichment_uberon=UBERON:0007023!6.79e-11!115;UBERON:0002390!1.66e-10!102;UBERON:0003061!1.66e-10!102;UBERON:0004765!3.09e-08!101;UBERON:0001434!3.09e-08!101;UBERON:0002371!4.70e-08!80;UBERON:0002193!4.96e-08!112;UBERON:0001474!5.05e-08!86 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.49e-10,114;UBERON:0002390,5.25e-10,98;UBERON:0003061,5.25e-10,98;UBERON:0001434,1.06e-07,100;UBERON:0002371,1.40e-07,76;UBERON:0002193,1.43e-07,108;UBERON:0001474,1.50e-07,82;UBERON:0004765,4.91e-07,90 | |||
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| ||
|short_description=p1@TDP2 | |short_description=p1@TDP2 | ||
}} | }} |
Latest revision as of 06:21, 17 September 2015
Short description: | p1@TDP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TDP2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000545780, NM_016614, uc003nej.2, uc010jpu.1_5end |
EntrezGene: | TDP2 |
HGNC: | 17768 |
UniProt: | F5H3E4O95551 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 3.02e-15 | 136 |
hematopoietic oligopotent progenitor cell | 5.54e-14 | 161 |
hematopoietic multipotent progenitor cell | 5.54e-14 | 161 |
nongranular leukocyte | 2.46e-13 | 115 |
hematopoietic stem cell | 5.59e-13 | 168 |
hematopoietic lineage restricted progenitor cell | 9.97e-13 | 120 |
myeloid leukocyte | 1.02e-12 | 72 |
monopoietic cell | 3.20e-10 | 59 |
monocyte | 3.20e-10 | 59 |
monoblast | 3.20e-10 | 59 |
promonocyte | 3.20e-10 | 59 |
hematopoietic cell | 3.77e-10 | 177 |
myeloid lineage restricted progenitor cell | 6.07e-10 | 66 |
myeloid cell | 8.88e-10 | 108 |
common myeloid progenitor | 8.88e-10 | 108 |
granulocyte monocyte progenitor cell | 1.26e-09 | 67 |
defensive cell | 3.56e-09 | 48 |
phagocyte | 3.56e-09 | 48 |
macrophage dendritic cell progenitor | 5.78e-09 | 61 |
classical monocyte | 7.31e-07 | 42 |
CD14-positive, CD16-negative classical monocyte | 7.31e-07 | 42 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.49e-10 | 114 |
hematopoietic system | 5.25e-10 | 98 |
blood island | 5.25e-10 | 98 |
skeletal system | 1.06e-07 | 100 |
bone marrow | 1.40e-07 | 76 |
hemolymphoid system | 1.43e-07 | 108 |
bone element | 1.50e-07 | 82 |
skeletal element | 4.91e-07 | 90 |