FFCP PHASE1:Hg19::chr11:2017438..2017454,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=4713 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-17bp_to_ENST00000442037_5end | |||
|cluster_id=chr11:2017438..2017454,- | |||
|description=CAGE_peak_29_at_H19_5end | |||
|id=chr11:2017438..2017454,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000349;1.17e-21;19!CL:0002577;4.15e-09;3!CL:0002541;2.97e-08;3!CL:0002536;6.29e-07;2!CL:0002575;8.96e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,1.09e-21,19;CL:0002577,3.99e-09,3;CL:0002541,3.10e-08,3;CL:0002536,6.12e-07,2;CL:0002575,8.85e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0008947;5.14e-12;29 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001557!5.11e-16!19;UBERON:0001737!5.93e-15!9;UBERON:0005631!3.06e-14!14;UBERON:0000158!3.06e-14!14;UBERON:0000478!2.13e-11!24;UBERON:0003104!2.25e-11!238;UBERON:0009142!2.25e-11!238;UBERON:0000077!1.27e-10!130;UBERON:0003124!2.43e-10!7;UBERON:0004921!1.54e-09!129;UBERON:0004185!1.54e-09!129;UBERON:0001041!1.98e-09!98;UBERON:0007023!1.06e-08!115;UBERON:0004923!1.09e-08!57;UBERON:0004119!1.91e-08!169;UBERON:0000925!1.91e-08!169;UBERON:0006595!1.91e-08!169;UBERON:0001007!7.57e-08!155;UBERON:0001555!7.57e-08!155;UBERON:0007026!7.57e-08!155;UBERON:0000065!8.03e-08!53;UBERON:0000926!1.18e-07!448;UBERON:0004120!1.18e-07!448;UBERON:0006603!1.18e-07!448;UBERON:0000481!1.77e-07!347;UBERON:0003103!2.76e-07!69;UBERON:0000072!5.21e-07!46;UBERON:0001987!8.24e-07!4;UBERON:0004340!8.24e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;1.98e-26;9!UBERON:0001557;1.98e-26;9!UBERON:0000478;3.31e-22;24!UBERON:0005631;1.37e-16;10!UBERON:0000158;1.37e-16;10!UBERON:0001987;3.58e-11;4!UBERON:0000305;2.69e-10;7!UBERON:0001723;2.56e-09;3!UBERON:0001033;2.56e-09;3!UBERON:0004151;1.36e-08;3!UBERON:0003124;2.97e-08;3!UBERON:0000920;2.97e-08;3!UBERON:0001134;6.02e-07;16!UBERON:0002036;6.02e-07;16!UBERON:0007100;6.32e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,2.08e-26,9;UBERON:0005631,6.95e-26,14;UBERON:0000158,6.95e-26,14;UBERON:0001557,9.90e-24,19;UBERON:0000478,2.68e-22,24;UBERON:0003124,7.79e-18,7;UBERON:0001987,2.64e-11,4;UBERON:0004340,2.64e-11,4;UBERON:0000305,2.78e-10,7;UBERON:0001041,8.05e-10,87;UBERON:0000065,9.54e-10,54;UBERON:0001723,2.30e-09,3;UBERON:0001033,2.30e-09,3;UBERON:0010056,2.30e-09,3;UBERON:0004871,6.13e-09,8;UBERON:0000072,6.70e-09,47;UBERON:0004151,1.27e-08,3;UBERON:0004923,1.35e-08,66;UBERON:0008947,1.94e-08,38;UBERON:0003258,1.94e-08,38;UBERON:0000920,3.10e-08,3;UBERON:0003103,3.90e-08,68;UBERON:0004921,3.52e-07,118;UBERON:0001004,5.94e-07,74 | |||
|phase1_expression=0,0.214100523890983,0.140954404095971,0,0.446961094427288,3.48935409640147,0,0,0.261185628199839,0,0,7.8638893966862,5.53910654279752,0.123766352960047,0.331397375727916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.72038491523742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.80338800071154,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.2727928058172,12.1380976856233,11.0865073746402,14.007334537014,11.7654899809899,12.338072193777,14.5617812812978,14.5203884192756,11.9271618653381,0,2.80483547606892,0.4115740113314,1.47008711385542,0,0,0.590789906681404,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224262168690721,0,0,0,0,0,0,0,0,0,0,0.714889968290738,5.96883765930587,0,0,0,1.58390374586686,0,0,0,0,0,0,0,0,0,1.15825045334063,0.61642896765115,3.76028022803781,0,0,0,0,0,0,0,0,0,0,0,0,0.24538298343828,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0,4.30762546418029,5.83343820478455,0,0,0,1.5156378572313,14.9791895559447,5.44302527993425,2.23297027036899,0,0.280660094433074,1.02511319404561,0.511707249066704,0.160853921143607,2.96836132889982,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0.784349769176855,0,0,0,0.170093705276516,0,4.62681758070868,0,1.00337954770971,0,0,0,0,0,0,0,0,0.412164046590889,0,0,0,0,0,0.676695028044854,0.308097234229289,0.15350367472613,0.137836572484531,0,0.290033387828457,0.255679882248303,4.09547363974992,0,0,0,0,0,0,0,0,0,0,0,0,0,0.632758849437452,0,0,0,0,0,0,0,0,0,0,0,1.46290121726877,0,0,0,0,0,0,0,0,0,0.655894752046633,0,0,0,0,0.785992328104969,0,0,0,0,0,0,0,0,0,0.659006605437454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.54175355742871,0,0,0,3.10367830158997,5.64232893582013,6.14321404198464,0,0,0,0,0,0.796991953004279,0.276283915531148,2.01546198283421,0,0,0,0,0,0,1.38100767891707,0,0,0,0,0,0,0,4.34999745260876,0,0,0.472775363535873,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0.179515288819544,0.434589487688032,1.5950057986596,1.19076871422421,3.73124343213044,0,0,0,0,0.19606253431774,0,0,0,0,0,0,0,0,0.973033209536731,0,0,0,0,0,1.60515529459758,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.969890164884194,0,2.03382666702479,0,0,0,0,0,0.426905989478705,5.39485945871752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.95497680890578,0.687481272035051,2.15361907373044,3.59422200898184,5.15071257763885,2.67805748930247,1.74677028465488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.57611414598396,2.7276385830199,0,0,0,2.85878130549347,2.64836788146173,0,0,0,0,0,0.082092520749339,0,0,0.293104467356165,0,0,0,0,0,1.06787412567695,7.23139803458463,0.414239055347196,0,0,0,0,1.63205341010842,0.7520696820681,0.919036730290385,0.983617892129413,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398095888698616,3.60024988196838,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622077260032973,0,1.29389773676018,0,0.109209638192014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183428598521679,4.38997531371285,0,0,0,0.300841313397029,0,0,0.523813388962845,0,3.10497781055795,0,0,0,0,0,0,0.992422356778588,0,0,0,0,0,0,1.86274977341542,0,0.685952037749674,0,0,0,0,0,0,0.560544326627578,1.82631744101899,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,1.3746412112643,0,0,0,0,0,1.94228651156368,2.46390736454993,1.1598144313382,1.45713297917742,0,0,0,0,0,0,0.154348316215889,0.437119121007915,0,0.980593287015622,1.17838273550813,0,0,0.4226557275834,0.169927114687817,0.469919589899268,1.35361564744512,0,0,0,0,0.730336388246517,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0.227336094654718,0.267964130156178,0,0,1.91910583710883,0.714193294391221,0.129177819672012,0.558672428662721,0,0.0636471582781649,0.404234377916439,3.9189014621453,10.6092323336437,2.08791364345221,0.573777643141411,2.32862249582209,0,0,0,0,7.03922827210363,0,1.62758471326295,0.665756774185513,0.603821380773079,0 | |||
|short_description=p29@H19 | |||
}} |
Latest revision as of 06:31, 17 September 2015
Short description: | p29@H19 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_29_at_H19_5end |
Coexpression cluster: | NA |
Association with transcript: | -17bp_to_ENST00000442037_5end |
EntrezGene: | NA |
HGNC: | 4713 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 1.09e-21 | 19 |
placental epithelial cell | 3.99e-09 | 3 |
chorionic membrane mesenchymal stem cell | 3.10e-08 | 3 |
amniotic epithelial cell | 6.12e-07 | 2 |
central nervous system pericyte | 8.85e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
larynx | 2.08e-26 | 9 |
extraembryonic membrane | 6.95e-26 | 14 |
membranous layer | 6.95e-26 | 14 |
upper respiratory tract | 9.90e-24 | 19 |
extraembryonic structure | 2.68e-22 | 24 |
chorion | 7.79e-18 | 7 |
placenta | 2.64e-11 | 4 |
allantois | 2.64e-11 | 4 |
amnion | 2.78e-10 | 7 |
foregut | 8.05e-10 | 87 |
respiratory tract | 9.54e-10 | 54 |
tongue | 2.30e-09 | 3 |
gustatory system | 2.30e-09 | 3 |
future tongue | 2.30e-09 | 3 |
somatic layer of lateral plate mesoderm | 6.13e-09 | 8 |
segment of respiratory tract | 6.70e-09 | 47 |
cardiac chamber | 1.27e-08 | 3 |
organ component layer | 1.35e-08 | 66 |
respiratory primordium | 1.94e-08 | 38 |
endoderm of foregut | 1.94e-08 | 38 |
egg chorion | 3.10e-08 | 3 |
compound organ | 3.90e-08 | 68 |
subdivision of digestive tract | 3.52e-07 | 118 |
respiratory system | 5.94e-07 | 74 |