FFCP PHASE1:Hg19::chr11:2018694..2018745,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt=Q9UHT2 | |UniProt=Q9UHT2 | ||
|association_with_transcript=209bp_to_AF118081_5end | |association_with_transcript=209bp_to_AF118081_5end | ||
|cluster_id=chr11:2018694..2018745,+ | |||
|coexpression_cluster_id=C227 | |coexpression_cluster_id=C227 | ||
|description=CAGE_peak_3_at_AF118081_5end | |description=CAGE_peak_3_at_AF118081_5end | ||
|id=chr11:2018694..2018745,+ | |id=chr11:2018694..2018745,+ | ||
|ontology_enrichment_celltype=CL:0000188!3.91e-07!9 | |ontology_enrichment_celltype=CL:0000188!3.91e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0000349;4.39e-19;19!CL:0000188;4.23e-09;9!CL:0002577;9.81e-08;3!CL:0002541;6.52e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,4.54e-19,19;CL:0000188,3.91e-09,9;CL:0002577,9.93e-08,3;CL:0002541,7.88e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!3.87e-12!14;UBERON:0000158!3.87e-12!14;UBERON:0001737!1.91e-11!9;UBERON:0000478!1.53e-10!24;UBERON:0001557!3.68e-10!19;UBERON:0000481!1.05e-09!347;UBERON:0003104!1.91e-09!238;UBERON:0009142!1.91e-09!238;UBERON:0003124!2.85e-09!7;UBERON:0004119!1.81e-08!169;UBERON:0000925!1.81e-08!169;UBERON:0006595!1.81e-08!169;UBERON:0002200!5.97e-08!11;UBERON:0006876!5.97e-08!11;UBERON:0000077!7.88e-08!130;UBERON:0004921!4.12e-07!129;UBERON:0004185!4.12e-07!129;UBERON:0000468!5.82e-07!659;UBERON:0001007!6.88e-07!155;UBERON:0001555!6.88e-07!155;UBERON:0007026!6.88e-07!155 | |ontology_enrichment_uberon=UBERON:0005631!3.87e-12!14;UBERON:0000158!3.87e-12!14;UBERON:0001737!1.91e-11!9;UBERON:0000478!1.53e-10!24;UBERON:0001557!3.68e-10!19;UBERON:0000481!1.05e-09!347;UBERON:0003104!1.91e-09!238;UBERON:0009142!1.91e-09!238;UBERON:0003124!2.85e-09!7;UBERON:0004119!1.81e-08!169;UBERON:0000925!1.81e-08!169;UBERON:0006595!1.81e-08!169;UBERON:0002200!5.97e-08!11;UBERON:0006876!5.97e-08!11;UBERON:0000077!7.88e-08!130;UBERON:0004921!4.12e-07!129;UBERON:0004185!4.12e-07!129;UBERON:0000468!5.82e-07!659;UBERON:0001007!6.88e-07!155;UBERON:0001555!6.88e-07!155;UBERON:0007026!6.88e-07!155 | ||
|ontology_enrichment_uberon_v019=UBERON:0001134;2.20e-20;16!UBERON:0002036;2.20e-20;16!UBERON:0000478;5.32e-19;24!UBERON:0001737;2.29e-18;9!UBERON:0001557;2.29e-18;9!UBERON:0005631;8.11e-13;10!UBERON:0000158;8.11e-13;10!UBERON:0001987;1.65e-09;4!UBERON:0002385;1.27e-08;31!UBERON:0001015;1.27e-08;31!UBERON:0000383;1.27e-08;31!UBERON:0000922;4.97e-08;49!UBERON:0000305;7.53e-08;7!UBERON:0001723;2.97e-07;3!UBERON:0001033;2.97e-07;3!UBERON:0003124;6.52e-07;3!UBERON:0000920;6.52e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,2.91e-20,14;UBERON:0000158,2.91e-20,14;UBERON:0000478,5.69e-19,24;UBERON:0001737,2.45e-18,9;UBERON:0001557,5.76e-16,19;UBERON:0003124,1.20e-14,7;UBERON:0001987,1.70e-09,4;UBERON:0004340,1.70e-09,4;UBERON:0003104,2.89e-08,160;UBERON:0009142,2.89e-08,160;UBERON:0000305,7.34e-08,7;UBERON:0001041,1.76e-07,87;UBERON:0004119,1.94e-07,160;UBERON:0000925,1.94e-07,160;UBERON:0006595,1.94e-07,160;UBERON:0000072,2.78e-07,47;UBERON:0001723,3.00e-07,3;UBERON:0001033,3.00e-07,3;UBERON:0010056,3.00e-07,3;UBERON:0001134,7.10e-07,62;UBERON:0002036,7.10e-07,62;UBERON:0003082,7.10e-07,62;UBERON:0000920,7.88e-07,3;UBERON:0004921,8.26e-07,118;UBERON:0004871,8.44e-07,8 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0,0,2.68176656656373,7.85104671690332,0,0,0,0,1.39560233594486,16.3831029097629,20.3100573235909,0.990130823680373,2.98257638155124,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309632246632152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15076305659177,0,0,0,0,1.94653948121054,0.0945348171640679,0.221729397462564,0.087834785693126,0.327447688744282,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,3.36406560085384,0,0,0.311211035399766,0,0.163461903113459,0.302714855289863,21.89468513024,0.70296429550139,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168336113954066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161646056818812,0,0,0,0,0,0,0,0,1.16193942869518,1.0366105501537,0,0,0,0,0,0,0,17.3910996058571,16.1841302474978,14.9426838527759,20.0735030372957,17.2124760833001,16.8462139568879,23.3258163117084,15.5014957449023,20.0068521612123,0.738155454624648,0,1.2347220339942,13.2307840246988,0,0.982827216677626,3.54473944008842,0,0,0.514703430895577,0,0,0,3.98130314181677,0.325808305310325,0,0,0.231860809950154,0,0,0,0,0.790204397959275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42977993658148,58.6031333822758,3.29296134712308,0,3.19852753868291,1.58390374586686,0,0,0,0,0,0,0,0,0,3.4747513600219,4.52047909610843,3.04403637507822,0,0,0,0,0,0,1.54657762555539,0.167516265334349,0.637938751653163,0,0,0,3.43536176813592,3.00102312635806,1.35632511849868,0,0,0,0,0.601892199455438,0,4.1389228517002,0,0,0,14.6850868097055,18.1866014619754,0,0,0,33.3440328590885,44.9375686678342,43.8465925328036,0.248107807818777,0,0.280660094433074,0.640695746278505,0,0.482561763430822,5.93672265779964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215915916102139,1.54227252690289,0,1.00337954770971,0,0,0,0,0,0,0,0,1.95777922130672,0,0.082509499920588,0,0,0,4.35018232314549,1.54048617114644,1.5350367472613,3.30807773962873,0.429680979473094,2.90033387828457,1.10794615640931,17.8954391649942,0,0,0,0.2023155617111,0,0,0,0,0,0,0,0,1.116475108079,0.632758849437452,0.190630193923825,0,11.5543526769159,0,0,0,0.274537029736055,0,0,0,0,1.46290121726877,0,0,0,0,0,0,0,0,0,2.62357900818653,0,0,0,0.143411352204052,3.92996164052485,0,0,0.211107635297664,0.329294892959902,0.75894634753143,0.699869440489966,0,0,0,2.91845782408015,0,1.68471475667626,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228234679033192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0,0,0,37.721628588555,14.8482340416319,56.5175691862587,0,0,0,0,0.211125408127993,0.19924798825107,0,0.755798243562828,0,0,0,0,0,0,0.789147245095469,0,0,0,0.0927680981618513,0,0,0,0,0.1137934482855,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0,0.538651809526579,0,0,3.41079048757134,4.23724750495832,33.8141229315835,1.09917112082235,39.444573425379,0,0,0,0,0,0.167821586975843,0,0,0,0,0,0,0,0.353830258013357,6.11030144933625,0,0,0,0,32.1031058919516,0,0,0,0,0.394584402849391,6.04953580243319,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,1.04836000945218,0,0,0,0,0.290967049465258,0,2.48578814858586,0,0,0,0.391102765469606,0,0.213452994739353,23.5775339306914,0,0,0,0,0.124252535565433,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0.229160424011684,0,0.798716001995964,0.429226048136571,1.56220020209311,2.28423806454869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236417121897595,2.25554728980492,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0.113312091520126,0.439656701034247,45.0523422301552,0,0,0,0,0,0.628817220398664,0.414239055347196,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138348634936231,0.124980407962107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.00027764663154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.345430341731199,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.48830904013189,0,1.50954735955355,0,1.85656384926424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.471878893390961,0.550285795565037,17.4443755887011,0,0,0,0.526472298444801,0,0,24.6192292812537,0,0.443568258651136,0,0,0,0,0,0,2.48105589194647,0,0.255524855279191,0,0,0,0.227662191351298,14.2810815961849,0,0.171488009437418,0,0,0.118193840883968,0,0.470958557103084,0.157115589916002,3.92381028639305,24.6552854537564,0,0.47775168788705,0.571812353413251,0.158013611732727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.58971534875158,6.87840805936855,31.3149896461314,1.45713297917742,0,0,0,0,0,0,0,2.18559560503957,0,0.490296643507811,0.707029641304878,0,0,2.113278637917,0,0,1.99819452718089,0,0.178553938605658,0,0,1.46067277649303,0.458729283404541,0,0.157771562193185,0,0,5.81929524566941,0,1.38652688589425,17.7376890470754,0,0.327796715891087,0.126698501011437,0,0,0,0,0.303114792872958,0,0,0,2.55880778281177,8.80838396415839,0,0.0620747142958579,0,0.0636471582781649,2.82964064541507,8.05551967218757,38.6723630226368,1.01028079521881,0.358611026963382,15.9676971142086,0,0,0,0,14.0784565442073,0.244482888365733,9.358612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| ||
|short_description=p3@AF118081 | |short_description=p3@AF118081 | ||
}} | }} |
Latest revision as of 06:53, 17 September 2015
Short description: | p3@AF118081 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_AF118081_5end |
Coexpression cluster: | C227_chorionic_amniotic_Mesenchymal_Placental_gastric_diaphragm_tongue |
Association with transcript: | 209bp_to_AF118081_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 4.54e-19 | 19 |
cell of skeletal muscle | 3.91e-09 | 9 |
placental epithelial cell | 9.93e-08 | 3 |
chorionic membrane mesenchymal stem cell | 7.88e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 2.91e-20 | 14 |
membranous layer | 2.91e-20 | 14 |
extraembryonic structure | 5.69e-19 | 24 |
larynx | 2.45e-18 | 9 |
upper respiratory tract | 5.76e-16 | 19 |
chorion | 1.20e-14 | 7 |
placenta | 1.70e-09 | 4 |
allantois | 1.70e-09 | 4 |
mesenchyme | 2.89e-08 | 160 |
entire embryonic mesenchyme | 2.89e-08 | 160 |
amnion | 7.34e-08 | 7 |
foregut | 1.76e-07 | 87 |
endoderm-derived structure | 1.94e-07 | 160 |
endoderm | 1.94e-07 | 160 |
presumptive endoderm | 1.94e-07 | 160 |
segment of respiratory tract | 2.78e-07 | 47 |
tongue | 3.00e-07 | 3 |
gustatory system | 3.00e-07 | 3 |
future tongue | 3.00e-07 | 3 |
skeletal muscle tissue | 7.10e-07 | 62 |
striated muscle tissue | 7.10e-07 | 62 |
myotome | 7.10e-07 | 62 |
egg chorion | 7.88e-07 | 3 |
subdivision of digestive tract | 8.26e-07 | 118 |
somatic layer of lateral plate mesoderm | 8.44e-07 | 8 |