FFCP PHASE2:Hg19::chr4:21699380..21699386,-: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:80333 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:30083 |TSScla...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=80333 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=30083 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=Q3YAB9 | ||
|association_with_transcript=10bp_to_ENST00000382148_5end | |association_with_transcript=10bp_to_ENST00000382148_5end | ||
|cluster_id=chr4:21699380..21699386,- | |cluster_id=chr4:21699380..21699386,- | ||
Latest revision as of 08:13, 17 September 2015
| Short description: | p20@KCNIP4 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_20_at_KCNIP4_5end |
| Coexpression cluster: | C135_neuroblastoma_retinoblastoma_carcinoid_choriocarcinoma_testicular_acute_rectum |
| Association with transcript: | 10bp_to_ENST00000382148_5end |
| EntrezGene: | KCNIP4 |
| HGNC: | 30083 |
| UniProt: | Q3YAB9 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p20@KCNIP4 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| Merkel cell | 8.28e-14 | 2 |
| epithelial cell of large intestine | 1.21e-13 | 2 |
| intestinal epithelial cell | 1.80e-07 | 4 |
Showing 1 to 3 of 3 entries
| Ontology term | p-value | n |
|---|---|---|
| rectum | 8.66e-26 | 4 |
| gland of diencephalon | 1.62e-25 | 4 |
| neuroendocrine gland | 1.62e-25 | 4 |
| lower digestive tract | 7.35e-21 | 5 |
| diencephalon | 4.69e-15 | 7 |
| future diencephalon | 4.69e-15 | 7 |
| pineal body | 9.40e-14 | 2 |
| regional part of epithalamus | 9.40e-14 | 2 |
| secretory circumventricular organ | 9.40e-14 | 2 |
| circumventricular organ | 9.40e-14 | 2 |
Showing 1 to 10 of 20 entries
