FFCP PHASE2:Hg19::chr15:37393449..37393528,-: Difference between revisions
From FANTOM5_SSTAR
Jump to: navigation, search
(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:4212 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:7001 |TSSclass...") |
No edit summary |
||
| Line 2: | Line 2: | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=4212 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=7001 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=Q96DI2,B7Z6F6,O14770 | ||
|association_with_transcript=0bp_to_ENST00000340545,ENST00000558313,NM_001220482,NM_002399,uc001zjt.2,uc001zju.2_5end | |association_with_transcript=0bp_to_ENST00000340545,ENST00000558313,NM_001220482,NM_002399,uc001zjt.2,uc001zju.2_5end | ||
|cluster_id=chr15:37393449..37393528,- | |cluster_id=chr15:37393449..37393528,- | ||
Latest revision as of 08:34, 17 September 2015
| Short description: | p4@MEIS2 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_4_at_MEIS2_5end |
| Coexpression cluster: | NA |
| Association with transcript: | 0bp_to_ENST00000340545, ENST00000558313, NM_001220482, NM_002399, uc001zjt.2, uc001zju.2_5end |
| EntrezGene: | MEIS2 |
| HGNC: | 7001 |
| UniProt: | Q96DI2B7Z6F6O14770 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p4@MEIS2 |
|---|
0
5
10
15
20
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| anatomical conduit | 6.98e-10 | 240 |
| organ system subdivision | 2.51e-09 | 223 |
| epithelium | 5.48e-08 | 306 |
| structure with developmental contribution from neural crest | 1.45e-07 | 132 |
| tube | 1.56e-07 | 192 |
| cell layer | 2.13e-07 | 309 |
Showing 1 to 6 of 6 entries
