FFCP PHASE2:Hg19::chr1:28477178..28477206,-: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:5724 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript |HGNC=HGNC:9582 ...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=5724 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | ||
|HGNC= | |HGNC=9582 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=P25105 | ||
|association_with_transcript=325bp_to_AB464653,AY275466,BT009801,CU687620,DQ891716,DQ894893,EU832802,GQ129382,L07334_5end | |association_with_transcript=325bp_to_AB464653,AY275466,BT009801,CU687620,DQ891716,DQ894893,EU832802,GQ129382,L07334_5end | ||
|cluster_id=chr1:28477178..28477206,- | |cluster_id=chr1:28477178..28477206,- |
Latest revision as of 09:45, 17 September 2015
Short description: | p9@PTAFR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_PTAFR_5end |
Coexpression cluster: | C107_Neutrophils_CD14_Eosinophils_Monocytederived_Whole_Peripheral_blood |
Association with transcript: | 325bp_to_AB464653, AY275466, BT009801, CU687620, DQ891716, DQ894893, EU832802, GQ129382, L07334_5end |
EntrezGene: | PTAFR |
HGNC: | 9582 |
UniProt: | P25105 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p9@PTAFR |
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0.0
2.5
5.0
7.5
10.0
12.5
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 5.23e-86 | 72 |
defensive cell | 5.88e-86 | 48 |
phagocyte | 5.88e-86 | 48 |
monopoietic cell | 2.04e-80 | 59 |
monocyte | 2.04e-80 | 59 |
monoblast | 2.04e-80 | 59 |
promonocyte | 2.04e-80 | 59 |
macrophage dendritic cell progenitor | 1.48e-77 | 61 |
classical monocyte | 3.29e-76 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.29e-76 | 42 |
Showing 1 to 10 of 32 entries
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.91e-67 | 98 |
blood island | 1.91e-67 | 98 |
bone marrow | 7.92e-61 | 76 |
hemolymphoid system | 2.01e-60 | 108 |
bone element | 7.90e-56 | 82 |
skeletal element | 3.45e-50 | 90 |
immune system | 2.55e-48 | 93 |
skeletal system | 2.15e-44 | 100 |
lateral plate mesoderm | 5.21e-28 | 203 |
musculoskeletal system | 2.30e-23 | 167 |
Showing 1 to 10 of 17 entries