FFCP PHASE1:Hg19::chr19:3558051..3558082,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=126321 | |EntrezGene=126321 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28299 | |HGNC=28299 | ||
|TSSclassifier=strong | |||
|UniProt=Q6NUT3,E9PAJ8,A8MXP7 | |UniProt=Q6NUT3,E9PAJ8,A8MXP7 | ||
|association_with_transcript=-480bp_to_ENST00000355415,ENST00000389395,ENST00000398558,NM_001042680,NM_021731,NM_174983,uc002lxw.2,uc002lxx.2,uc002lxz.2_5end | |association_with_transcript=-480bp_to_ENST00000355415,ENST00000389395,ENST00000398558,NM_001042680,NM_021731,NM_174983,uc002lxw.2,uc002lxx.2,uc002lxz.2_5end | ||
|cluster_id=chr19:3558051..3558082,- | |||
|coexpression_cluster_id=C88 | |coexpression_cluster_id=C88 | ||
|description=CAGE_peak_4_at_MFSD12_5end | |description=CAGE_peak_4_at_MFSD12_5end | ||
|id=chr19:3558051..3558082,- | |id=chr19:3558051..3558082,- | ||
|ontology_enrichment_celltype=CL:0000148;1.40e-41;10!CL:0000147;1.63e-29;14!CL:0002567;1.04e-26;3!CL:0000710;1.90e-20;20!CL:0000075;5.96e-15;27!CL:0002077;1.92e-10;34!CL:0002566;5.31e-10;1 | |ontology_enrichment_celltype=CL:0000148!3.80e-18!10;CL:0000541!3.80e-18!10;CL:0000147!1.26e-12!14;CL:0002567!2.28e-12!3;CL:0002150!4.40e-12!3;CL:0000861!4.40e-12!3;CL:0000453!2.39e-11!5;CL:0000710!1.72e-08!20;CL:0000451!1.06e-07!10 | ||
| | |ontology_enrichment_celltype_v019=CL:0000148;1.40e-41;10!CL:0000147;1.63e-29;14!CL:0002567;1.04e-26;3!CL:0000710;1.90e-20;20!CL:0000075;5.96e-15;27!CL:0002077;1.92e-10;34!CL:0002566;5.31e-10;1 | ||
|ontology_enrichment_disease= | |ontology_enrichment_celltype_v019_2=CL:0000148,1.40e-41,10;CL:0000541,1.40e-41,10;CL:0000147,1.63e-29,14;CL:0002567,1.04e-26,3;CL:0000710,1.90e-20,20;CL:0000075,5.96e-15,27;CL:0002077,1.03e-11,34;CL:0002566,5.31e-10,1;CL:0000333,4.30e-09,41;CL:0000066,9.45e-09,253 | ||
|ontology_enrichment_uberon=UBERON:0001737;1.85e-72;9!UBERON:0001557;1.85e-72;9!UBERON:0000072;3.35e-18;37!UBERON:0000065;1.37e-15;44!UBERON:0001004;1.27e-08;65 | |ontology_enrichment_development_v019=UBERON:0008947;1.10e-21;29 | ||
|ontology_enrichment_disease=DOID:1909!3.07e-08!2;DOID:305!2.36e-07!106;DOID:0050687!2.90e-07!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,3.17e-09,106;DOID:0050687,1.54e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0001737!7.26e-32!9;UBERON:0001557!3.62e-17!19;UBERON:0008947!5.30e-11!38;UBERON:0003258!5.30e-11!38;UBERON:0000072!4.05e-10!46;UBERON:0000065!2.09e-08!53 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;1.85e-72;9!UBERON:0001557;1.85e-72;9!UBERON:0000072;3.35e-18;37!UBERON:0000065;1.37e-15;44!UBERON:0001004;1.27e-08;65 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,1.85e-72,9;UBERON:0001557,9.85e-34,19;UBERON:0008947,5.15e-20,38;UBERON:0003258,5.15e-20,38;UBERON:0000072,6.82e-16,47;UBERON:0000065,1.23e-13,54;UBERON:0001004,1.56e-09,74;UBERON:0001041,7.02e-08,87 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602694528023977,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272906150057846,0,0.306083892370903,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212604299965044,0,0,0,0,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.94826728407911,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.9576700009961,3.70886318171824,3.13314338848527,4.08087699109858,2.17879444092406,4.27087114399974,3.91010793664477,4.70931516300831,3.07797725557112,0,0,0,0,0,0,0,0,0,0,0,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,26.7326134970032,83.2734767717045,51.5756767724207,75.2718762499903,100.25680538574,14.416466776508,14.2913216315289,0,0,0,0,0,0,0,0,0,0,0,0,0.542621605391443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215627574859517,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31178950409327,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.63407695278485,0.139423744278603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19566461893209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.03077549699407,10.7441296116693,7.39039113478883,0,0,0,0,0,0,0.195551382734803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449947783103001,0,0,0,0,0,0,0.179287339332845,0,0,0,0,0,0,0,0,0,0.170388021785422,0.113312091520126,0,0,0,0,0,0,0,0,0,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0,0,0,0.606596470166591,3.42558400253961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.545545977607678,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.36402216187572,0.930053882193542,0.163565394255844,0,0,0,0,0.106691729694141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0.118193840883968,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111855431797792,0,0,0,0,0,0,0,0,0,0,0.109940516745429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0,0,0,0.0814032686109745,0,0,0,0,0,0,0,0.201273793591026,0 | ||
|short_description=p4@MFSD12 | |short_description=p4@MFSD12 | ||
}} | }} |
Latest revision as of 09:47, 17 September 2015
Short description: | p4@MFSD12 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_MFSD12_5end |
Coexpression cluster: | C88_Melanocyte_melanoma_Macrophage_Mesenchymal_migratory_Dendritic_Monocytederived |
Association with transcript: | -480bp_to_ENST00000355415, ENST00000389395, ENST00000398558, NM_001042680, NM_021731, NM_174983, uc002lxw.2, uc002lxx.2, uc002lxz.2_5end |
EntrezGene: | MFSD12 |
HGNC: | 28299 |
UniProt: | Q6NUT3E9PAJ8A8MXP7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 1.40e-41 | 10 |
melanoblast | 1.40e-41 | 10 |
pigment cell | 1.63e-29 | 14 |
light melanocyte | 1.04e-26 | 3 |
neurecto-epithelial cell | 1.90e-20 | 20 |
columnar/cuboidal epithelial cell | 5.96e-15 | 27 |
ecto-epithelial cell | 1.03e-11 | 34 |
dark melanocyte | 5.31e-10 | 1 |
migratory neural crest cell | 4.30e-09 | 41 |
epithelial cell | 9.45e-09 | 253 |
Ontology term | p-value | n |
---|---|---|
larynx | 1.85e-72 | 9 |
upper respiratory tract | 9.85e-34 | 19 |
respiratory primordium | 5.15e-20 | 38 |
endoderm of foregut | 5.15e-20 | 38 |
segment of respiratory tract | 6.82e-16 | 47 |
respiratory tract | 1.23e-13 | 54 |
respiratory system | 1.56e-09 | 74 |
foregut | 7.02e-08 | 87 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 3.17e-09 | 106 |
cell type cancer | 1.54e-07 | 143 |