FFCP PHASE1:Hg19::chr6:27215494..27215516,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10279 | |EntrezGene=10279 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9480 | |HGNC=9480 | ||
|TSSclassifier=strong | |||
|UniProt=Q9NQE7,C9JI59,C9JDN6,F8WF25,F8WBG5 | |UniProt=Q9NQE7,C9JI59,C9JDN6,F8WF25,F8WBG5 | ||
|association_with_transcript=0bp_to_ENST00000230582,ENST00000343467,ENST00000348953,ENST00000466364,ENST00000468930,ENST00000470870,NM_005865,uc003nja.2,uc003njb.2,uc011dkt.1_5end | |association_with_transcript=0bp_to_ENST00000230582,ENST00000343467,ENST00000348953,ENST00000466364,ENST00000468930,ENST00000470870,NM_005865,uc003nja.2,uc003njb.2,uc011dkt.1_5end | ||
|cluster_id=chr6:27215494..27215516,+ | |||
|coexpression_cluster_id=C28 | |||
|description=CAGE_peak_1_at_PRSS16_5end | |description=CAGE_peak_1_at_PRSS16_5end | ||
|id=chr6:27215494..27215516,+ | |id=chr6:27215494..27215516,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0004872;1.80e-23;7!UBERON:0006965;4.66e-21;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!3.83e-24!7;UBERON:0002370!2.26e-19!4;UBERON:0005058!2.26e-19!4;UBERON:0009113!2.26e-19!4;UBERON:0003295!2.26e-19!4;UBERON:0005562!2.26e-19!4;UBERON:0007190!3.91e-19!1;UBERON:0002372!4.69e-19!1;UBERON:0001961!4.69e-19!1;UBERON:0001744!4.69e-19!1;UBERON:0001735!4.69e-19!1;UBERON:0000974!3.79e-17!10;UBERON:0001042!5.26e-17!10;UBERON:0009145!5.26e-17!10;UBERON:0006562!1.60e-15!11;UBERON:0003351!2.95e-13!6;UBERON:0000341!1.89e-10!2;UBERON:0001557!2.98e-09!19;UBERON:0003408!2.53e-08!10;UBERON:0009722!1.20e-07!11;UBERON:0007690!1.20e-07!11;UBERON:0002106!2.32e-07!3;UBERON:0004854!2.32e-07!3;UBERON:0009034!2.32e-07!3;UBERON:0002095!2.32e-07!3;UBERON:0004782!2.32e-07!3;UBERON:0003281!2.32e-07!3;UBERON:0009664!2.32e-07!3;UBERON:0002296!2.32e-07!3;UBERON:0005602!2.32e-07!3;UBERON:0001179!2.32e-07!3;UBERON:0006293!2.32e-07!3;UBERON:0005057!5.92e-07!26 | |ontology_enrichment_uberon=UBERON:0004177!3.83e-24!7;UBERON:0002370!2.26e-19!4;UBERON:0005058!2.26e-19!4;UBERON:0009113!2.26e-19!4;UBERON:0003295!2.26e-19!4;UBERON:0005562!2.26e-19!4;UBERON:0007190!3.91e-19!1;UBERON:0002372!4.69e-19!1;UBERON:0001961!4.69e-19!1;UBERON:0001744!4.69e-19!1;UBERON:0001735!4.69e-19!1;UBERON:0000974!3.79e-17!10;UBERON:0001042!5.26e-17!10;UBERON:0009145!5.26e-17!10;UBERON:0006562!1.60e-15!11;UBERON:0003351!2.95e-13!6;UBERON:0000341!1.89e-10!2;UBERON:0001557!2.98e-09!19;UBERON:0003408!2.53e-08!10;UBERON:0009722!1.20e-07!11;UBERON:0007690!1.20e-07!11;UBERON:0002106!2.32e-07!3;UBERON:0004854!2.32e-07!3;UBERON:0009034!2.32e-07!3;UBERON:0002095!2.32e-07!3;UBERON:0004782!2.32e-07!3;UBERON:0003281!2.32e-07!3;UBERON:0009664!2.32e-07!3;UBERON:0002296!2.32e-07!3;UBERON:0005602!2.32e-07!3;UBERON:0001179!2.32e-07!3;UBERON:0006293!2.32e-07!3;UBERON:0005057!5.92e-07!26 | ||
|ontology_enrichment_uberon_v019=UBERON:0002370;1.05e-79;2!UBERON:0005058;1.05e-79;2!UBERON:0009113;1.05e-79;2!UBERON:0004177;2.52e-71;5!UBERON:0005057;2.52e-71;5!UBERON:0000341;5.70e-21;2!UBERON:0002106;2.09e-14;3!UBERON:0000077;4.96e-14;27!UBERON:0002405;4.96e-14;27!UBERON:0002390;3.87e-10;32!UBERON:0000974;6.78e-08;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004177,2.73e-51,7;UBERON:0005057,2.73e-51,7;UBERON:0002370,1.48e-40,4;UBERON:0005058,1.48e-40,4;UBERON:0009113,1.48e-40,4;UBERON:0003295,1.48e-40,4;UBERON:0005562,1.48e-40,4;UBERON:0000974,2.70e-36,10;UBERON:0003351,1.82e-27,6;UBERON:0000341,5.70e-21,2;UBERON:0003408,5.90e-17,10;UBERON:0001042,5.90e-17,10;UBERON:0009145,5.90e-17,10;UBERON:0006562,1.62e-15,11;UBERON:0009722,1.62e-15,11;UBERON:0007690,1.62e-15,11;UBERON:0002106,2.09e-14,3;UBERON:0004854,2.09e-14,3;UBERON:0009034,2.09e-14,3;UBERON:0002095,2.09e-14,3;UBERON:0004782,2.09e-14,3;UBERON:0003281,2.09e-14,3;UBERON:0009664,2.09e-14,3;UBERON:0002296,2.09e-14,3;UBERON:0005602,2.09e-14,3;UBERON:0001179,2.09e-14,3;UBERON:0006293,2.09e-14,3;UBERON:0000077,4.01e-13,29;UBERON:0008814,6.79e-10,18;UBERON:0001557,1.99e-09,19 | |||
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|short_description=p1@PRSS16 | |short_description=p1@PRSS16 | ||
}} | }} |
Latest revision as of 10:31, 17 September 2015
Short description: | p1@PRSS16 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PRSS16_5end |
Coexpression cluster: | C28_thymus_acute_vein_Hodgkin_chronic_throat_Dendritic |
Association with transcript: | 0bp_to_ENST00000230582, ENST00000343467, ENST00000348953, ENST00000466364, ENST00000468930, ENST00000470870, NM_005865, uc003nja.2, uc003njb.2, uc011dkt.1_5end |
EntrezGene: | PRSS16 |
HGNC: | 9480 |
UniProt: | Q9NQE7C9JI59C9JDN6F8WF25F8WBG5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hemopoietic organ | 2.73e-51 | 7 |
immune organ | 2.73e-51 | 7 |
thymus | 1.48e-40 | 4 |
hemolymphoid system gland | 1.48e-40 | 4 |
thymic region | 1.48e-40 | 4 |
pharyngeal gland | 1.48e-40 | 4 |
thymus primordium | 1.48e-40 | 4 |
neck | 2.70e-36 | 10 |
pharyngeal epithelium | 1.82e-27 | 6 |
throat | 5.70e-21 | 2 |
gland of gut | 5.90e-17 | 10 |
chordate pharynx | 5.90e-17 | 10 |
pharyngeal region of foregut | 5.90e-17 | 10 |
pharynx | 1.62e-15 | 11 |
entire pharyngeal arch endoderm | 1.62e-15 | 11 |
early pharyngeal endoderm | 1.62e-15 | 11 |
spleen | 2.09e-14 | 3 |
gastrointestinal system mesentery | 2.09e-14 | 3 |
stomach region | 2.09e-14 | 3 |
mesentery | 2.09e-14 | 3 |
gastrointestinal system serosa | 2.09e-14 | 3 |
mesentery of stomach | 2.09e-14 | 3 |
gut mesentery | 2.09e-14 | 3 |
dorsal mesentery | 2.09e-14 | 3 |
dorsal mesogastrium | 2.09e-14 | 3 |
peritoneal cavity | 2.09e-14 | 3 |
spleen primordium | 2.09e-14 | 3 |
mixed endoderm/mesoderm-derived structure | 4.01e-13 | 29 |
pharyngeal arch system | 6.79e-10 | 18 |
upper respiratory tract | 1.99e-09 | 19 |