FFCP PHASE1:Hg19::chr1:154941296..154941309,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr1:154941296..154941309,-
|short_description=p22@SHC1
|description=CAGE_peak_22_at_SHC1_5end
|association_with_transcript=40bp_to_ENST00000444179_5end
|Entre...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6464 | |EntrezGene=6464 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10840 | |HGNC=10840 | ||
|TSSclassifier=strong | |||
|UniProt=Q5T187 | |UniProt=Q5T187 | ||
|association_with_transcript=40bp_to_ENST00000444179_5end | |||
|cluster_id=chr1:154941296..154941309,- | |||
|description=CAGE_peak_22_at_SHC1_5end | |||
|id=chr1:154941296..154941309,- | |||
|ontology_enrichment_celltype=CL:0002321!1.46e-07!248;CL:0000220!2.18e-07!246;CL:0000066!5.69e-07!254 | |||
|ontology_enrichment_celltype_v019=CL:0002581;4.22e-21;1!CL:0000312;8.13e-17;5!CL:0000240;3.47e-14;6!CL:0000311;3.47e-14;6!CL:0000079;3.47e-14;6!CL:0000237;3.47e-14;6!CL:0000123;3.02e-11;2!CL:0000242;3.02e-11;2!CL:0000362;8.83e-10;9!CL:0000632;6.34e-08;3!CL:0002582;6.34e-08;3!CL:0002592;6.34e-08;3!CL:0002334;1.47e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0002581,3.45e-21,1;CL:0000312,1.31e-16,5;CL:0000240,5.17e-14,6;CL:0000311,5.17e-14,6;CL:0000079,5.17e-14,6;CL:0000237,5.17e-14,6;CL:0000036,5.17e-14,6;CL:0000357,5.17e-14,6;CL:0000114,5.17e-14,6;CL:0000242,4.52e-11,2;CL:0000362,1.15e-09,9;CL:0002592,5.18e-08,3;CL:0000632,6.34e-08,3;CL:0002582,7.76e-08,3;CL:0002334,1.57e-07,12 | |||
|ontology_enrichment_development_v019=CL:0000357;3.47e-14;6!CL:0000114;3.47e-14;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3371;1.53e-21;1!DOID:4549;1.53e-21;1!DOID:5861;1.53e-21;1!DOID:6496;1.53e-21;1!DOID:3307;3.02e-11;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3371,1.53e-21,1;DOID:4549,1.53e-21,1;DOID:5861,1.53e-21,1;DOID:6496,1.53e-21,1;DOID:3307,2.02e-11,2 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0005406;3.02e-11;2!UBERON:0002418;4.52e-08;3!UBERON:0004755;4.52e-08;3!UBERON:0003498;6.34e-08;3!UBERON:0005985;6.34e-08;3!UBERON:0001621;6.34e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005406,2.73e-11,2;UBERON:0002418,4.52e-08,3;UBERON:0004755,4.52e-08,3;UBERON:0001621,5.18e-08,3 | |||
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|short_description=p22@SHC1 | |||
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Latest revision as of 10:38, 17 September 2015
Short description: | p22@SHC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_22_at_SHC1_5end |
Coexpression cluster: | NA |
Association with transcript: | 40bp_to_ENST00000444179_5end |
EntrezGene: | SHC1 |
HGNC: | 10840 |
UniProt: | Q5T187 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
perirenal preadipocyte | 3.45e-21 | 1 |
keratinocyte | 1.31e-16 | 5 |
stratified squamous epithelial cell | 5.17e-14 | 6 |
keratin accumulating cell | 5.17e-14 | 6 |
stratified epithelial cell | 5.17e-14 | 6 |
keratinizing barrier epithelial cell | 5.17e-14 | 6 |
epithelial fate stem cell | 5.17e-14 | 6 |
stratified epithelial stem cell | 5.17e-14 | 6 |
surface ectodermal cell | 5.17e-14 | 6 |
Merkel cell | 4.52e-11 | 2 |
epidermal cell | 1.15e-09 | 9 |
smooth muscle cell of the coronary artery | 5.18e-08 | 3 |
hepatic stellate cell | 6.34e-08 | 3 |
visceral preadipocyte | 7.76e-08 | 3 |
preadipocyte | 1.57e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
perirenal fat | 2.73e-11 | 2 |
cartilage tissue | 4.52e-08 | 3 |
skeletal tissue | 4.52e-08 | 3 |
coronary artery | 5.18e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 1.53e-21 | 1 |
extraosseous chondrosarcoma | 1.53e-21 | 1 |
myxoid chondrosarcoma | 1.53e-21 | 1 |
extraskeletal myxoid chondrosarcoma | 1.53e-21 | 1 |
teratoma | 2.02e-11 | 2 |