FFCP PHASE1:Hg19::chr1:154941296..154941309,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6464 | |EntrezGene=6464 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10840 | |HGNC=10840 | ||
|TSSclassifier=strong | |||
|UniProt=Q5T187 | |UniProt=Q5T187 | ||
|association_with_transcript=40bp_to_ENST00000444179_5end | |association_with_transcript=40bp_to_ENST00000444179_5end | ||
|cluster_id=chr1:154941296..154941309,- | |||
|description=CAGE_peak_22_at_SHC1_5end | |description=CAGE_peak_22_at_SHC1_5end | ||
|id=chr1:154941296..154941309,- | |id=chr1:154941296..154941309,- | ||
|ontology_enrichment_celltype=CL:0002321!1.46e-07!248;CL:0000220!2.18e-07!246;CL:0000066!5.69e-07!254 | |ontology_enrichment_celltype=CL:0002321!1.46e-07!248;CL:0000220!2.18e-07!246;CL:0000066!5.69e-07!254 | ||
|ontology_enrichment_celltype_v019=CL:0002581;4.22e-21;1!CL:0000312;8.13e-17;5!CL:0000240;3.47e-14;6!CL:0000311;3.47e-14;6!CL:0000079;3.47e-14;6!CL:0000237;3.47e-14;6!CL:0000123;3.02e-11;2!CL:0000242;3.02e-11;2!CL:0000362;8.83e-10;9!CL:0000632;6.34e-08;3!CL:0002582;6.34e-08;3!CL:0002592;6.34e-08;3!CL:0002334;1.47e-07;12 | |ontology_enrichment_celltype_v019=CL:0002581;4.22e-21;1!CL:0000312;8.13e-17;5!CL:0000240;3.47e-14;6!CL:0000311;3.47e-14;6!CL:0000079;3.47e-14;6!CL:0000237;3.47e-14;6!CL:0000123;3.02e-11;2!CL:0000242;3.02e-11;2!CL:0000362;8.83e-10;9!CL:0000632;6.34e-08;3!CL:0002582;6.34e-08;3!CL:0002592;6.34e-08;3!CL:0002334;1.47e-07;12 | ||
|ontology_enrichment_celltype_v019_2=CL:0002581,3.45e-21,1;CL:0000312,1.31e-16,5;CL:0000240,5.17e-14,6;CL:0000311,5.17e-14,6;CL:0000079,5.17e-14,6;CL:0000237,5.17e-14,6;CL:0000036,5.17e-14,6;CL:0000357,5.17e-14,6;CL:0000114,5.17e-14,6;CL:0000242,4.52e-11,2;CL:0000362,1.15e-09,9;CL:0002592,5.18e-08,3;CL:0000632,6.34e-08,3;CL:0002582,7.76e-08,3;CL:0002334,1.57e-07,12 | |||
|ontology_enrichment_development_v019=CL:0000357;3.47e-14;6!CL:0000114;3.47e-14;6 | |ontology_enrichment_development_v019=CL:0000357;3.47e-14;6!CL:0000114;3.47e-14;6 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3371;1.53e-21;1!DOID:4549;1.53e-21;1!DOID:5861;1.53e-21;1!DOID:6496;1.53e-21;1!DOID:3307;3.02e-11;2 | |ontology_enrichment_disease_v019=DOID:3371;1.53e-21;1!DOID:4549;1.53e-21;1!DOID:5861;1.53e-21;1!DOID:6496;1.53e-21;1!DOID:3307;3.02e-11;2 | ||
|ontology_enrichment_disease_v019_2=DOID:3371,1.53e-21,1;DOID:4549,1.53e-21,1;DOID:5861,1.53e-21,1;DOID:6496,1.53e-21,1;DOID:3307,2.02e-11,2 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0005406;3.02e-11;2!UBERON:0002418;4.52e-08;3!UBERON:0004755;4.52e-08;3!UBERON:0003498;6.34e-08;3!UBERON:0005985;6.34e-08;3!UBERON:0001621;6.34e-08;3 | |ontology_enrichment_uberon_v019=UBERON:0005406;3.02e-11;2!UBERON:0002418;4.52e-08;3!UBERON:0004755;4.52e-08;3!UBERON:0003498;6.34e-08;3!UBERON:0005985;6.34e-08;3!UBERON:0001621;6.34e-08;3 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0005406,2.73e-11,2;UBERON:0002418,4.52e-08,3;UBERON:0004755,4.52e-08,3;UBERON:0001621,5.18e-08,3 | |||
|phase1_expression=0,0.214100523890983,0.140954404095971,0,0,0,0,0,0.522371256399677,0,0,0,0,0.37129905888014,0,0,0,0,0,0.123121058076788,0,0,0,0.273748850145768,0,0.0764134057479513,0,0,0,0.383829398097213,0,0.919421224478927,0.30120591877825,0,0.0774672005803016,0,0,0,0,0,0,0,0,0,0,0,0.232429036905685,0,0,0,0,0,0,0,0,0,0.272906150057846,0,0,0.320929027076094,0.639337125799041,0.329851300186716,0,0,0,0,0,0,0,0,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164437904603676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0.087834785693126,0,0,0,0,0,0.132957960518865,0,0,0,0,0,0.347140501607594,0,0.419499436209906,0,0.417989933073621,0,0,0,0,0,0.24406205754817,0,0.81014194788176,0.17859945656816,0.22452937262617,0,0,0,0.183201743930407,0,0,0,0,0,0.132409180813219,0,0,0.560677600142307,0,0.49333509683432,0,0.134710672069688,0.163461903113459,0,0,0,0.936480230490962,0,0.298897361103602,0,0.161872944368132,0,0,0.122834317311768,0.206651562351531,0,0,0,0.718618141816238,0,0.250237039743928,0,0.438977620880838,0.612975591598039,0.300476117813194,0.226864366320042,0.179389635688862,0,0,0,0,0,0,0,0.0974370051611986,0.252433774244115,0,0.161646056818812,0,0,0,0.193260853163297,0,0.286804595389004,0.243947412259191,0,0.232387885739037,0,0,0,0,0,0,0,0,0,0,0.241011029883482,0.110293972732394,0,0.237270619111097,0,0,0,0,0,0,1.47008711385542,0,0,0,0,0,0,0.219500570817251,1.1240175325762,0.100528972411631,0.277765335475589,0.325808305310325,0,0,0,0.234817388471643,0.144366447761074,0,0,0,0,0,0.234004265139238,0,0,0.16798212819886,0,0.179117045405697,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0.112131084345361,0,0,0,0,0,0,0,0.257207374262142,0,0,0,0,0,0,0.355391948742546,0.791951872933429,0.602878754119172,0,0.299918973546171,0,0,0,0,1.14861935834114,0,0.289562613335158,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0.535286966391485,0.315404830067869,0.117141414992713,0,0,0,0,0.184369168541703,0.173767228936166,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0.160853921143607,1.48418066444991,0,0,0,1.03850885836724,0.116210378459959,0,0,0.368323955743585,0.114814448164607,0,0.131124414959424,0.451199612907412,0,0.784349769176855,0,0,0,0.170093705276516,0.431831832204279,1.54227252690289,0,0.501689773854853,0,0,0,0,0,0,0,0,0,0.0915694648183434,0,0,0.650060246036521,0,0.096670718292122,0.462145851343933,0.15350367472613,0,0,0.290033387828457,0.170453254832202,0.0890320356467374,0.165284915360978,0.192190067365106,0.255225424989168,0.30347334256665,0,0,0,0.308033580176089,0,0,0.55597265731176,0.143124886741991,0,0,0,0.255897791311334,0,0,0,0,0,0.589062011728432,0,1.58510321173008,0,0,0.487426979262569,0,0,0.141405431953713,0,0.551365343546124,0,0,0,0,0.202910376962704,0.30982349809975,0,0,0,0.35667105148125,0,0,0,0,0.349934720244983,0.288666338176536,0,0,0.0941438007767792,0.86101074534246,0,0.886860307073351,0,0,0,0,0,0.411362273086194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1605880751037,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0.485442086998054,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179021174675609,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0.472775363535873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0.210998064528027,0.163232808159148,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485560759068186,0,0,0,0.063186579628488,0,0,0.664653872707185,0,0.313932918407225,0,0,0.138674673013139,0,0.0979923974143777,0,0,0.171986032471617,0,0,0,0.0969890164884194,3.61850119435151,0,0,0,0,0,0.160317640503067,0,0,0.144090417154106,0,0.171594997861965,0,0.745515213392595,0,0,0.209205692624666,0.101998217636322,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0.720599767084807,0,0.0787831823072236,0,0,0,0,0,0,0,0.275078873194468,0,0,0,0,0,0,0,0.211200673038813,0.35857467866569,0,0,0,0,0.542999601753713,0.864221491201268,0.326587360109409,0,0.082092520749339,0.340776043570843,0.226624183040251,0,0,0,0,0,0,0,0,0,0,0.197611631897944,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0,0,0.124980407962107,0.303298235083296,0.285465333544967,0,0,1.01444720027578,0,0,0,0.189403005275089,0.251567901752575,0,0.228840068396924,0,0,0,0,0,0,0,0,0,0.150257608997218,0,0,0,0,0,0.398095888698616,0.400027764663154,0.343395705182793,0,0,0,0,0.521988583930423,0.226705925512272,0.463044948647668,0,0.179088841081487,0.308801447160972,0.219284049578707,0.176689145945881,0,0.168942440653073,0.256241518587947,0,0,0,0,0,0,0,0.245772908753719,0.211312123358627,0,0.106691729694141,0,0.567515953566836,0,0.139879507719444,0,0,0,0,0.54604819096007,0.169732529954025,0,0,0.558644917973244,0.318004350653419,0,0,0,0.3062454773532,0,0,0,0,0,0.0691572524642179,0,0,0.0981477185010256,0,0.183428598521679,0,0,0,0.198916222116275,0.0752103283492573,0,0,0,0.163771917510097,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0,0,0,0.236387681767936,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0.62164849248911,0.17071847709395,0,0,0,0.170426809518315,0,0,0,0,0.111855431797792,0.098150233615243,0,0,0,0,0,0,0.198950775161368,0,0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| ||
|short_description=p22@SHC1 | |short_description=p22@SHC1 | ||
}} | }} |
Latest revision as of 10:38, 17 September 2015
Short description: | p22@SHC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_22_at_SHC1_5end |
Coexpression cluster: | NA |
Association with transcript: | 40bp_to_ENST00000444179_5end |
EntrezGene: | SHC1 |
HGNC: | 10840 |
UniProt: | Q5T187 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
perirenal preadipocyte | 3.45e-21 | 1 |
keratinocyte | 1.31e-16 | 5 |
stratified squamous epithelial cell | 5.17e-14 | 6 |
keratin accumulating cell | 5.17e-14 | 6 |
stratified epithelial cell | 5.17e-14 | 6 |
keratinizing barrier epithelial cell | 5.17e-14 | 6 |
epithelial fate stem cell | 5.17e-14 | 6 |
stratified epithelial stem cell | 5.17e-14 | 6 |
surface ectodermal cell | 5.17e-14 | 6 |
Merkel cell | 4.52e-11 | 2 |
epidermal cell | 1.15e-09 | 9 |
smooth muscle cell of the coronary artery | 5.18e-08 | 3 |
hepatic stellate cell | 6.34e-08 | 3 |
visceral preadipocyte | 7.76e-08 | 3 |
preadipocyte | 1.57e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
perirenal fat | 2.73e-11 | 2 |
cartilage tissue | 4.52e-08 | 3 |
skeletal tissue | 4.52e-08 | 3 |
coronary artery | 5.18e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 1.53e-21 | 1 |
extraosseous chondrosarcoma | 1.53e-21 | 1 |
myxoid chondrosarcoma | 1.53e-21 | 1 |
extraskeletal myxoid chondrosarcoma | 1.53e-21 | 1 |
teratoma | 2.02e-11 | 2 |