FFCP PHASE1:Hg19::chr1:155211022..155211062,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2629 | |EntrezGene=2629 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4177 | |HGNC=4177 | ||
|TSSclassifier=strong | |||
|UniProt=P04062,F5GYD8 | |UniProt=P04062,F5GYD8 | ||
|association_with_transcript=0bp_to_ENST00000368373,ENST00000402928,ENST00000470104,ENST00000484489,ENST00000536555,uc001fjh.2,uc010pfw.1,uc010pfx.1_5end | |association_with_transcript=0bp_to_ENST00000368373,ENST00000402928,ENST00000470104,ENST00000484489,ENST00000536555,uc001fjh.2,uc010pfw.1,uc010pfx.1_5end | ||
|cluster_id=chr1:155211022..155211062,- | |||
|description=CAGE_peak_1_at_GBA_5end | |description=CAGE_peak_1_at_GBA_5end | ||
|id=chr1:155211022..155211062,- | |id=chr1:155211022..155211062,- | ||
|ontology_enrichment_celltype=CL:0000055!3.39e-16!180;CL:0000222!1.08e-12!119;CL:0000548!1.12e-11!679;CL:0000004!1.12e-11!679;CL:0000255!1.12e-11!679;CL:0002371!2.91e-11!591;CL:0000057!3.55e-11!75;CL:0000144!4.94e-11!625;CL:0000012!6.62e-11!682;CL:0000003!2.90e-09!722;CL:0000048!3.58e-09!430;CL:0000723!2.12e-08!436;CL:0000213!1.06e-07!57;CL:0000215!1.06e-07!57;CL:0000192!1.25e-07!42;CL:0000514!1.25e-07!42;CL:0000183!8.52e-07!59 | |ontology_enrichment_celltype=CL:0000055!3.39e-16!180;CL:0000222!1.08e-12!119;CL:0000548!1.12e-11!679;CL:0000004!1.12e-11!679;CL:0000255!1.12e-11!679;CL:0002371!2.91e-11!591;CL:0000057!3.55e-11!75;CL:0000144!4.94e-11!625;CL:0000012!6.62e-11!682;CL:0000003!2.90e-09!722;CL:0000048!3.58e-09!430;CL:0000723!2.12e-08!436;CL:0000213!1.06e-07!57;CL:0000215!1.06e-07!57;CL:0000192!1.25e-07!42;CL:0000514!1.25e-07!42;CL:0000183!8.52e-07!59 | ||
|ontology_enrichment_celltype_v019=CL:0000134;4.83e-09;55!CL:0000048;3.13e-08;58!CL:0000723;2.88e-07;61 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,7.56e-13,121;CL:0000057,2.82e-11,76;CL:0000048,9.74e-09,427;CL:0000213,5.10e-08,58;CL:0000215,5.10e-08,58;CL:0000723,5.49e-08,433;CL:0000192,2.17e-07,43;CL:0000514,2.17e-07,43 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003081!1.25e-09!216;UBERON:0000467!5.78e-09!625;UBERON:0000926!6.76e-09!448;UBERON:0004120!6.76e-09!448;UBERON:0006603!6.76e-09!448;UBERON:0000468!6.77e-09!659;UBERON:0000480!9.23e-09!626;UBERON:0002204!1.45e-08!167;UBERON:0002049!5.05e-07!79;UBERON:0007798!5.05e-07!79;UBERON:0004535!9.04e-07!110 | |ontology_enrichment_uberon=UBERON:0003081!1.25e-09!216;UBERON:0000467!5.78e-09!625;UBERON:0000926!6.76e-09!448;UBERON:0004120!6.76e-09!448;UBERON:0006603!6.76e-09!448;UBERON:0000468!6.77e-09!659;UBERON:0000480!9.23e-09!626;UBERON:0002204!1.45e-08!167;UBERON:0002049!5.05e-07!79;UBERON:0007798!5.05e-07!79;UBERON:0004535!9.04e-07!110 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000926,4.87e-11,315;UBERON:0004120,4.87e-11,315;UBERON:0006603,4.87e-11,315;UBERON:0002204,1.98e-08,167;UBERON:0003081,2.64e-08,203;UBERON:0002049,6.33e-07,78;UBERON:0007798,6.33e-07,78 | |||
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| ||
|short_description=p1@GBA | |short_description=p1@GBA | ||
}} | }} |
Latest revision as of 11:57, 17 September 2015
Short description: | p1@GBA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_GBA_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000368373, ENST00000402928, ENST00000470104, ENST00000484489, ENST00000536555, uc001fjh.2, uc010pfw.1, uc010pfx.1_5end |
EntrezGene: | GBA |
HGNC: | 4177 |
UniProt: | P04062F5GYD8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 7.56e-13 | 121 |
fibroblast | 2.82e-11 | 76 |
multi fate stem cell | 9.74e-09 | 427 |
lining cell | 5.10e-08 | 58 |
barrier cell | 5.10e-08 | 58 |
somatic stem cell | 5.49e-08 | 433 |
smooth muscle cell | 2.17e-07 | 43 |
smooth muscle myoblast | 2.17e-07 | 43 |
Ontology term | p-value | n |
---|---|---|
mesoderm | 4.87e-11 | 315 |
mesoderm-derived structure | 4.87e-11 | 315 |
presumptive mesoderm | 4.87e-11 | 315 |
musculoskeletal system | 1.98e-08 | 167 |
lateral plate mesoderm | 2.64e-08 | 203 |
vasculature | 6.33e-07 | 78 |
vascular system | 6.33e-07 | 78 |