FFCP PHASE1:Hg19::chr1:155214401..155214431,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2629 | |EntrezGene=2629 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4177 | |HGNC=4177 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000473570,ENST00000493842_5end | |association_with_transcript=0bp_to_ENST00000473570,ENST00000493842_5end | ||
|cluster_id=chr1:155214401..155214431,- | |||
|description=CAGE_peak_2_at_GBA_5end | |description=CAGE_peak_2_at_GBA_5end | ||
|id=chr1:155214401..155214431,- | |id=chr1:155214401..155214431,- | ||
|ontology_enrichment_celltype=CL:0000055!2.46e-28!180;CL:0000057!3.72e-14!75;CL:0000548!3.96e-10!679;CL:0000004!3.96e-10!679;CL:0000255!3.96e-10!679;CL:0000012!1.68e-09!682;CL:0000222!9.09e-09!119;CL:0000220!1.08e-08!246;CL:0002321!4.05e-08!248;CL:0000333!4.64e-08!41;CL:0000183!9.26e-08!59;CL:0002371!2.86e-07!591;CL:0000144!7.41e-07!625;CL:0000680!7.71e-07!57;CL:0000056!7.71e-07!57;CL:0000355!7.71e-07!57 | |ontology_enrichment_celltype=CL:0000055!2.46e-28!180;CL:0000057!3.72e-14!75;CL:0000548!3.96e-10!679;CL:0000004!3.96e-10!679;CL:0000255!3.96e-10!679;CL:0000012!1.68e-09!682;CL:0000222!9.09e-09!119;CL:0000220!1.08e-08!246;CL:0002321!4.05e-08!248;CL:0000333!4.64e-08!41;CL:0000183!9.26e-08!59;CL:0002371!2.86e-07!591;CL:0000144!7.41e-07!625;CL:0000680!7.71e-07!57;CL:0000056!7.71e-07!57;CL:0000355!7.71e-07!57 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.11e-13,76;CL:0000222,3.67e-09,121;CL:0002321,1.91e-08,250;CL:0000333,4.57e-08,41;CL:0000680,6.17e-07,58;CL:0000056,6.17e-07,58;CL:0000355,6.17e-07,58;CL:0000192,9.91e-07,43;CL:0000514,9.91e-07,43 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!2.23e-11!365;UBERON:0000119!9.22e-08!312;UBERON:0000483!2.43e-07!309;UBERON:0000914!4.74e-07!83;UBERON:0002329!4.74e-07!83;UBERON:0003077!4.74e-07!83;UBERON:0003059!4.74e-07!83;UBERON:0007282!4.74e-07!83;UBERON:0009618!4.74e-07!83;UBERON:0007285!4.74e-07!83 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000119,1.70e-08,309;UBERON:0000483,4.71e-08,306;UBERON:0007503,8.27e-08,78;UBERON:0002049,9.97e-07,78;UBERON:0007798,9.97e-07,78 | |||
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| ||
|short_description=p2@GBA | |short_description=p2@GBA | ||
}} | }} |
Latest revision as of 12:00, 17 September 2015
Short description: | p2@GBA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_GBA_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000473570, ENST00000493842_5end |
EntrezGene: | GBA |
HGNC: | 4177 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.11e-13 | 76 |
mesodermal cell | 3.67e-09 | 121 |
embryonic cell | 1.91e-08 | 250 |
migratory neural crest cell | 4.57e-08 | 41 |
muscle precursor cell | 6.17e-07 | 58 |
myoblast | 6.17e-07 | 58 |
multi-potent skeletal muscle stem cell | 6.17e-07 | 58 |
smooth muscle cell | 9.91e-07 | 43 |
smooth muscle myoblast | 9.91e-07 | 43 |
Ontology term | p-value | n |
---|---|---|
cell layer | 1.70e-08 | 309 |
epithelium | 4.71e-08 | 306 |
epithelial vesicle | 8.27e-08 | 78 |
vasculature | 9.97e-07 | 78 |
vascular system | 9.97e-07 | 78 |