FFCP PHASE1:Hg19::chr1:155214401..155214431,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2629 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4177 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000473570,ENST00000493842_5end | |||
|cluster_id=chr1:155214401..155214431,- | |||
|description=CAGE_peak_2_at_GBA_5end | |||
|id=chr1:155214401..155214431,- | |||
|ontology_enrichment_celltype=CL:0000055!2.46e-28!180;CL:0000057!3.72e-14!75;CL:0000548!3.96e-10!679;CL:0000004!3.96e-10!679;CL:0000255!3.96e-10!679;CL:0000012!1.68e-09!682;CL:0000222!9.09e-09!119;CL:0000220!1.08e-08!246;CL:0002321!4.05e-08!248;CL:0000333!4.64e-08!41;CL:0000183!9.26e-08!59;CL:0002371!2.86e-07!591;CL:0000144!7.41e-07!625;CL:0000680!7.71e-07!57;CL:0000056!7.71e-07!57;CL:0000355!7.71e-07!57 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.11e-13,76;CL:0000222,3.67e-09,121;CL:0002321,1.91e-08,250;CL:0000333,4.57e-08,41;CL:0000680,6.17e-07,58;CL:0000056,6.17e-07,58;CL:0000355,6.17e-07,58;CL:0000192,9.91e-07,43;CL:0000514,9.91e-07,43 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!2.23e-11!365;UBERON:0000119!9.22e-08!312;UBERON:0000483!2.43e-07!309;UBERON:0000914!4.74e-07!83;UBERON:0002329!4.74e-07!83;UBERON:0003077!4.74e-07!83;UBERON:0003059!4.74e-07!83;UBERON:0007282!4.74e-07!83;UBERON:0009618!4.74e-07!83;UBERON:0007285!4.74e-07!83 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000119,1.70e-08,309;UBERON:0000483,4.71e-08,306;UBERON:0007503,8.27e-08,78;UBERON:0002049,9.97e-07,78;UBERON:0007798,9.97e-07,78 | |||
|phase1_expression=14.7159487209151,13.9165340529139,23.3984310799312,25.0183245882826,23.241976910219,20.9361245784089,12.6649939084155,7.58063848112197,7.83556884599516,21.1331185391298,30.7032513907868,60.2898187079275,49.8519588851777,16.9559903555264,18.8896504164912,10.0848771967766,10.2458069764076,15.3365118981348,13.6621183661342,38.290649061881,25.0920850230431,19.7476474531195,18.0328671892566,12.4555726816325,13.9352329950231,2.67446920117829,3.11982239909794,2.91229890860613,0.393364276848904,2.30297638858328,0.619264493264304,13.7913183671839,9.33738348212575,3.32778609150109,16.6554481247648,6.11327699695913,4.40400659002271,0.553995408531877,0.601633342410425,0.651032612147555,14.3305903513552,18.7858326291008,14.6818073551486,0.581592955118259,0.755751887377619,0.485168122375632,0.697287110717054,0.411167888021826,0.309706370895104,0.28769239232215,0,0.709446689665756,0.689491361473237,0,0,0.188242339542605,1.09162460023138,0,0.612167784741805,0.641858054152187,0.639337125799041,0,0.199463657621632,0,1.16083695451434,0.56738522469114,0,0.75374599577023,0,0,1.81619850790011,0,0,0,0,0,0.44931452458598,0.750884464207532,0.16072558669708,0,0,0,3.51992488922645,0.546138611262131,1.77901850772711,2.13365111283254,2.00197993518006,0.574752439954483,2.64417949113945,2.86216126360609,0,0,0.764546456250458,1.32171328579026,0.560508562981536,4.74091352595139,0.786839080455332,0.786021525498329,1.23360899399706,1.67186495390678,1.62961133316795,0,1.94826728407911,5.45911238737351,0.589211814949674,1.55073726208535,1.89562704635511,5.37983542847836,4.03183977435623,4.76869923350661,4.42160028457357,3.76744011455568,1.18629250529648,0.802622484269139,1.04535523804977,5.66546713487831,3.06576394881537,1.03088233644789,0.759059076058509,1.59282707162048,1.30216690771284,1.90090408889675,2.40920190524436,1.91979916731628,2.49861453104692,1.4206635122641,0.821127996921047,1.41124720257313,0.802320587350522,1.15859523106239,2.43806866313962,16.7675214925909,6.77671577770711,28.5536930383807,10.5280961233537,13.9052658202391,33.4020097761462,18.4921250715002,8.88627281342238,6.20842312895179,7.64162635530197,7.59678637886733,14.5718115317017,9.64039551239516,2.92092654289215,3.83085422058388,6.78085598646212,1.19245312152671,1.14398982156026,1.85728750664782,9.14307073886843,6.02164216574287,14.579901067519,3.95715559346807,20.9749718104953,12.105193845363,14.8386426241136,7.75250277507987,15.6537155582153,13.3888245105868,23.3641003923305,4.56163263431108,9.76248230192678,14.7065232138347,9.72170337458112,11.6089646769304,6.28682243353275,6.30624290706604,16.8648301212472,11.3911879148175,6.04565754970344,0,0,7.41359888642308,9.93943903390637,15.9554444697371,25.2901535353248,65.1119129099807,21.9894396962981,12.3349072031308,5.33744978648525,22.6934144543787,17.7390290177867,12.1239604862719,13.7307998615305,18.6169636003266,10.37116664064,17.5741073875347,10.6134426122309,12.5503800739779,2.98897361103602,6.3414629267633,9.2267578289835,9.2697532423484,12.6575586178034,7.37005903870608,11.9857906163888,19.0080457165129,15.083282685992,34.586131753645,28.7447256726495,6.90178067211671,8.88341491090946,14.1302698896933,17.1201272143527,11.0335606487647,18.0285670687916,16.6745309245231,33.3664722381283,14.9490172172997,8.47727604638247,50.715395238264,13.0876712132817,24.4758513043348,18.7978024894906,42.1940830603166,13.3488697070842,23.7287747789468,9.66523935744143,8.08230284094059,56.8015348026583,20.2511717437557,15.5995744925649,11.0158686303079,7.0913991353617,3.72845974005705,0.365921118388786,0.795178609928912,1.74290914304278,2.90250954043037,1.00928340350251,0,20.3384392028761,9.64861407289328,12.4321429217232,13.0023019848954,18.7688665234092,11.2391460037852,11.8009283054671,11.5685294344071,9.81616357318306,10.4582133164355,13.9989665275547,14.4269499731376,12.1657308377715,11.5424147083917,16.2394200017423,4.20725321410337,19.7555525439072,20.5812195939759,5.07020139287323,1.96565443335525,4.13552934676983,12.8024298830249,13.2827513626563,16.8136454092555,7.13376855156066,8.99214026060957,5.02644862058154,3.98130314181677,12.7065239071027,29.1181739878282,8.6598805215164,9.85408442288153,13.149773754412,12.5598809552134,13.4265798647217,7.61016608938393,22.915927540819,26.613071024941,15.7578883895934,22.2304051882276,22.5919366678867,8.43604505880993,10.5828740765282,4.96212840348353,5.55262840757659,3.19697332365358,5.75074018747817,15.7652236126702,14.792136914222,3.7319060797339,2.88239906833923,2.90357596880674,42.9245765415063,105.810793879643,59.780898077124,30.7930402840869,14.293021485762,44.1504295030559,19.1503709862487,17.4924491578763,11.7709218584986,15.8410697373252,28.6983208982267,17.8828222925941,6.762422020448,25.5300591921476,23.9217104896142,24.4347005549035,17.0218958427934,16.7845972780143,7.14889968290738,8.68194568626309,4.93944202068461,11.4007664502807,4.97548728239564,13.4631818398683,36.1727252471503,25.2744702994085,11.0970020212083,15.8110914833548,26.1173687544706,12.6500363689819,19.1699884393266,19.5265290917994,5.70547620162874,12.8855362934145,8.6300055471161,31.8728514567014,17.4852824629903,1.77327684181734,1.50939302401662,1.41177339907723,14.4833935806804,14.3153839243384,3.09315525111078,10.8885572467327,3.18969375826582,0,0,0,13.127989613948,23.0078439687451,7.32415563989286,9.56665963041713,8.92144943985809,17.5049680687668,5.97421216462837,21.9690652801235,50.0296508923167,34.1461135265266,13.2845119707087,6.0841825618762,15.725934218723,24.2793435253798,13.3825935286234,1.03384013061444,0.431428401637234,0.853820462427555,15.156378572313,81.5533653601436,36.2868351995616,20.5929480489585,32.5339383370692,24.6980883101105,28.8313085825327,42.9834089216031,14.6377068240683,17.8101679733989,8.17311377154074,7.63515418846446,17.657338542969,12.9813607295905,9.06440951987682,10.2730532152879,8.42127175273796,4.41988746892302,18.4851261545017,23.3076695048598,17.9640448494411,13.5359883872224,9.01079444121653,11.7652465376528,8.76835347919564,5.38313307353666,26.1586783363062,21.0916194542879,10.795795805107,13.880452742126,20.0500363782451,17.057452311065,10.1950509218015,9.14183609821597,12.3131115097198,0.877039506583738,0,19.746659633962,25.9131570102768,16.5942981278795,8.86152700170411,29.0275203474149,42.4098829591822,18.3764972158775,9.1008434445113,16.068392984416,11.9871690682231,12.1698407520569,10.8987609055552,9.37288692894808,10.5271839970908,8.41096824702525,9.5453822706033,11.0399724201954,6.11554186835619,7.30322255987403,10.5918551370505,4.2486267959331,2.32422774648643,40.6107927411526,5.5762981612848,18.7900483907414,23.421465333949,13.9189278732012,15.0112617474175,7.01311945035757,11.9090678195094,24.6775951280606,12.5815927989724,20.2159255135954,11.9822916649498,15.273755900445,5.49464048139461,17.8073733007482,12.6287033678585,13.6662386720996,22.2400729730648,11.0957224821106,11.7952367746915,22.4311519981212,8.52997213709495,12.6780176108107,21.1574862682378,9.33275850894504,13.5609739944291,8.82184549673799,16.5859743810305,17.5380354101505,32.9902054532012,20.3327373134456,9.13096696332168,9.2947049429925,7.60578126837052,12.6201989939565,8.84241369118091,8.56010523555001,22.7047081005183,11.1887046707762,12.8425008254362,13.6610342555657,12.5976499288194,6.63932577806033,4.02181365321472,5.44454924306613,7.34321646058877,3.87454835404107,3.36942951335251,1.7737206141467,2.98640420269047,2.02979043692868,1.52927441428475,1.13929437434833,1.19115887728894,1.64544909234478,1.94541993357815,0.540031437238115,0.79312517629427,2.7774258493143,0.962479855263359,4.90080431962063,10.0333714567888,9.23322963049247,10.0309999121264,10.6815602728311,16.365508457491,4.21311814291207,2.32840940996271,8.11554850686389,7.58152380906339,5.47763229679661,0.783399478865116,0,6.26379577865932,4.65705417800729,5.65039180134933,2.55507742614196,2.40453741329035,19.3561681514329,15.6573275524691,17.0186124546147,8.59707619768977,14.4771210425526,2.46174797895425,7.30230331885154,3.99686361597384,5.63948020351398,7.11134053551235,7.17890078432281,26.8206753066425,5.23783906104148,3.69376990848337,5.72986763370456,11.2846578716403,4.30024982938925,8.94732882989668,8.01815673539923,2.89402633059555,13.019506063914,13.7231515283196,5.57894367102995,2.48655523978033,12.8485701405681,17.7947507553749,2.58478091468246,10.2643063928396,16.1763032065188,0.537063524026827,4.09257896181497,3.55116260292961,2.3948309234694,10.0023291130173,6.78532922266653,6.86483926397699,11.9768278800717,7.55240507147176,7.87139999965761,3.62499787717397,5.68967241427498,13.4754434655166,13.9468732243082,14.4792216761415,4.08246458736556,15.9734995338629,2.65722415744152,8.20055782652774,7.62908681585416,6.63475559587348,7.09314285488514,6.58156191461918,13.2904925493168,2.23077990845765,4.77091602723542,8.43171213267809,6.9169171316418,9.3347950186163,18.1441111109753,16.5880603060598,22.2582151966525,17.0571128325963,8.17546385565892,6.90713128138109,9.64027755020907,3.15833924864053,4.50943828930801,3.18861015254101,3.03605972358696,10.1719410547442,2.3209787098083,0.652931232636591,8.76389042890433,4.9769387140681,4.97630965539252,4.15750553165694,2.4441205797345,9.78519724646052,12.7270857114898,14.5146509812583,14.8956503887296,10.4335094148843,9.37057782901357,3.46664099509765,8.02224937621568,56.3250480519095,3.55125962564451,0,3.36680037793539,3.91756793696625,48.2538176320521,17.1085515805458,2.65861549082874,4.96487933813248,5.65079253133006,0,1.13843818411917,4.85361355545985,3.99187398170801,4.8016274733045,4.61413794876134,5.76598005198699,4.29965081179041,7.25672484668139,5.33552014729155,6.81558293541637,4.36450574197887,1.1473296469895,6.10148000107438,5.48167698587004,11.5254474787734,10.1297273529406,14.861905087845,8.01588202515337,6.40358984218058,8.5918132120316,2.73771792592801,30.2376613878017,43.2419394612151,3.16920555573929,4.47309128035557,2.82832841540154,20.5215351171157,20.8159664161543,17.3396969981747,38.1414778670005,1.80126086612937,4.10716136675979,1.27746588066972,6.87624706271931,8.41239533693806,6.14421282798959,4.81236890424536,0,5.59101201397175,3.86303443322914,1.56220020209311,4.16537529417703,3.24269895188163,2.32991899054908,0,0.0824158583811665,0,0.393709926058995,16.9346664131569,3.97614844904652,6.26535668113248,2.41129722697529,1.92555211236127,1.66176135211674,0,0,13.1219042381333,12.4110834411728,5.04356526714868,7.29118775076474,4.01281278773745,8.96436696664224,15.928961377514,5.71756261098694,1.98627591109629,11.4420841944637,36.3809733174987,26.7908662272393,17.6357174459081,4.7892076624995,2.46277562248017,29.477127768878,7.4785980403283,6.59485051551371,5.30027555648885,5.55916712354667,5.81823447667836,14.2002075443993,4.22889013390003,6.40724475406168,2.67247318669432,4.55662960881915,2.97699613087171,54.7384220357306,10.3523708623762,8.93677760878255,2.72008901684737,4.2617281983859,4.59518365145192,2.62298104567844,4.24046059875633,1.77213635993397,3.90484047686282,6.76031025815099,5.16068276121064,8.31967886526392,15.5861971382872,9.13100990579123,15.247609771377,20.4726308681225,16.8424546791531,4.70531639396343,9.36669811613763,9.70970891692529,9.40305258187307,14.4902252105279,8.3220879225392,26.7058237437876,20.125432140206,21.3554693183169,33.1818099175539,20.4161747080373,17.8752780670198,16.2640664988597,10.3542898656407,15.2933058135626,10.8684069813382,22.3941352234062,7.97525143673985,6.26094074174081,10.8185478477997,12.1857667894015,13.8336049289585,11.6383141889638,9.55953957678147,11.1368102370838,13.5352602157529,13.6009439985472,11.3320582710322,10.1024846629776,5.04739592914604,2.69667762570225,0.214441591374926,1.04397716786085,6.5744718398559,30.3294441364223,11.502625111804,16.8343510616598,3.08801447160972,20.3934166108198,6.00743096215996,1.3503982678964,15.3737620994296,0.512483037175893,1.38172136692479,13.0659781156274,4.83904526531058,1.55888247071511,1.32864840313363,4.74339643341948,4.91414773269619,8.8478247151339,3.38099397373803,4.59971010466339,27.7398497204766,29.4487615219995,6.81019144280203,19.5152307266951,4.89578277018056,5.59869534029676,9.08050036255927,31.4848449278311,3.45985072082972,2.40261204022431,7.29849878802308,10.2035961648808,5.32923786313709,1.11728983594649,6.67809136372179,0.867479195013787,16.8119857139949,10.5802783107205,17.4559922091324,13.2954495949671,4.25089728976755,3.03304332208587,11.8967491259638,2.52071696221718,12.379148191095,10.6573926117022,4.28308260777463,18.7462142336959,4.01097059382317,0.733714394086716,4.15892398141218,18.306340582424,0,27.8482710962785,4.81346101435246,16.3381105649851,3.12605604493237,7.33338744547983,11.4640342257068,7.68851648328635,8.98249875424649,3.90539049306924,4.75379631952723,12.1124197470362,4.37579847214576,3.28954660114309,2.48105589194647,10.0246609284984,14.5649167509139,2.67850917939143,6.05310699993883,12.7462776889693,25.7258276226966,21.8207830600092,5.5312314026774,4.80166426424772,12.0306427368992,10.7209620907444,16.5471377237555,8.56481794568932,4.86657175673187,6.75597036638808,7.00680408284473,7.30526976407596,6.47782773655864,3.8220135030964,17.4402767791041,8.21670781010178,5.81207126840626,10.2576380658522,0.801711364730253,2.90102629828252,1.19502933965765,1.38251932362818,8.60454717640555,38.931228240356,37.0678310702336,11.4314503551551,4.1239236337929,2.48165108531456,5.7332336338646,7.15874763505871,6.57606565222128,1.21917924982269,0.647428837187895,3.2852098193999,4.6392577253528,1.94284397223656,10.5272758557948,3.58111395290463,22.0002167938502,7.00265708641552,1.75904826792687,46.7984815056688,3.47283711485751,1.96703604453562,2.82190377816914,2.94177986104687,5.4205605833374,4.51509474364374,4.45569600490629,5.0718687310008,8.66628284907866,3.28943712929488,4.12530483030894,5.79658704364588,7.1421575442263,7.41079230602953,2.00603416722921,0,3.21110498383179,4.01350832824064,2.36657343289777,14.6181703910467,3.9271562130634,2.1161073620616,13.7638156721698,15.2517957448368,11.2482906152185,1.13549782351571,17.1546947983002,20.2717601618299,2.34574308406558,1.60330443159336,1.92979289023174,1.50424523575425,6.44118934855035,2.94760543171796,2.48750831837634,4.75791780964718,4.05144565611864,6.66580408098473,3.48780113114433,5.77294842951479,9.41907645677153,6.81024593576364,8.89315631416165,1.95945073107265,4.10679961302337,5.32081218815241,3.9447212965972,4.65724499164419,9.19856935304012,39.0622085912439,0,7.00636576431378,2.34640942403454,7.94569387188632,4.06896178315738,0.665756774185513,5.03184483977566,1.28227396921293 | |||
|short_description=p2@GBA | |||
}} |
Latest revision as of 12:00, 17 September 2015
Short description: | p2@GBA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_GBA_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000473570, ENST00000493842_5end |
EntrezGene: | GBA |
HGNC: | 4177 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.11e-13 | 76 |
mesodermal cell | 3.67e-09 | 121 |
embryonic cell | 1.91e-08 | 250 |
migratory neural crest cell | 4.57e-08 | 41 |
muscle precursor cell | 6.17e-07 | 58 |
myoblast | 6.17e-07 | 58 |
multi-potent skeletal muscle stem cell | 6.17e-07 | 58 |
smooth muscle cell | 9.91e-07 | 43 |
smooth muscle myoblast | 9.91e-07 | 43 |
Ontology term | p-value | n |
---|---|---|
cell layer | 1.70e-08 | 309 |
epithelium | 4.71e-08 | 306 |
epithelial vesicle | 8.27e-08 | 78 |
vasculature | 9.97e-07 | 78 |
vascular system | 9.97e-07 | 78 |