FFCP PHASE1:Hg19::chr6:28367544..28367555,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9753 | |EntrezGene=9753 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13172 | |HGNC=13172 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_NM_001163391,NR_028077,uc010jre.2,uc011dlh.1_5end | |association_with_transcript=0bp_to_NM_001163391,NR_028077,uc010jre.2,uc011dlh.1_5end | ||
|cluster_id=chr6:28367544..28367555,- | |||
|description=CAGE_peak_3_at_ZSCAN12_5end | |description=CAGE_peak_3_at_ZSCAN12_5end | ||
|id=chr6:28367544..28367555,- | |id=chr6:28367544..28367555,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002591;1.85e-12;1 | |ontology_enrichment_celltype_v019=CL:0002591;1.85e-12;1 | ||
|ontology_enrichment_celltype_v019_2=CL:0002591,2.20e-12,1 | |||
|ontology_enrichment_development_v019=UBERON:0006965;7.39e-07;2 | |ontology_enrichment_development_v019=UBERON:0006965;7.39e-07;2 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005743!9.84e-07!86 | |ontology_enrichment_uberon=UBERON:0005743!9.84e-07!86 | ||
|ontology_enrichment_uberon_v019=UBERON:0000966;7.75e-10;5!UBERON:0005388;7.75e-10;5!UBERON:0001802;7.75e-10;5!UBERON:0007625;1.14e-09;11!UBERON:0000019;1.36e-09;19!UBERON:0000047;1.36e-09;19!UBERON:0004088;1.36e-09;19!UBERON:0010230;1.36e-09;19!UBERON:0000970;4.02e-09;20!UBERON:0002104;1.07e-08;21!UBERON:0001456;1.07e-08;21!UBERON:0000020;5.90e-08;23!UBERON:0001032;1.24e-07;24!UBERON:0004456;1.24e-07;24!UBERON:0001905;7.39e-07;2!UBERON:0002757;7.39e-07;2!UBERON:0010134;7.39e-07;2!UBERON:0000078;7.39e-07;2!UBERON:0005408;7.39e-07;2!UBERON:0002012;7.39e-07;2!UBERON:0001899;7.39e-07;2!UBERON:0008886;7.39e-07;2 | |ontology_enrichment_uberon_v019=UBERON:0000966;7.75e-10;5!UBERON:0005388;7.75e-10;5!UBERON:0001802;7.75e-10;5!UBERON:0007625;1.14e-09;11!UBERON:0000019;1.36e-09;19!UBERON:0000047;1.36e-09;19!UBERON:0004088;1.36e-09;19!UBERON:0010230;1.36e-09;19!UBERON:0000970;4.02e-09;20!UBERON:0002104;1.07e-08;21!UBERON:0001456;1.07e-08;21!UBERON:0000020;5.90e-08;23!UBERON:0001032;1.24e-07;24!UBERON:0004456;1.24e-07;24!UBERON:0001905;7.39e-07;2!UBERON:0002757;7.39e-07;2!UBERON:0010134;7.39e-07;2!UBERON:0000078;7.39e-07;2!UBERON:0005408;7.39e-07;2!UBERON:0002012;7.39e-07;2!UBERON:0001899;7.39e-07;2!UBERON:0008886;7.39e-07;2 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0007625,8.34e-10,11;UBERON:0000019,2.98e-09,20;UBERON:0000047,2.98e-09,20;UBERON:0010312,2.98e-09,20;UBERON:0004088,2.98e-09,20;UBERON:0010230,2.98e-09,20;UBERON:0003072,2.98e-09,20;UBERON:0004128,2.98e-09,20;UBERON:0003071,2.98e-09,20;UBERON:0000970,8.06e-09,21;UBERON:0002104,8.06e-09,21;UBERON:0000966,1.80e-08,6;UBERON:0005388,1.80e-08,6;UBERON:0001802,1.80e-08,6;UBERON:0001456,1.99e-08,22;UBERON:0000020,9.73e-08,24;UBERON:0001032,9.73e-08,24;UBERON:0004456,9.73e-08,24;UBERON:0000078,8.06e-07,2;UBERON:0007497,8.06e-07,2;UBERON:0003643,8.06e-07,2;UBERON:0003504,8.06e-07,2;UBERON:0003469,8.06e-07,2;UBERON:0003496,8.06e-07,2;UBERON:0002012,8.06e-07,2;UBERON:0008886,8.06e-07,2;UBERON:0007303,8.06e-07,2;UBERON:0002061,8.06e-07,2;UBERON:0005432,8.06e-07,2;UBERON:0004363,8.06e-07,2 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0.140954404095971,0,0,0,0,0,0,0,0,0,0.263766978228454,0.247532705920093,0.662794751455832,0,0,0,0,0.246242116153576,0,0,0.572471974262113,0.958120975510189,0.251085279189606,0.229240217243854,0.246301768349837,0.314843125254717,0,0,0,0,0,0.369754010166788,0.0774672005803016,0.142169232487422,0.293600439334847,0.553995408531877,0,0,0.223915474239924,0.32389366601898,0.515151135268373,0,0,0,0.232429036905685,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0.211255286311942,0,0.209658645508376,0.22465726229299,0,0.32145117339416,0,0.19891667719909,0,0,0,0,0.426730222566507,0,0.574752439954483,0,0,0,0.587237189370939,0.764546456250458,0,0,0.263384084775077,0.196709770113833,0,0,0,0.32592226663359,0.473447805734733,0,0,0,0.221533894583621,0,0.128091319725675,0.130059347559878,0.164437904603676,0,0,0.444859689486181,0.267540828089713,0,0.226618685395132,0.383220493601921,0,0.253019692019503,0.318565414324097,0,0.950452044448374,0.150575119077773,0.255973222308837,0,0.710331756132051,0,0.403213486449465,0,0.289648807765598,0,0,0.255725123687061,0,0,0.144846518960824,0,0,1.13441780596881,0.665188192387692,0.43917392846563,0.261958150995425,0,0,0,0.174129737299267,0,0,1.14398982156026,0.74291500265913,0.39752481473341,0,0,0,0,0,0,0,0.35576626268671,0,0.402829317109147,0,0,0,0,0.17859945656816,0.44905874525234,0.112611480483322,0,0,0,0,0,0,0,0.25326102332916,0,0,0.709336764396714,0,0,0.24666754841716,0.311211035399766,0,0.326923806226917,0.454072282934794,0,0,0,0,0.149448680551801,0.23486899728753,0.161872944368132,0.561803226808994,0.816616685019573,0.368502951935304,0.309977343527296,0,0,0,0,0.168336113954066,0.250237039743928,0.277064115484183,0,0,0.150238058906597,0.226864366320042,0.89694817844431,0.213557388818567,0,0,0,0.257640540045629,0.37223371266318,0,0.292311015483596,0.504867548488229,0.368199594569197,0,0.710019185033229,0.10075209822764,0.169560592310488,0,0,0.573609190778008,0.121973706129595,0.530119073285941,0.348581828608555,0.518305275076852,0.252320850875628,0.72995471815166,0,0,0,0,0,0.118306800039844,0.337169380156203,0,0.110293972732394,0.217879444092406,0.237270619111097,0,0.196221465125346,0.38474715694639,0,0,0,0,0,0,0,0,0,0.343135620597051,0.109750285408626,0,0,0.277765335475589,0.651616610620649,0,1.44331342025273,0.34779121492523,0.352226082707465,0.288732895522148,0,0,0,0,0.246217006087397,0,0.297262324577456,0,0,0,0,0,0,0,0.44024217006613,0.829312462163088,0.864719720501769,0.25248486685276,0.190493682876507,0.763976851116555,0,0,0.102827492703324,0.300343057843917,0,0,0.87192013766656,0.36669142910475,0.129271715757778,0,0,0,1.04007436911366,0,0,0,0,0,0,0,0.355391948742546,0,0.301439377059586,0,0.299918973546171,0,0.502257091432126,0,0.239624855491583,1.14861935834114,0,0.144781306667579,0.205476322550383,0,0.112085143993527,0.197030760201927,0,0.513372145118994,0.508189248444927,0,0,0.167516265334349,0,0,0,0,0.12269149171914,0.500170521059677,0.542530047399471,0.415941723061614,0.713715955188647,0,0.117141414992713,0,0,0,0,0,0.0868836144680828,0.587403472388222,0,0,0.215714200818617,0.106727557803444,0.303127571446259,1.66435439510497,0,0.248107807818777,0.153461973288062,0.280660094433074,0.128139149255701,0,0.321707842287215,0,0,0,0,0,0.232420756919918,0,0,0.276242966807689,0,0.364182336013434,0.131124414959424,0,0.0770153371044148,0,0,0.422206515571503,0,0.170093705276516,0,0,0.270946437543853,0,0,0,0.223874754722178,0.219259876645935,0.522870902049801,1.28225062558195,0.328014645699706,0,0.309123034943167,0.27470839445503,0.165018999841176,0,0.650060246036521,0,0.193341436584244,0,0.15350367472613,0.413509717453592,0.644521469209642,0.290033387828457,0.596586391912706,0.178064071293475,0.330569830721956,0,0.255225424989168,0.10115778085555,0.464845549297286,0,0,0.616067160352178,0,0,0.18532421910392,0.143124886741991,0.744316738719335,0.316379424718726,0,0,0.42793898803392,0,0,0.179872457583315,0.274537029736055,0,0.202182481573316,0,0,0,0,0,0.136499911407986,0,1.13008116620243,0,0,0,0,0,0,0.30982349809975,0.281695602532241,0.143411352204052,0.0982490410131212,0,0,0,0,0,0,0.192444225451024,0,0,0.188287601553558,0,0,0,0.918893600827838,0,0,0,0,0.411362273086194,0,1.08006287447623,0,0.320472213382419,0,0,0,0.28853842595289,0.782560276832555,0,0,0.191505370132367,0.211673582723883,0.324621940274555,0.280797178113459,0,0,0,0.169291777801603,0,0.403599414382095,0,0,0,0.223676107892416,0.166849141711909,0,0.278406173895242,0,0.270455678475983,0.33307196799782,0,0,0.586032717087576,0,0,0.284136146806413,0.23874448473769,0.296964680832639,0,0,0.281338832821026,0,0.16480387422676,0,0.19924798825107,0.552567831062295,0,0.409074730008619,0.246169610922139,0,0.269605053441981,0,0,0.197286811273867,0,0,0.969332746095218,0.278304294485554,0,0,0,0,0.1137934482855,0.254253650292766,0,0,0,0,0,0.241192877250816,0,0.110579259931225,0.295547618953547,0.219385397153973,0.32681539055697,0,0.0769502585037971,0,0,0.08975764440977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|phase1_expression=0.181678379270557,0.214100523890983,0.140954404095971,0,0,0,0,0,0,0,0,0,0.263766978228454,0.247532705920093,0.662794751455832,0,0,0,0,0.246242116153576,0,0,0.572471974262113,0.958120975510189,0.251085279189606,0.229240217243854,0.246301768349837,0.314843125254717,0,0,0,0,0,0.369754010166788,0.0774672005803016,0.142169232487422,0.293600439334847,0.553995408531877,0,0,0.223915474239924,0.32389366601898,0.515151135268373,0,0,0,0.232429036905685,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0.211255286311942,0,0.209658645508376,0.22465726229299,0,0.32145117339416,0,0.19891667719909,0,0,0,0,0.426730222566507,0,0.574752439954483,0,0,0,0.587237189370939,0.764546456250458,0,0,0.263384084775077,0.196709770113833,0,0,0,0.32592226663359,0.473447805734733,0,0,0,0.221533894583621,0,0.128091319725675,0.130059347559878,0.164437904603676,0,0,0.444859689486181,0.267540828089713,0,0.226618685395132,0.383220493601921,0,0.253019692019503,0.318565414324097,0,0.950452044448374,0.150575119077773,0.255973222308837,0,0.710331756132051,0,0.403213486449465,0,0.289648807765598,0,0,0.255725123687061,0,0,0.144846518960824,0,0,1.13441780596881,0.665188192387692,0.43917392846563,0.261958150995425,0,0,0,0.174129737299267,0,0,1.14398982156026,0.74291500265913,0.39752481473341,0,0,0,0,0,0,0,0.35576626268671,0,0.402829317109147,0,0,0,0,0.17859945656816,0.44905874525234,0.112611480483322,0,0,0,0,0,0,0,0.25326102332916,0,0,0.709336764396714,0,0,0.24666754841716,0.311211035399766,0,0.326923806226917,0.454072282934794,0,0,0,0,0.149448680551801,0.23486899728753,0.161872944368132,0.561803226808994,0.816616685019573,0.368502951935304,0.309977343527296,0,0,0,0,0.168336113954066,0.250237039743928,0.277064115484183,0,0,0.150238058906597,0.226864366320042,0.89694817844431,0.213557388818567,0,0,0,0.257640540045629,0.37223371266318,0,0.292311015483596,0.504867548488229,0.368199594569197,0,0.710019185033229,0.10075209822764,0.169560592310488,0,0,0.573609190778008,0.121973706129595,0.530119073285941,0.348581828608555,0.518305275076852,0.252320850875628,0.72995471815166,0,0,0,0,0,0.118306800039844,0.337169380156203,0,0.110293972732394,0.217879444092406,0.237270619111097,0,0.196221465125346,0.38474715694639,0,0,0,0,0,0,0,0,0,0.343135620597051,0.109750285408626,0,0,0.277765335475589,0.651616610620649,0,1.44331342025273,0.34779121492523,0.352226082707465,0.288732895522148,0,0,0,0,0.246217006087397,0,0.297262324577456,0,0,0,0,0,0,0,0.44024217006613,0.829312462163088,0.864719720501769,0.25248486685276,0.190493682876507,0.763976851116555,0,0,0.102827492703324,0.300343057843917,0,0,0.87192013766656,0.36669142910475,0.129271715757778,0,0,0,1.04007436911366,0,0,0,0,0,0,0,0.355391948742546,0,0.301439377059586,0,0.299918973546171,0,0.502257091432126,0,0.239624855491583,1.14861935834114,0,0.144781306667579,0.205476322550383,0,0.112085143993527,0.197030760201927,0,0.513372145118994,0.508189248444927,0,0,0.167516265334349,0,0,0,0,0.12269149171914,0.500170521059677,0.542530047399471,0.415941723061614,0.713715955188647,0,0.117141414992713,0,0,0,0,0,0.0868836144680828,0.587403472388222,0,0,0.215714200818617,0.106727557803444,0.303127571446259,1.66435439510497,0,0.248107807818777,0.153461973288062,0.280660094433074,0.128139149255701,0,0.321707842287215,0,0,0,0,0,0.232420756919918,0,0,0.276242966807689,0,0.364182336013434,0.131124414959424,0,0.0770153371044148,0,0,0.422206515571503,0,0.170093705276516,0,0,0.270946437543853,0,0,0,0.223874754722178,0.219259876645935,0.522870902049801,1.28225062558195,0.328014645699706,0,0.309123034943167,0.27470839445503,0.165018999841176,0,0.650060246036521,0,0.193341436584244,0,0.15350367472613,0.413509717453592,0.644521469209642,0.290033387828457,0.596586391912706,0.178064071293475,0.330569830721956,0,0.255225424989168,0.10115778085555,0.464845549297286,0,0,0.616067160352178,0,0,0.18532421910392,0.143124886741991,0.744316738719335,0.316379424718726,0,0,0.42793898803392,0,0,0.179872457583315,0.274537029736055,0,0.202182481573316,0,0,0,0,0,0.136499911407986,0,1.13008116620243,0,0,0,0,0,0,0.30982349809975,0.281695602532241,0.143411352204052,0.0982490410131212,0,0,0,0,0,0,0.192444225451024,0,0,0.188287601553558,0,0,0,0.918893600827838,0,0,0,0,0.411362273086194,0,1.08006287447623,0,0.320472213382419,0,0,0,0.28853842595289,0.782560276832555,0,0,0.191505370132367,0.211673582723883,0.324621940274555,0.280797178113459,0,0,0,0.169291777801603,0,0.403599414382095,0,0,0,0.223676107892416,0.166849141711909,0,0.278406173895242,0,0.270455678475983,0.33307196799782,0,0,0.586032717087576,0,0,0.284136146806413,0.23874448473769,0.296964680832639,0,0,0.281338832821026,0,0.16480387422676,0,0.19924798825107,0.552567831062295,0,0.409074730008619,0.246169610922139,0,0.269605053441981,0,0,0.197286811273867,0,0,0.969332746095218,0.278304294485554,0,0,0,0,0.1137934482855,0.254253650292766,0,0,0,0,0,0.241192877250816,0,0.110579259931225,0.295547618953547,0.219385397153973,0.32681539055697,0,0.0769502585037971,0,0,0.08975764440977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| ||
|short_description=p3@ZSCAN12 | |short_description=p3@ZSCAN12 | ||
}} | }} |
Latest revision as of 12:26, 17 September 2015
Short description: | p3@ZSCAN12 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ZSCAN12_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_NM_001163391, NR_028077, uc010jre.2, uc011dlh.1_5end |
EntrezGene: | ZSCAN12 |
HGNC: | 13172 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the pulmonary artery | 2.20e-12 | 1 |
Ontology term | p-value | n |
---|---|---|
pigment epithelium of eye | 8.34e-10 | 11 |
camera-type eye | 2.98e-09 | 20 |
simple eye | 2.98e-09 | 20 |
immature eye | 2.98e-09 | 20 |
ocular region | 2.98e-09 | 20 |
eyeball of camera-type eye | 2.98e-09 | 20 |
optic cup | 2.98e-09 | 20 |
optic vesicle | 2.98e-09 | 20 |
eye primordium | 2.98e-09 | 20 |
eye | 8.06e-09 | 21 |
visual system | 8.06e-09 | 21 |
retina | 1.80e-08 | 6 |
photoreceptor array | 1.80e-08 | 6 |
posterior segment of eyeball | 1.80e-08 | 6 |
face | 1.99e-08 | 22 |
sense organ | 9.73e-08 | 24 |
sensory system | 9.73e-08 | 24 |
entire sense organ system | 9.73e-08 | 24 |
mixed ectoderm/mesoderm/endoderm-derived structure | 8.06e-07 | 2 |
developing epithelial placode | 8.06e-07 | 2 |
respiratory system arterial blood vessel | 8.06e-07 | 2 |
respiratory system blood vessel | 8.06e-07 | 2 |
respiratory system artery | 8.06e-07 | 2 |
head blood vessel | 8.06e-07 | 2 |
pulmonary artery | 8.06e-07 | 2 |
pulmonary vascular system | 8.06e-07 | 2 |
pharyngeal vasculature | 8.06e-07 | 2 |
truncus arteriosus | 8.06e-07 | 2 |
aortic sac | 8.06e-07 | 2 |
pharyngeal arch artery | 8.06e-07 | 2 |