FFCP PHASE1:Hg19::chr17:73840614..73840645,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr17:73840614..73840645,- to FFCP PHASE1:Hg19::chr17:73840614..73840645,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=201294 | |EntrezGene=201294 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23147 | |HGNC=23147 | ||
|TSSclassifier=strong | |||
|UniProt=Q70J99,B4DTQ6 | |UniProt=Q70J99,B4DTQ6 | ||
|association_with_transcript=152bp_to_ENST00000207549,ENST00000412096,ENST00000448606,NM_199242,uc002jpp.2,uc002jpq.1_5end | |||
|cluster_id=chr17:73840614..73840645,- | |||
|coexpression_cluster_id=C3677 | |||
|description=CAGE_peak_3_at_UNC13D_5end | |||
|id=chr17:73840614..73840645,- | |||
|ontology_enrichment_celltype=CL:0000037!9.41e-30!172;CL:0000566!9.41e-30!172;CL:0002032!4.33e-29!165;CL:0000837!4.33e-29!165;CL:0000988!5.20e-28!182;CL:0000763!4.95e-22!112;CL:0000049!4.95e-22!112;CL:0000738!4.29e-18!140;CL:0002031!3.03e-15!124;CL:0002087!2.05e-14!119;CL:0000766!8.90e-12!76;CL:0000839!1.74e-09!70;CL:0000557!4.13e-09!71;CL:0002194!9.10e-08!63;CL:0000576!9.10e-08!63;CL:0000040!9.10e-08!63;CL:0000559!9.10e-08!63;CL:0002009!2.48e-07!65;CL:0000838!5.76e-07!52;CL:0000542!6.22e-07!53;CL:0000051!6.22e-07!53 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,5.67e-20,168;CL:0000988,2.20e-19,177;CL:0002032,2.20e-19,161;CL:0000837,2.20e-19,161;CL:0000763,1.14e-18,108;CL:0000049,1.14e-18,108;CL:0000738,1.64e-09,136;CL:0000766,8.09e-09,72;CL:0002031,3.14e-07,120;CL:0002087,7.93e-07,115 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1240!1.05e-15!39;DOID:8692!1.57e-13!31;DOID:2531!1.21e-11!51;DOID:0060083!1.21e-11!51;DOID:305!1.56e-07!106 | |||
|ontology_enrichment_disease_v019=DOID:8692;2.57e-16;31!DOID:1240;5.58e-14;39!DOID:2531;5.82e-09;51!DOID:0060083;5.82e-09;51 | |||
|ontology_enrichment_disease_v019_2=DOID:1240,2.80e-18,39;DOID:8692,8.04e-17,31;DOID:2531,8.78e-13,51;DOID:0060083,8.78e-13,51;DOID:162,1.19e-09,235;DOID:305,2.37e-09,106;DOID:14566,7.22e-09,239 | |||
|ontology_enrichment_uberon=UBERON:0002390!7.91e-11!102;UBERON:0003061!7.91e-11!102;UBERON:0002193!1.70e-08!112;UBERON:0005631!1.13e-07!14;UBERON:0000158!1.13e-07!14;UBERON:0002405!5.67e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0000478;1.73e-08;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,8.91e-10,14;UBERON:0000158,8.91e-10,14;UBERON:0002390,5.31e-09,98;UBERON:0003061,5.31e-09,98;UBERON:0000478,1.96e-08,24;UBERON:0003124,1.13e-07,7;UBERON:0002193,3.69e-07,108 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,17.2013755551056,168.170081481355,35.8243850293482,34.8172411261559,0,0,0,0,0,0,0,0,0,0,0,0,4.12632391038937,3.44822475689772,3.93553906568396,2.36018566109342,1.15148819429164,2.32224184974114,0,0,0,0.0774672005803016,0.995184627411951,2.64240395401362,1.66198622559563,1.40381113229099,1.30206522429511,2.23915474239924,5.18229865630367,3.8636335145128,0.872389432677388,1.13362783106643,0.970336244751265,0.929716147622738,0,0.619412741790207,1.43846196161075,1.2808035326455,0.47296445977717,1.03423704220986,1.93645405075148,0,0.752969358170419,0.818718450173537,0,0.918251677112708,0.962787081228281,0.639337125799041,0.329851300186716,1.19678194572979,1.70489900213078,1.16083695451434,0,0,1.50749199154046,1.5644487552606,0.434377689410233,0,0.368277635987565,1.26584954976354,2.11255286311942,1.06302149982522,1.88692780957538,0.898629049171961,2.25265339262259,1.12507910687956,1.99508920618874,1.39241674039363,2.37463399894024,1.75996244461323,3.27683166757279,0.889509253863555,0.853460445133014,0.800791974072025,0.574752439954483,0.661044872784862,0.954053754535364,0,0.587237189370939,0.764546456250458,11.8954195721123,4.48406850385229,2.89722493252585,0.983548850569165,1.17903228824749,1.23360899399706,1.5046784585161,0.977766799900771,0,0,3.23090324967003,0.883817722424512,1.10766947291811,0.812411591295047,1.79327847615945,2.47112760363769,3.94650971048823,2.76350017785848,3.47763702882063,0.741432815810302,0.802622484269139,1.04535523804977,3.39928028092699,1.91610246800961,1.03088233644789,0.506039384039006,1.59282707162048,0.651083453856419,0.950452044448374,1.35517607169996,0.895906278080929,0,2.8413270245282,0.821127996921047,1.41124720257313,2.67440195783507,1.44824403882799,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0.982343066232845,0,0.370784442784429,22.3937701621732,19.3284008402187,20.2096099988675,1.66943437013739,0.571994910780128,1.11437250398869,1.39133685156694,0,2.42998351125316,1.69592382577203,3.77549492588915,0,0.835979866147242,0,0,0,0,0,0.24406205754817,0,0,1.07159673940896,2.46982309888787,0.788280363383256,4.5994991239765,4.74632829784064,0.183201743930407,5.27121669744253,3.87780264148325,2.61656431285521,0,0,0,0,0.354668382198357,1.68203280042692,0,0.74000264525148,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0.272746120590835,0,0,0.132529768321485,0,0,0,0,0,0,0,0,0,4.96888560167344,3.87744787179634,2.89213235860178,4.63234685476055,5.01122721412534,3.55905928666645,4.04493924480493,2.74710051175484,3.46272441251751,6.64339909162183,0,1.2347220339942,5.88034845542168,0,0.982827216677626,0.590789906681404,0,11.6839016615958,0,0,0,0,0.185176890317059,0,0,0,0,0,0,0,0,3.1608175918371,6.00940313466411,3.69325509131096,14.2742601734935,11.4445994962321,0,0.16798212819886,0,0.0895585227028483,0.290633938513962,0.383382679165211,1.97065295158377,6.69168098500518,4.35389042635621,8.07071739134984,7.5745460055828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.25572963234866,0,0,0,0.791951872933429,0,0,0.099972991182057,2.43247561282381,4.01805673145701,8.43335757932127,0,0,0,0,0,0,6.94927892759869,1.97030760201927,1.07813787429759,1.66845947163673,0,0,0,0,0,4.49404214368309,2.99161459204025,4.55857064779639,0,0,0,0,0,0,0,0,0,3.10419213877515,0,0.184369168541703,0,0,0,1.6541442089831,1.50999940573032,1.921096040462,31.525267430411,44.9375686678342,57.7565460259689,0,0,0,0,0,0,0,0,0,0,0,0,0.846016147141356,0,0,0,0,0,8.12159303233341,0.462092022626489,2.35304930753057,0,0.105551628892876,0,0,0.215915916102139,0,0,0.501689773854853,0.254876273045038,0,1.34324852833307,0.657779629937804,0.522870902049801,23.8498616358242,23.9450691360785,11.7136222079149,5.87333766392017,0,0,0,0,0,0,0,0,0,0,0,0,0,1.98341898433174,2.88285101047659,2.16941611240793,1.6185244936888,0,0,0,0,0,0,0,0,0,0.316379424718726,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0.294747123039363,0,0,0,0,0,0,0,0.670302275535787,0,5.64862804660675,22.386279378904,16.8471475667626,26.1623790586639,22.0534464198681,3.55213326462519,3.0585488285695,2.27858874869665,3.57347663186684,2.05681136543097,1.94541993357815,1.62009431171434,0,0.106824071127473,0,2.94048259177238,0.371606350251437,0.577076851905779,11.3826949357463,1.75368900001705,8.78149234304393,2.8725805519855,16.5105394524629,26.6189991025135,5.89674074038263,4.33645890163065,4.0736772900986,0,2.70866844482565,3.37234957717769,4.64139326539409,2.55507742614196,3.77855879231341,2.76516687877612,1.56573275524691,2.16903884225481,6.25241905286529,6.12493582569533,9.84699191581699,13.2523282453232,4.32993558397166,8.45922030527097,0,1.75809815126273,0,6.46371628809375,0,27.2168712600967,27.6177153174354,72.4899256954188,0,0.984685914873589,0,2.96646973608167,0,0.19924798825107,1.10513566212459,0,0.306806047506464,8.24668196589166,0,37.6548391307299,3.75944466818779,15.858743477033,0.295930216910801,2.3948309234694,0,0.969332746095218,0.463840490809256,0,0,0.34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| ||
|short_description=p3@UNC13D | |||
}} | }} |
Latest revision as of 12:43, 17 September 2015
Short description: | p3@UNC13D |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_UNC13D_5end |
Coexpression cluster: | C3677_Alveolar_amniotic_papillotubular_Placental_mucinous_bile_Amniotic |
Association with transcript: | 152bp_to_ENST00000207549, ENST00000412096, ENST00000448606, NM_199242, uc002jpp.2, uc002jpq.1_5end |
EntrezGene: | UNC13D |
HGNC: | 23147 |
UniProt: | Q70J99B4DTQ6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 5.67e-20 | 168 |
hematopoietic cell | 2.20e-19 | 177 |
hematopoietic oligopotent progenitor cell | 2.20e-19 | 161 |
hematopoietic multipotent progenitor cell | 2.20e-19 | 161 |
myeloid cell | 1.14e-18 | 108 |
common myeloid progenitor | 1.14e-18 | 108 |
leukocyte | 1.64e-09 | 136 |
myeloid leukocyte | 8.09e-09 | 72 |
hematopoietic lineage restricted progenitor cell | 3.14e-07 | 120 |
nongranular leukocyte | 7.93e-07 | 115 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 8.91e-10 | 14 |
membranous layer | 8.91e-10 | 14 |
hematopoietic system | 5.31e-09 | 98 |
blood island | 5.31e-09 | 98 |
extraembryonic structure | 1.96e-08 | 24 |
chorion | 1.13e-07 | 7 |
hemolymphoid system | 3.69e-07 | 108 |
Ontology term | p-value | n |
---|---|---|
leukemia | 2.80e-18 | 39 |
myeloid leukemia | 8.04e-17 | 31 |
hematologic cancer | 8.78e-13 | 51 |
immune system cancer | 8.78e-13 | 51 |
cancer | 1.19e-09 | 235 |
carcinoma | 2.37e-09 | 106 |
disease of cellular proliferation | 7.22e-09 | 239 |