FFCP PHASE1:Hg19::chr7:16505162..16505173,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr7:16505162..16505173,-
|short_description=p5@SOSTDC1
|description=CAGE_peak_5_at_SOSTDC1_5end
|association_with_transcript=119bp_to_AB059270_5end
|EntrezGen...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=25928 | |EntrezGene=25928 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21748 | |HGNC=21748 | ||
|TSSclassifier=strong | |||
|UniProt=Q6X4U4 | |UniProt=Q6X4U4 | ||
|association_with_transcript=119bp_to_AB059270_5end | |||
|cluster_id=chr7:16505162..16505173,- | |||
|coexpression_cluster_id=C70 | |||
|description=CAGE_peak_5_at_SOSTDC1_5end | |||
|id=chr7:16505162..16505173,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0008801;1.46e-50;1!UBERON:0006298;3.10e-50;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:5409;1.29e-13;4!DOID:1325;2.35e-08;7!DOID:3904;2.35e-08;7!DOID:3905;8.85e-07;9 | |||
|ontology_enrichment_disease_v019_2=DOID:5409,1.29e-13,4;DOID:1325,2.35e-08,7;DOID:3904,2.35e-08,7;DOID:3905,8.85e-07,9 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.01e-08!115;UBERON:0000166!1.78e-08!21;UBERON:0001829!6.90e-08!2;UBERON:0003127!3.44e-07!2;UBERON:0000153!6.16e-07!129;UBERON:0007811!6.16e-07!129;UBERON:0000161!7.10e-07!35;UBERON:0000033!9.83e-07!123 | |||
|ontology_enrichment_uberon_v019=UBERON:0001829;7.30e-99;2!UBERON:0001044;2.58e-74;6!UBERON:0003293;2.58e-74;6!UBERON:0003294;2.58e-74;6!UBERON:0010047;2.58e-74;6!UBERON:0003408;2.58e-74;6!UBERON:0000167;2.58e-74;6!UBERON:0001831;1.46e-50;1!UBERON:0001567;1.46e-50;1!UBERON:0001736;3.10e-50;1!UBERON:0001041;1.46e-32;14!UBERON:0004089;4.32e-26;2!UBERON:0000161;2.73e-24;19!UBERON:0000166;2.73e-24;19!UBERON:0000165;8.05e-17;28!UBERON:0002365;5.87e-15;31!UBERON:0002330;5.87e-15;31!UBERON:0004921;1.57e-12;33!UBERON:0007811;1.88e-08;52!UBERON:0001004;6.75e-08;65!UBERON:0000153;7.86e-08;54!UBERON:0000033;8.96e-08;50!UBERON:0001555;3.68e-07;54!UBERON:0001444;3.72e-07;48!UBERON:0002530;7.35e-07;57 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001829,5.68e-99,2;UBERON:0001044,2.58e-74,6;UBERON:0003293,2.58e-74,6;UBERON:0003294,2.58e-74,6;UBERON:0010047,2.58e-74,6;UBERON:0000167,2.58e-74,6;UBERON:0001831,1.46e-50,1;UBERON:0001567,1.46e-50,1;UBERON:0008801,1.46e-50,1;UBERON:0001736,2.42e-50,1;UBERON:0006298,2.42e-50,1;UBERON:0003408,4.18e-45,10;UBERON:0004089,4.32e-26,2;UBERON:0000166,3.99e-21,22;UBERON:0000165,2.82e-16,29;UBERON:0000930,2.82e-16,29;UBERON:0002365,2.73e-15,31;UBERON:0002330,2.73e-15,31;UBERON:0000161,2.66e-13,36;UBERON:0001004,1.50e-11,74;UBERON:0001444,5.14e-10,49;UBERON:0001041,5.98e-10,87;UBERON:0000033,7.15e-09,56;UBERON:0002530,1.83e-08,59;UBERON:0002553,3.25e-08,61;UBERON:0000153,4.28e-08,62;UBERON:0007811,4.28e-08,62;UBERON:0004921,1.75e-07,118 | |||
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| ||
|short_description=p5@SOSTDC1 | |||
}} | }} |
Latest revision as of 12:54, 17 September 2015
Short description: | p5@SOSTDC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_SOSTDC1_5end |
Coexpression cluster: | C70_parotid_submaxillary_salivary_throat_trachea_aorta_tongue |
Association with transcript: | 119bp_to_AB059270_5end |
EntrezGene: | SOSTDC1 |
HGNC: | 21748 |
UniProt: | Q6X4U4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
major salivary gland | 5.68e-99 | 2 |
saliva-secreting gland | 2.58e-74 | 6 |
gland of oral region | 2.58e-74 | 6 |
gland of foregut | 2.58e-74 | 6 |
oral gland | 2.58e-74 | 6 |
oral cavity | 2.58e-74 | 6 |
parotid gland | 1.46e-50 | 1 |
cheek | 1.46e-50 | 1 |
parotid gland primordium | 1.46e-50 | 1 |
submandibular gland | 2.42e-50 | 1 |
submandibular gland primordium | 2.42e-50 | 1 |
gland of gut | 4.18e-45 | 10 |
midface | 4.32e-26 | 2 |
oral opening | 3.99e-21 | 22 |
mouth | 2.82e-16 | 29 |
stomodeum | 2.82e-16 | 29 |
exocrine gland | 2.73e-15 | 31 |
exocrine system | 2.73e-15 | 31 |
orifice | 2.66e-13 | 36 |
respiratory system | 1.50e-11 | 74 |
subdivision of head | 5.14e-10 | 49 |
foregut | 5.98e-10 | 87 |
head | 7.15e-09 | 56 |
gland | 1.83e-08 | 59 |
anatomical cavity | 3.25e-08 | 61 |
anterior region of body | 4.28e-08 | 62 |
craniocervical region | 4.28e-08 | 62 |
subdivision of digestive tract | 1.75e-07 | 118 |
Ontology term | p-value | n |
---|---|---|
lung small cell carcinoma | 1.29e-13 | 4 |
bronchus cancer | 2.35e-08 | 7 |
bronchogenic carcinoma | 2.35e-08 | 7 |
lung carcinoma | 8.85e-07 | 9 |