FFCP PHASE1:Hg19::chr16:68406171..68406196,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr16:68406171..68406196,- to FFCP PHASE1:Hg19::chr16:68406171..68406196,-: NSchange) |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=55512 | |EntrezGene=55512 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14240 | |HGNC=14240 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=93bp_to_uc010cfe.2,uc010vlh.1_5end | |||
|cluster_id=chr16:68406171..68406196,- | |||
|description=CAGE_peak_4_at_SMPD3_5end | |||
|id=chr16:68406171..68406196,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002174;3.63e-11;1!CL:0000501;3.63e-11;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002174,4.91e-11,1;CL:0000501,4.91e-11,1 | |||
|ontology_enrichment_development_v019=UBERON:0006242;3.63e-11;1!UBERON:0004874;3.63e-11;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002780!3.30e-32!41;UBERON:0001890!3.30e-32!41;UBERON:0006240!3.30e-32!41;UBERON:0003080!3.19e-31!42;UBERON:0007023!3.33e-31!115;UBERON:0001049!1.66e-30!57;UBERON:0005068!1.66e-30!57;UBERON:0006241!1.66e-30!57;UBERON:0007135!1.66e-30!57;UBERON:0001017!1.12e-27!82;UBERON:0001869!2.84e-27!32;UBERON:0001893!3.12e-27!34;UBERON:0002616!3.16e-27!59;UBERON:0005743!3.56e-27!86;UBERON:0002619!1.90e-26!22;UBERON:0002791!3.87e-26!33;UBERON:0000073!1.40e-24!94;UBERON:0001016!1.40e-24!94;UBERON:0000955!1.62e-24!69;UBERON:0006238!1.62e-24!69;UBERON:0001950!1.28e-23!20;UBERON:0002020!2.90e-23!34;UBERON:0003528!2.90e-23!34;UBERON:0000956!1.16e-22!25;UBERON:0000203!1.16e-22!25;UBERON:0003075!3.80e-20!86;UBERON:0007284!3.80e-20!86;UBERON:0003056!5.21e-20!61;UBERON:0002346!9.67e-19!90;UBERON:0000153!2.23e-16!129;UBERON:0007811!2.23e-16!129;UBERON:0000033!4.67e-14!123;UBERON:0001871!5.08e-14!7;UBERON:0004121!5.22e-13!169;UBERON:0000924!2.13e-12!173;UBERON:0006601!2.13e-12!173;UBERON:0000349!8.44e-09!5;UBERON:0000369!1.08e-07!4;UBERON:0002435!1.08e-07!4;UBERON:0000204!1.08e-07!4;UBERON:0010082!1.08e-07!4;UBERON:0002420!6.99e-07!9;UBERON:0007245!6.99e-07!9;UBERON:0010009!6.99e-07!9;UBERON:0010011!6.99e-07!9;UBERON:0000454!6.99e-07!9;UBERON:0000200!9.15e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0002108;1.41e-32;4!UBERON:0002114;1.23e-14;2!UBERON:0000160;6.85e-14;17!UBERON:0000989;3.63e-11;1!UBERON:0008811;3.63e-11;1!UBERON:0002619;7.24e-11;22!UBERON:0005409;7.55e-11;22!UBERON:0002791;2.09e-10;32!UBERON:0001869;2.45e-10;32!UBERON:0000922;3.10e-10;49!UBERON:0003528;9.98e-10;34!UBERON:0002020;9.98e-10;34!UBERON:0000956;1.34e-09;25!UBERON:0000203;1.34e-09;25!UBERON:0001893;1.97e-08;34!UBERON:0001950;5.95e-08;20!UBERON:0002780;2.44e-07;41!UBERON:0001890;2.44e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002108,1.66e-32,4;UBERON:0002114,1.32e-14,2;UBERON:0000160,7.24e-14,17;UBERON:0000989,3.28e-11,1;UBERON:0008811,3.28e-11,1;UBERON:0006258,3.28e-11,1;UBERON:0005876,3.28e-11,1;UBERON:0004874,3.28e-11,1;UBERON:0002619,7.40e-11,22;UBERON:0002791,1.34e-10,32;UBERON:0001869,1.34e-10,32;UBERON:0003528,5.71e-10,34;UBERON:0002020,5.71e-10,34;UBERON:0001893,5.71e-10,34;UBERON:0000956,1.37e-09,25;UBERON:0000203,1.37e-09,25;UBERON:0005409,1.45e-09,25;UBERON:0002780,3.10e-08,41;UBERON:0001890,3.10e-08,41;UBERON:0003080,3.10e-08,41;UBERON:0006240,3.10e-08,41;UBERON:0001950,6.40e-08,20;UBERON:0001017,9.04e-07,81 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223915474239924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188242339542605,0,0,0,0.320929027076094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294605907474837,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207322110030741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245976877086227,0,0.109750285408626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30139853857622,0,0.837581326671744,0,0.749007023947182,8.97484377612075,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.362578348774867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.54941678891006,0.577566499444116,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.507447609232169,0,1.13929437434833,0,0,0.648473311192717,0,0.79312517629427,0,0,0,0.185803175125719,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.561421621224659,0,0,0,0,0,0,0,0.994147647766298,0.422008249231538,0,0,0,0,0.828851746593443,0.251932747854276,0,0.123084805461069,0.311039587661807,0,0,0,0,0,0,0,0.371072392647405,1.99613798001194,0,0,0,0,0,0,0,0,0.347249989866585,2.65722415744152,0.723578631752448,0,0.110579259931225,0.591095237907095,0.438770794307945,0,0,0,0,0,0.179515288819544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,1.41532103205343,0.611030144933625,0,0,0,0.067401132980677,0,0.702793337176017,0,0,0,0,1.20990716048664,3.0607276163049,0,0,0,0,0,0,0,0,0.138674673013139,0,0,0,0,0,0,0,0,0,0,0.451961481561065,0,0,0.253243183823515,0,0,1.49417096317547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.28929632425987,0,0,0,0,0,0,0,0,0,0,0,0,0.0674035438541849,0,0,1.59045937961861,0.136203406111576,0,0.137539436597234,0.415440338029185,0,0,0.182248669974074,0,0,0,0,0,0.191915197319445,0,0,0,0,0,0.326587360109409,0,0,0,0,0.293104467356165,0,0,0,0,0,0.533937062838473,0,0.414239055347196,0,0,0,0,0,0,0,0,0.785270481251171,0,0.732157589411779,0.250381861413,0,0.110929051536852,0.0620964029413835,0,0,0,0,0,0,0.579684114443301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0.308801447160972,0.877136198314828,0,0,0,0,0,0,0.276516872303462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107824811396682,0,0,0,0,0,0,0,0,0,0,0.3062454773532,0.192687675289379,0,0.159633859057151,0.82046545696302,5.04143392443436,0.691572524642179,0.322951291263702,0,0,0,0,0,0,0,1.5913297769302,0,0,0,0,0,0,0.135075169236789,0,0.620060389503552,0.19024743058172,3.82882366312754,0,1.48863353516788,0,0,0,0,0.606965604236632,0.91064876540519,0,0,0,0.135939465953663,0.263091094251396,0,0,0.078493092850514,0.471346769748006,0,0,0,0,0.142953088353313,0,0,0,0,0,0.3414369541879,0,0,0,0,0,0,0,0,0,0.098150233615243,0.121917924982269,0,0,0,0.485710993059139,0.233939463462106,0.198950775161368,0,0,0,0.150962843566674,3.55001127296545,1.31135736302374,2.35158648180761,0,0,0,0,0.4226557275834,0,0,0,0.0999411559249289,0,0,0,0.730336388246517,0,0,0,0.679914901909147,6.10890966476528,2.1161073620616,0,0,0,0,0,0,0.203977659483963,0,0.0918948995348449,0,0.378893491091197,0.267964130156178,0.829169439458779,0.103432995861895,0.426467963801962,0.476128862927481,0.129177819672012,0.124149428591716,0,0,0.202117188958219,0.217716747896961,0,0.134704106029175,0.573777643141411,0.332660356546013,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223915474239924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188242339542605,0,0,0,0.320929027076094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294605907474837,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207322110030741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245976877086227,0,0.109750285408626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30139853857622,0,0.837581326671744,0,0.749007023947182,8.97484377612075,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.362578348774867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.54941678891006,0.577566499444116,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.507447609232169,0,1.13929437434833,0,0,0.648473311192717,0,0.79312517629427,0,0,0,0.185803175125719,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.561421621224659,0,0,0,0,0,0,0,0.994147647766298,0.422008249231538,0,0,0,0,0.828851746593443,0.251932747854276,0,0.123084805461069,0.311039587661807,0,0,0,0,0,0,0,0.371072392647405,1.99613798001194,0,0,0,0,0,0,0,0,0.347249989866585,2.65722415744152,0.723578631752448,0,0.110579259931225,0.591095237907095,0.438770794307945,0,0,0,0,0,0.179515288819544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,1.41532103205343,0.611030144933625,0,0,0,0.067401132980677,0,0.702793337176017,0,0,0,0,1.20990716048664,3.0607276163049,0,0,0,0,0,0,0,0,0.138674673013139,0,0,0,0,0,0,0,0,0,0,0.451961481561065,0,0,0.253243183823515,0,0,1.49417096317547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.28929632425987,0,0,0,0,0,0,0,0,0,0,0,0,0.0674035438541849,0,0,1.59045937961861,0.136203406111576,0,0.137539436597234,0.415440338029185,0,0,0.182248669974074,0,0,0,0,0,0.191915197319445,0,0,0,0,0,0.326587360109409,0,0,0,0,0.293104467356165,0,0,0,0,0,0.533937062838473,0,0.414239055347196,0,0,0,0,0,0,0,0,0.785270481251171,0,0.732157589411779,0.250381861413,0,0.110929051536852,0.0620964029413835,0,0,0,0,0,0,0.579684114443301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0.308801447160972,0.877136198314828,0,0,0,0,0,0,0.276516872303462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107824811396682,0,0,0,0,0,0,0,0,0,0,0.3062454773532,0.192687675289379,0,0.159633859057151,0.82046545696302,5.04143392443436,0.691572524642179,0.322951291263702,0,0,0,0,0,0,0,1.5913297769302,0,0,0,0,0,0,0.135075169236789,0,0.620060389503552,0.19024743058172,3.82882366312754,0,1.48863353516788,0,0,0,0,0.606965604236632,0.91064876540519,0,0,0,0.135939465953663,0.263091094251396,0,0,0.078493092850514,0.471346769748006,0,0,0,0,0.142953088353313,0,0,0,0,0,0.3414369541879,0,0,0,0,0,0,0,0,0,0.098150233615243,0.121917924982269,0,0,0,0.485710993059139,0.233939463462106,0.198950775161368,0,0,0,0.150962843566674,3.55001127296545,1.31135736302374,2.35158648180761,0,0,0,0,0.4226557275834,0,0,0,0.0999411559249289,0,0,0,0.730336388246517,0,0,0,0.679914901909147,6.10890966476528,2.1161073620616,0,0,0,0,0,0,0.203977659483963,0,0.0918948995348449,0,0.378893491091197,0.267964130156178,0.829169439458779,0.103432995861895,0.426467963801962,0.476128862927481,0.129177819672012,0.124149428591716,0,0,0.202117188958219,0.217716747896961,0,0.134704106029175,0.573777643141411,0.332660356546013,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p4@SMPD3 | |||
}} | }} |
Latest revision as of 13:38, 17 September 2015
Short description: | p4@SMPD3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_SMPD3_5end |
Coexpression cluster: | NA |
Association with transcript: | 93bp_to_uc010cfe.2, uc010vlh.1_5end |
EntrezGene: | SMPD3 |
HGNC: | 14240 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
follicular cell of ovary | 4.91e-11 | 1 |
granulosa cell | 4.91e-11 | 1 |
Ontology term | p-value | n |
---|---|---|
small intestine | 1.66e-32 | 4 |
duodenum | 1.32e-14 | 2 |
intestine | 7.24e-14 | 17 |
penis | 3.28e-11 | 1 |
intromittent organ | 3.28e-11 | 1 |
lateral plate mesenchyme | 3.28e-11 | 1 |
undifferentiated genital tubercle | 3.28e-11 | 1 |
somatopleure | 3.28e-11 | 1 |
regional part of cerebral cortex | 7.40e-11 | 22 |
regional part of telencephalon | 1.34e-10 | 32 |
cerebral hemisphere | 1.34e-10 | 32 |
brain grey matter | 5.71e-10 | 34 |
gray matter | 5.71e-10 | 34 |
telencephalon | 5.71e-10 | 34 |
cerebral cortex | 1.37e-09 | 25 |
pallium | 1.37e-09 | 25 |
gastrointestinal system | 1.45e-09 | 25 |
regional part of forebrain | 3.10e-08 | 41 |
forebrain | 3.10e-08 | 41 |
anterior neural tube | 3.10e-08 | 41 |
future forebrain | 3.10e-08 | 41 |
neocortex | 6.40e-08 | 20 |
central nervous system | 9.04e-07 | 81 |