FFCP PHASE1:Hg19::chr11:3013138..3013238,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr11:3013138..3013238,- to FFCP PHASE1:Hg19::chr11:3013138..3013238,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4676 | |EntrezGene=4676 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7640 | |HGNC=7640 | ||
|TSSclassifier=strong | |||
|UniProt=C9J6D1 | |UniProt=C9J6D1 | ||
|association_with_transcript=93bp_to_ENST00000430811_5end | |||
|cluster_id=chr11:3013138..3013238,- | |||
|description=CAGE_peak_4_at_NAP1L4_5end | |||
|id=chr11:3013138..3013238,- | |||
|ontology_enrichment_celltype=CL:0000066!2.29e-29!254;CL:0002321!1.53e-09!248;CL:0000220!2.95e-09!246;CL:0002076!5.95e-09!43;CL:0000223!3.91e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0002076;1.62e-07;42 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,4.29e-29,253;CL:0002321,1.83e-09,250;CL:0002076,2.78e-09,42;CL:0000223,1.15e-07,58 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!1.14e-11!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,1.77e-11,106 | |||
|ontology_enrichment_uberon=UBERON:0000064!6.91e-14!219;UBERON:0004121!2.03e-10!169;UBERON:0000477!2.90e-10!286;UBERON:0000033!4.85e-10!123;UBERON:0000481!2.58e-09!347;UBERON:0000924!4.53e-09!173;UBERON:0006601!4.53e-09!173;UBERON:0000153!5.12e-09!129;UBERON:0007811!5.12e-09!129;UBERON:0001004!1.31e-08!72;UBERON:0004111!5.03e-08!241;UBERON:0000119!5.39e-08!312;UBERON:0000483!2.66e-07!309;UBERON:0000475!3.86e-07!365;UBERON:0005743!4.89e-07!86;UBERON:0001017!5.61e-07!82 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0011216,8.82e-11,223;UBERON:0004121,2.20e-09,171;UBERON:0000924,2.20e-09,171;UBERON:0006601,2.20e-09,171;UBERON:0001004,5.43e-08,74;UBERON:0004111,5.82e-08,240;UBERON:0010371,6.28e-08,104;UBERON:0000119,2.18e-07,309;UBERON:0001017,2.20e-07,81 | |||
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| ||
|short_description=p4@NAP1L4 | |||
}} | }} |
Latest revision as of 13:38, 17 September 2015
Short description: | p4@NAP1L4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_NAP1L4_5end |
Coexpression cluster: | NA |
Association with transcript: | 93bp_to_ENST00000430811_5end |
EntrezGene: | NAP1L4 |
HGNC: | 7640 |
UniProt: | C9J6D1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 4.29e-29 | 253 |
embryonic cell | 1.83e-09 | 250 |
endo-epithelial cell | 2.78e-09 | 42 |
endodermal cell | 1.15e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
organ system subdivision | 8.82e-11 | 223 |
ectoderm-derived structure | 2.20e-09 | 171 |
ectoderm | 2.20e-09 | 171 |
presumptive ectoderm | 2.20e-09 | 171 |
respiratory system | 5.43e-08 | 74 |
anatomical conduit | 5.82e-08 | 240 |
ecto-epithelium | 6.28e-08 | 104 |
cell layer | 2.18e-07 | 309 |
central nervous system | 2.20e-07 | 81 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.77e-11 | 106 |