FFCP PHASE1:Hg19::chr5:2751762..2751784,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr5:2751762..2751784,-
|short_description=p1@IRX2
|description=CAGE_peak_1_at_IRX2_5end
|association_with_transcript=0bp_to_ENST00000302057,ENST00000382611,NM_...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=153572 | |EntrezGene=153572 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14359 | |HGNC=14359 | ||
|TSSclassifier=strong | |||
|UniProt=Q9BZI1 | |UniProt=Q9BZI1 | ||
|association_with_transcript=0bp_to_ENST00000302057,ENST00000382611,NM_001134222,NM_033267,uc003jda.2,uc003jdb.2_5end | |||
|cluster_id=chr5:2751762..2751784,- | |||
|coexpression_cluster_id=C4493 | |||
|description=CAGE_peak_1_at_IRX2_5end | |||
|id=chr5:2751762..2751784,- | |||
|ontology_enrichment_celltype=CL:0002076!8.49e-10!43;CL:0000066!4.34e-09!254;CL:0002251!4.83e-09!21;CL:0002620!1.51e-08!23;CL:0000057!1.59e-08!75;CL:0002159!1.91e-07!13 | |||
|ontology_enrichment_celltype_v019=CL:0002251;4.05e-10;20!CL:0002620;1.33e-09;23!CL:0002076;7.00e-09;42!CL:0002159;2.60e-08;14 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,1.26e-11,42;CL:0000066,9.35e-11,253;CL:0002251,3.87e-10,20;CL:0002620,1.15e-09,23;CL:0002159,2.91e-08,14;CL:0000076,2.42e-07,63 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1749;2.01e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,1.95e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0003102!1.61e-21!95;UBERON:0000475!8.60e-15!365;UBERON:0002199!2.30e-14!45;UBERON:0002416!2.30e-14!45;UBERON:0002097!7.88e-13!40;UBERON:0000064!5.65e-11!219;UBERON:0004923!1.10e-10!57;UBERON:0004121!4.35e-10!169;UBERON:0000924!1.75e-09!173;UBERON:0006601!1.75e-09!173;UBERON:0000468!1.98e-09!659;UBERON:0001004!5.41e-09!72;UBERON:0000062!2.76e-08!511;UBERON:0000915!2.77e-08!52;UBERON:0005157!7.39e-08!51;UBERON:0000165!1.13e-07!28;UBERON:0000930!1.13e-07!28;UBERON:0000166!2.85e-07!21;UBERON:0003076!4.06e-07!15;UBERON:0003057!4.06e-07!15;UBERON:0005181!5.23e-07!35;UBERON:0001444!5.95e-07!48;UBERON:0005178!5.96e-07!34;UBERON:0002224!5.96e-07!34 | |||
|ontology_enrichment_uberon_v019=UBERON:0003102;2.20e-12;50!UBERON:0002199;4.43e-12;46!UBERON:0002416;4.43e-12;46!UBERON:0002097;3.06e-11;41!UBERON:0004733;8.92e-07;12!UBERON:0002028;8.92e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003102,5.85e-21,99;UBERON:0002199,1.07e-16,46;UBERON:0002416,1.07e-16,46;UBERON:0002097,5.79e-15,41;UBERON:0004923,1.80e-09,66;UBERON:0000915,4.14e-09,52;UBERON:0001004,6.63e-09,74;UBERON:0003076,7.98e-08,15;UBERON:0003057,7.98e-08,15;UBERON:0005181,2.93e-07,35;UBERON:0005178,3.42e-07,34;UBERON:0002224,3.42e-07,34;UBERON:0005631,4.68e-07,14;UBERON:0000158,4.68e-07,14;UBERON:0005157,4.92e-07,47;UBERON:0004733,8.95e-07,12;UBERON:0002028,8.95e-07,12;UBERON:0007277,8.95e-07,12 | |||
|phase1_expression=3.81524596468169,6.63711624062048,0.140954404095971,8.00586386825043,0,0,7.59899634504932,1.89515962028049,12.7980957817921,9.82935746006035,68.3845144612979,29.0527024933129,27.6955327139876,0.123766352960047,0.994192127183747,0,0,0,0,33.6120488549631,52.8361790322615,57.6756687519682,0.572471974262113,1.91624195102038,0.125542639594803,0,0,0,0,0,2.16742572642506,12.871897142705,21.0844143144775,16.2691764473387,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0.511450247374121,1.0843174571537,0,1.59331170856906,0,1.45990461090791,0,0.221729397462564,0,9.43049343583531,13.4789256668241,13.7190243830239,0,0,0,0,0,0,0,0.860234595106124,0,0,0,0,0,0.258416759169329,0,0.33472061276467,0.402829317109147,1.52054421143703,1.95249646038536,0,0,0,0,0,0,0,0.183201743930407,0,0,34.8875241714027,0.993943903390637,2.27934920996244,2.38336525463794,2.0078563452417,2.4826786753885,7.8494864019923,0,7.64669400093196,1.24484414159907,0.538842688278752,0.490385709340376,0.756787138224657,0,24.3694289107148,11.8620829195522,6.27519003698894,20.3250205550449,18.9069542816461,20.0722451016483,23.4552847192755,0.408308342509787,0,0.516628905878827,0,0.494533858557114,0,0,1.17835279767846,0.875829639103749,0.277064115484183,2.19488810440419,0.919463387397059,7.21142682751665,1.02088964844019,15.9656775763087,14.5219024396626,13.7755735753715,26.107925359343,14.7365116810968,10.8209026819164,12.2837125178849,11.3080142601648,13.738617727729,14.8935926804028,17.3974308433946,14.2248530000554,13.845374108148,8.96693674225998,6.78242369241951,17.58673763786,9.54611422067921,8.89094245705912,15.1247395600698,32.2047337021209,16.9643156589497,18.1406846276898,32.5493897629561,38.687600062038,10.9514672630871,10.2918550110862,11.0507937081984,6.03678306441573,3.60939740834793,0,0,0,0,0,0,0,0,0,0,0,2.4694440679884,2.94017422771084,0,0,0,0,15.6195316949754,0.171567810298526,33.0348359079963,12.3641928583382,19.4020916754448,11.2032018641821,21.8291564557918,30.1581087731078,0,0,0.117408694235822,0.433099343283221,3.24089858803628,1.14152491340759,47.4122638775565,32.6224741596052,0,0,0,9.3733833986777,6.38332087155666,6.09632918142262,31.0768073778884,22.669447204089,43.7056254248341,0,0,1.4512968087854,0.864719720501769,1.64115163454294,0.190493682876507,0.381988425558278,0,13.6857956818164,0.102827492703324,0,0,0,0,0,0,7.15312891703765,6.762422020448,0,0,2.31486636835928,34.0437916855868,1.8649552531127,0,0,0,7.49193223875591,0,0,0,0,0,0,0,0,4.0736225433569,8.04033550838797,0,0.144781306667579,0,0,0,0,0,0,0.254094624222463,0,0,0.502548796003046,0.637938751653163,0,0,0,0.12269149171914,0,0.271265023699736,1.45579603071565,0.178428988797162,0,0,1.20378439891088,2.27407504055985,0,1.99267679560631,4.60922921354258,4.95236602468072,0,2.40200396667599,0,0,0,20.0064197154531,31.6227335069944,25.7031749330228,4.96215615637554,1.84154367945675,5.89386198309454,0,6.14048698880044,0.160853921143607,0,16.3462275430815,12.0741973212926,6.15953670103569,0,12.2020897382957,15.9534473460941,4.41114234667227,18.4161977871793,1.26295892981067,0,0.786746489756545,10.3775910968705,4.1588282036384,17.2556949218908,8.76835347919564,5.27758144464378,0,0,0,0,0.270946437543853,4.01351819083883,13.7633187444321,6.64860807142979,13.4324852833307,0,0,0.512900250232778,0.328014645699706,0.325378394664303,11.6436343161926,1.55668090191184,1.23764249880882,34.4559322797703,39.6536750082278,0,0,0.616194468458578,0.460511024178389,0.137836572484531,0,0.145016693914229,0.426133137080504,0.0890320356467374,14.7103574671271,37.4770631361957,23.8635772364872,37.8330100399757,2.32422774648643,2.83331112147576,0,1.54016790088044,0.532306030317022,1.73986598415015,0,0.143124886741991,0,0,0,2.81487570442467,0.855877976067841,0,0,0,0.274537029736055,0.117812402345686,2.42618977887979,1.58510321173008,0.421258456238981,0,8.52997213709495,5.28250733783777,0.136499911407986,0.141405431953713,1.13008116620243,0,0,0,2.89387767133344,9.83842128069949,0,0.30982349809975,0,0,0,0,0,2.32218398827431,1.64647446479951,30.7373270750229,41.642231709153,12.22020831614,28.1526955725031,20.6892871236513,10.9206808901064,3.44404298136984,11.7930032967338,4.43430153536676,3.44585100310439,0,0,0,0,0,0,0,0,0,0,31.120107429591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.24873719888493,0,0,0,36.0504171953912,21.9753863816153,29.7945881036255,0,1.40669416410513,0,0,1.26675244876796,5.57894367102995,0,0,0,0,3.11039587661807,0,0,0,0.493217028184668,0,2.22273980289274,0,0,0,55.4711131111547,11.8945599994826,31.8999813191309,12.6310727596905,0,71.6254675756847,0,0,0,0,0.964771509003264,4.5774520895125,9.50981635408532,7.38869047383869,1.53569778007781,0,27.048206390049,0.461701551022782,0,31.8178188055523,61.2147134874646,57.2571650028983,50.4021832376433,7.96899062596202,37.3124343213044,0,0,0,0,0,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| ||
|short_description=p1@IRX2 | |||
}} | }} |
Latest revision as of 14:04, 17 September 2015
Short description: | p1@IRX2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_IRX2_5end |
Coexpression cluster: | C4493_merkel_non_pancreatic_oral_salivary_teratocarcinoma_large |
Association with transcript: | 0bp_to_ENST00000302057, ENST00000382611, NM_001134222, NM_033267, uc003jda.2, uc003jdb.2_5end |
EntrezGene: | IRX2 |
HGNC: | 14359 |
UniProt: | Q9BZI1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 1.26e-11 | 42 |
epithelial cell | 9.35e-11 | 253 |
epithelial cell of alimentary canal | 3.87e-10 | 20 |
skin fibroblast | 1.15e-09 | 23 |
general ecto-epithelial cell | 2.91e-08 | 14 |
squamous epithelial cell | 2.42e-07 | 63 |
Ontology term | p-value | n |
---|---|---|
surface structure | 5.85e-21 | 99 |
integument | 1.07e-16 | 46 |
integumental system | 1.07e-16 | 46 |
skin of body | 5.79e-15 | 41 |
organ component layer | 1.80e-09 | 66 |
thoracic segment of trunk | 4.14e-09 | 52 |
respiratory system | 6.63e-09 | 74 |
posterior neural tube | 7.98e-08 | 15 |
chordal neural plate | 7.98e-08 | 15 |
thoracic segment organ | 2.93e-07 | 35 |
thoracic cavity element | 3.42e-07 | 34 |
thoracic cavity | 3.42e-07 | 34 |
extraembryonic membrane | 4.68e-07 | 14 |
membranous layer | 4.68e-07 | 14 |
epithelial fold | 4.92e-07 | 47 |
segmental subdivision of hindbrain | 8.95e-07 | 12 |
hindbrain | 8.95e-07 | 12 |
presumptive hindbrain | 8.95e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 1.95e-07 | 14 |