FFCP PHASE1:Hg19::chr1:32716592..32716596,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3932 | |EntrezGene=3932 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6524 | |HGNC=6524 | ||
|TSSclassifier=strong | |||
|UniProt=P06239 | |UniProt=P06239 | ||
|association_with_transcript=-243bp_to_ENST00000336890,NM_005356,uc001bux.2_5end | |association_with_transcript=-243bp_to_ENST00000336890,NM_005356,uc001bux.2_5end | ||
|cluster_id=chr1:32716592..32716596,+ | |||
|coexpression_cluster_id=C1218 | |||
|description=CAGE_peak_5_at_LCK_5end | |description=CAGE_peak_5_at_LCK_5end | ||
|id=chr1:32716592..32716596,+ | |id=chr1:32716592..32716596,+ | ||
|ontology_enrichment_celltype=CL:0000542!5.52e-27!53;CL:0000051!5.52e-27!53;CL:0000838!3.25e-26!52;CL:0000945!9.21e-16!24;CL:0000826!9.21e-16!24;CL:0000084!5.26e-10!25;CL:0000827!5.26e-10!25;CL:0000236!1.42e-09!14 | |ontology_enrichment_celltype=CL:0000542!5.52e-27!53;CL:0000051!5.52e-27!53;CL:0000838!3.25e-26!52;CL:0000945!9.21e-16!24;CL:0000826!9.21e-16!24;CL:0000084!5.26e-10!25;CL:0000827!5.26e-10!25;CL:0000236!1.42e-09!14 | ||
|ontology_enrichment_celltype_v019=CL:0000945;1.41e-28;24!CL:0000542;7.32e-22;53!CL:0000236;5.44e-18;13!CL:0000084;9.75e-11;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,1.58e-33,52;CL:0000542,8.80e-33,53;CL:0000051,8.80e-33,53;CL:0000945,1.44e-28,24;CL:0000826,1.44e-28,24;CL:0000236,3.40e-21,14;CL:0000817,4.53e-13,3;CL:0000738,2.30e-12,136;CL:0002087,8.32e-12,115;CL:0000037,8.74e-12,168;CL:0002031,4.34e-11,120;CL:0000988,7.71e-11,177;CL:0000084,8.06e-11,25;CL:0000827,8.06e-11,25;CL:0000785,2.83e-09,2;CL:0000955,2.83e-09,2;CL:0000818,2.83e-09,2;CL:0000954,2.83e-09,2;CL:0000816,2.83e-09,2;CL:0002032,1.24e-08,161;CL:0000837,1.24e-08,161 | |||
|ontology_enrichment_development_v019=CL:0000051;7.32e-22;53!CL:0000954;2.81e-09;2 | |||
|ontology_enrichment_disease=DOID:162!1.92e-12!235;DOID:14566!2.39e-12!239;DOID:0050686!8.26e-09!137;DOID:2531!8.38e-08!51;DOID:0060083!8.38e-08!51;DOID:0060058!1.28e-07!10 | |ontology_enrichment_disease=DOID:162!1.92e-12!235;DOID:14566!2.39e-12!239;DOID:0050686!8.26e-09!137;DOID:2531!8.38e-08!51;DOID:0060083!8.38e-08!51;DOID:0060058!1.28e-07!10 | ||
|ontology_enrichment_disease_v019=DOID:0060058;9.61e-14;10!DOID:2531;9.46e-08;51!DOID:0060083;9.46e-08;51 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,8.39e-14,10;DOID:2531,1.01e-11,51;DOID:0060083,1.01e-11,51 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0,0,0.840547463227464,0.492603536699674,1.02324015707783,0.393364276848904,0,0.154816123316076,0,0,0.369754010166788,0.92960640696362,4.12290774213522,1.46800219667424,0,0.200544447470142,0.651032612147555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09227722252426,2.66852776159066,0,2.00197993518006,0.574752439954483,3.30522436392431,4.77026877267682,0.569212969109448,0.587237189370939,1.91136614062614,1.32171328579026,0.560508562981536,2.37045676297569,0,0,0.205601498999509,0.668745981562712,1.30368906653436,0,0,1.78256731016278,0,0.221533894583621,0,1.40900451698243,0.910415432919148,0.493313713811028,0.552700035571697,1.15921234294021,0.889719378972363,0.267540828089713,1.04535523804977,0.113309342697566,0.766440987203842,0.34362744548263,0.759059076058509,0.637130828648193,0,2.85135613334512,0.301150238155546,0.511946444617674,0,0.473554504088034,0.821127996921047,0.80642697289893,1.87208137048455,0.868946423296794,0,0,0,0,0,0,0,0,0.283604451492204,0,0.263504357079378,0.0654895377488563,0,0.370784442784429,0,0,0,0,1.71598473234038,1.11437250398869,0,0,0,0.56530794192401,0,0,0.208994966536811,0,0,0,0.402829317109147,0,0,0,0,0.0892997282840798,0,0,0,0.949265659568129,0,0,0,0,0,0,0.132409180813219,0.286836620748814,0,0,0,0,0,0.134710672069688,0.163461903113459,0,0,0,0,0,0,0,0,0.140450806702248,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226864366320042,0.179389635688862,0,0,0.300091096084402,0,0,0,0.168776332241266,0,0,0,0,0,0,0,0,0.272746120590835,0,0.609868530647977,0.795178609928912,0.813357600086629,0.414644220061482,0.252320850875628,0.72995471815166,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0,0,0,0,0,1.7658523976586,0,0.343135620597051,0,0,0,0.277765335475589,0,0,0,0.115930404975077,0,0.721832238805369,0,0.190254152234598,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0.102827492703324,0.600686115687835,0,0.112131084345361,0,0.07333828582095,0,0,1.690605505112,0,0,0.257207374262142,0,0.266422179016099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.61302349561811,0.788123040807709,0.646882724578552,0.77005821767849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,0.862856803274467,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0.355123450626254,0.0821271560138091,0,0.116210378459959,0.120859449591622,0,0,0,0.182091168006717,0,0,0,0,0,0,1.13733384070897,1.02056223165909,0.431831832204279,0,0,0,0,0,0.671624264166535,0,0,0,0,0,0,0,0,0.574265537996172,0,0,0,0,0,0,0,0.145016693914229,0,0,0,0,1.27612712494584,0,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.349934720244983,0.0962221127255121,0.670302275535787,1.08890984861323,0,0,0,0,0,0,0,0.569647187174163,0.238231775457789,1.23408681925858,0.648473311192717,0,0.79312517629427,1.06824071127473,0,0,0.929015875628594,9.37749884346892,1.84968792705877,2.71024663638998,0.997896857164083,0.5745161103971,0,0,0.561594356226918,0.456469358066384,0.156679895773023,0,0,0.1605880751037,0,0,0,0,0,0,0,0.278406173895242,0,0,1.6653598399891,0,0.18714054040822,0,0.242721043499027,0.222886768554957,0.284136146806413,0,0,0,0,0,0.111308705022906,0,0.63337622438398,0.19924798825107,0.276283915531148,0,0.102268682502155,0.738508832766417,0,0.0898683511473268,0,0,0.0986434056369336,2.3948309234694,0,0,0,0,0,0,0,0.455173793141999,0.254253650292766,0.236387681767936,2.41320361269025,0.291604613383254,0.173624994933292,0,0,0,0,0,0,0,0,0,0,0,0,0.108647371922008,0,0,0,1.02193298195737,0,0.332423363800313,0,0,0.335643173951685,2.27704479269022,0.476809736941136,1.47698645169619,0.163232808159148,0.282706142867882,0,0,0,0,0,0,0,0.202203398942031,0,0,5.10873409803865,0.391329237864179,0.485560759068186,0,0,0,0.063186579628488,0,0,0,0,0,0,2.84609546029793,0,0,0.0979923974143777,0.0870592065804026,0,0.171986032471617,0,0,0,0,0,0.225980740780532,0.959293472527256,0,0.126621591911757,0,0.0801588202515337,0,0,0.144090417154106,0.458146384663663,0.857974989309823,0,0.124252535565433,0.235694034616795,0.67952103036807,0.836822770498666,0,0,0,0,0,0,16.2990159653175,0,0,0,0,0,0,0,0,0,0.86661500537946,1.2362378757175,0.741438982396034,0,7.28190655765746,0,0,0.482259445395058,0,0.415440338029185,0.674921674654501,0,0,0,0,0,0.105600336519406,0.179287339332845,0.191915197319445,0,0,0.5085370753095,0,0,0,1.19730191562487,0.164185041498678,0,0.226624183040251,0,0,0,0,0,0.704815022316672,0,0,0,0.496166021811951,0,2.31405936923702,0,0,0,0,0,0.157054096250234,0,0,0,0,0,0.124192805882767,0,2.12466693535581,1.97143852804142,0,0,0,0.144921028610825,0,0.233713309847224,0,0.189403005275089,0,0,0,0.151230923763239,0.15543720058278,0.147855149989634,0.159296767163702,0,0.155262956876259,0.414706207840855,0.265841714557995,0,0,0,0,0,0.214821114084977,0,0,0.800055529326307,0,0,0,0,0,0,0,0,0,0,0,0.219284049578707,0,0,0,0.256241518587947,0.345430341731199,0,0,0,0.132864840313363,0.163565394255844,0,0.245772908753719,0.42262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| ||
|short_description=p5@LCK | |short_description=p5@LCK | ||
}} | }} |
Latest revision as of 14:55, 17 September 2015
Short description: | p5@LCK |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_LCK_5end |
Coexpression cluster: | C1218_hairy_plasma_lymphoma_xeroderma_hereditary_mycosis_splenic |
Association with transcript: | -243bp_to_ENST00000336890, NM_005356, uc001bux.2_5end |
EntrezGene: | LCK |
HGNC: | 6524 |
UniProt: | P06239 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 1.58e-33 | 52 |
lymphocyte | 8.80e-33 | 53 |
common lymphoid progenitor | 8.80e-33 | 53 |
lymphocyte of B lineage | 1.44e-28 | 24 |
pro-B cell | 1.44e-28 | 24 |
B cell | 3.40e-21 | 14 |
precursor B cell | 4.53e-13 | 3 |
leukocyte | 2.30e-12 | 136 |
nongranular leukocyte | 8.32e-12 | 115 |
hematopoietic stem cell | 8.74e-12 | 168 |
hematopoietic lineage restricted progenitor cell | 4.34e-11 | 120 |
hematopoietic cell | 7.71e-11 | 177 |
T cell | 8.06e-11 | 25 |
pro-T cell | 8.06e-11 | 25 |
mature B cell | 2.83e-09 | 2 |
pre-B-II cell | 2.83e-09 | 2 |
transitional stage B cell | 2.83e-09 | 2 |
small pre-B-II cell | 2.83e-09 | 2 |
immature B cell | 2.83e-09 | 2 |
hematopoietic oligopotent progenitor cell | 1.24e-08 | 161 |
hematopoietic multipotent progenitor cell | 1.24e-08 | 161 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 8.39e-14 | 10 |
hematologic cancer | 1.01e-11 | 51 |
immune system cancer | 1.01e-11 | 51 |