FFCP PHASE1:Hg19::chr20:62667589..62667598,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=284739 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=27655 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=99bp_to_uc010gko.2_5end | |||
|cluster_id=chr20:62667589..62667598,+ | |||
|coexpression_cluster_id=C258 | |||
|description=CAGE_peak_9_at_LINC00176_5end | |||
|id=chr20:62667589..62667598,+ | |||
|ontology_enrichment_celltype=CL:0000181!1.34e-33!12;CL:0000417!1.34e-33!12;CL:0000668!1.34e-33!12;CL:0000414!1.34e-33!12;CL:0000412!1.34e-33!12;CL:0000182!1.34e-33!12;CL:0000223!3.33e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0000182;5.11e-66;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,5.11e-66,12;CL:0000223,1.72e-14,58 | |||
|ontology_enrichment_development_v019=UBERON:0004161;6.65e-72;11!UBERON:0009497;4.89e-61;13!UBERON:0001041;4.24e-27;30!UBERON:0003104;5.79e-26;31!CL:0000223;2.80e-09;58 | |||
|ontology_enrichment_disease=DOID:7!1.05e-10!39 | |||
|ontology_enrichment_disease_v019=DOID:7;1.83e-19;39 | |||
|ontology_enrichment_disease_v019_2=DOID:7,4.38e-21,39;DOID:305,2.62e-08,106 | |||
|ontology_enrichment_uberon=UBERON:0005057!2.74e-34!26;UBERON:0002368!1.49e-25!35;UBERON:0002370!2.36e-25!4;UBERON:0005058!2.36e-25!4;UBERON:0009113!2.36e-25!4;UBERON:0003295!2.36e-25!4;UBERON:0005562!2.36e-25!4;UBERON:0002107!1.88e-21!19;UBERON:0006925!1.88e-21!19;UBERON:0008836!1.88e-21!19;UBERON:0000949!6.24e-20!45;UBERON:0008835!1.33e-18!22;UBERON:0003894!1.33e-18!22;UBERON:0009854!8.09e-18!23;UBERON:0003351!2.81e-17!6;UBERON:0003929!1.21e-16!54;UBERON:0007499!1.95e-16!25;UBERON:0009497!1.95e-16!25;UBERON:0000015!1.95e-16!25;UBERON:0002423!1.95e-16!25;UBERON:0006235!1.95e-16!25;UBERON:0004161!1.95e-16!25;UBERON:0009856!8.00e-16!26;UBERON:0002530!3.01e-15!59;UBERON:0004177!5.81e-15!7;UBERON:0002365!2.38e-13!31;UBERON:0002330!2.38e-13!31;UBERON:0005911!5.27e-11!82;UBERON:0000974!8.89e-11!10;UBERON:0003408!8.89e-11!10;UBERON:0001042!8.89e-11!10;UBERON:0009145!8.89e-11!10;UBERON:0006562!6.93e-10!11;UBERON:0009722!6.93e-10!11;UBERON:0007690!6.93e-10!11;UBERON:0001041!3.23e-09!98;UBERON:0002405!8.65e-08!115;UBERON:0005172!1.06e-07!55;UBERON:0005173!1.06e-07!55;UBERON:0008814!1.70e-07!15;UBERON:0002417!5.60e-07!61;UBERON:0000916!5.60e-07!61;UBERON:0000077!6.00e-07!130;UBERON:0004921!6.00e-07!129;UBERON:0004185!6.00e-07!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;3.83e-42;19!UBERON:0006925;3.83e-42;19!UBERON:0002423;2.66e-32;25!UBERON:0002365;7.83e-25;31!UBERON:0002330;7.83e-25;31!UBERON:0002368;1.51e-22;33!UBERON:0000949;4.83e-17;43!UBERON:0002417;3.41e-11;58!UBERON:0000916;3.41e-11;58!UBERON:0005172;4.08e-09;52!UBERON:0005173;4.08e-09;52!UBERON:0002530;4.12e-09;57 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,3.83e-42,19;UBERON:0006925,3.83e-42,19;UBERON:0008836,3.83e-42,19;UBERON:0008835,1.49e-36,22;UBERON:0003894,1.49e-36,22;UBERON:0009854,5.16e-35,23;UBERON:0007499,2.66e-32,25;UBERON:0009497,2.66e-32,25;UBERON:0000015,2.66e-32,25;UBERON:0002423,2.66e-32,25;UBERON:0006235,2.66e-32,25;UBERON:0004161,2.66e-32,25;UBERON:0009856,4.21e-31,26;UBERON:0002365,2.93e-26,31;UBERON:0002330,2.93e-26,31;UBERON:0002368,2.23e-23,35;UBERON:0000949,2.09e-18,45;UBERON:0003929,1.70e-15,54;UBERON:0005172,1.70e-15,54;UBERON:0005173,1.70e-15,54;UBERON:0002530,2.92e-14,59;UBERON:0002417,4.87e-14,60;UBERON:0000916,4.87e-14,60;UBERON:0005911,1.66e-10,82;UBERON:0001041,5.98e-10,87;UBERON:0005177,1.11e-08,101;UBERON:0009569,6.64e-08,112;UBERON:0003914,1.34e-07,117;UBERON:0004921,1.75e-07,118;UBERON:0005256,2.56e-07,122 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.158936578980379,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.6495949527454,5.51482276150566,3.95596120229599,4.24642326281365,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0.0620747142958579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | |||
|short_description=p9@LINC00176 | |||
}} |
Latest revision as of 15:06, 17 September 2015
Short description: | p9@LINC00176 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_LINC00176_5end |
Coexpression cluster: | C258_hepatoblastoma_hepatocellular_signet_colon_Intestinal_Prostate_gastric |
Association with transcript: | 99bp_to_uc010gko.2_5end |
EntrezGene: | LINC00176 |
HGNC: | 27655 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 5.11e-66 | 12 |
endodermal cell | 1.72e-14 | 58 |
Ontology term | p-value | n |
---|---|---|
liver | 3.83e-42 | 19 |
digestive gland | 3.83e-42 | 19 |
liver bud | 3.83e-42 | 19 |
hepatic diverticulum | 1.49e-36 | 22 |
liver primordium | 1.49e-36 | 22 |
digestive tract diverticulum | 5.16e-35 | 23 |
epithelial sac | 2.66e-32 | 25 |
epithelium of foregut-midgut junction | 2.66e-32 | 25 |
anatomical boundary | 2.66e-32 | 25 |
hepatobiliary system | 2.66e-32 | 25 |
foregut-midgut junction | 2.66e-32 | 25 |
septum transversum | 2.66e-32 | 25 |
sac | 4.21e-31 | 26 |
exocrine gland | 2.93e-26 | 31 |
exocrine system | 2.93e-26 | 31 |
endocrine gland | 2.23e-23 | 35 |
endocrine system | 2.09e-18 | 45 |
gut epithelium | 1.70e-15 | 54 |
abdomen element | 1.70e-15 | 54 |
abdominal segment element | 1.70e-15 | 54 |
gland | 2.92e-14 | 59 |
abdominal segment of trunk | 4.87e-14 | 60 |
abdomen | 4.87e-14 | 60 |
endo-epithelium | 1.66e-10 | 82 |
foregut | 5.98e-10 | 87 |
trunk region element | 1.11e-08 | 101 |
subdivision of trunk | 6.64e-08 | 112 |
epithelial tube | 1.34e-07 | 117 |
subdivision of digestive tract | 1.75e-07 | 118 |
trunk mesenchyme | 2.56e-07 | 122 |
Ontology term | p-value | n |
---|---|---|
disease of anatomical entity | 4.38e-21 | 39 |
carcinoma | 2.62e-08 | 106 |