FFCP PHASE1:Hg19::chr20:62697597..62697638,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6919 | |EntrezGene=6919 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11614 | |HGNC=11614 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=31bp_to_uc010gkt.2_5end | |association_with_transcript=31bp_to_uc010gkt.2_5end | ||
|cluster_id=chr20:62697597..62697638,+ | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_5_at_TCEA2_5end | |description=CAGE_peak_5_at_TCEA2_5end | ||
|id=chr20:62697597..62697638,+ | |id=chr20:62697597..62697638,+ | ||
|ontology_enrichment_celltype=CL:0000945!4.08e-13!24;CL:0000826!4.08e-13!24;CL:0000542!2.57e-08!53;CL:0000051!2.57e-08!53;CL:0000838!1.43e-07!52;CL:0000236!1.85e-07!14 | |ontology_enrichment_celltype=CL:0000945!4.08e-13!24;CL:0000826!4.08e-13!24;CL:0000542!2.57e-08!53;CL:0000051!2.57e-08!53;CL:0000838!1.43e-07!52;CL:0000236!1.85e-07!14 | ||
|ontology_enrichment_celltype_v019=CL:0002127;7.18e-09;1!CL:0000911;7.18e-09;1!CL:0000814;7.18e-09;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002127,7.75e-09,1;CL:0000914,7.75e-09,1;CL:0000911,7.75e-09,1;CL:0000814,7.75e-09,1;CL:0002042,7.75e-09,1;CL:0002039,7.75e-09,1;CL:0002040,7.75e-09,1;CL:0002041,7.75e-09,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:14566!4.08e-17!239;DOID:162!6.54e-16!235;DOID:305!5.73e-14!106;DOID:0050687!7.98e-11!143;DOID:2531!7.96e-07!51;DOID:0060083!7.96e-07!51 | |ontology_enrichment_disease=DOID:14566!4.08e-17!239;DOID:162!6.54e-16!235;DOID:305!5.73e-14!106;DOID:0050687!7.98e-11!143;DOID:2531!7.96e-07!51;DOID:0060083!7.96e-07!51 | ||
|ontology_enrichment_disease_v019=DOID:12603;9.02e-09;1!DOID:3908;6.95e-07;5 | |||
|ontology_enrichment_disease_v019_2=DOID:12603,9.02e-09,1;DOID:3908,6.45e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0001737!3.24e-12!9;UBERON:0004921!4.66e-09!129;UBERON:0004185!4.66e-09!129;UBERON:0001557!1.35e-08!19;UBERON:0001041!2.96e-08!98;UBERON:0000077!2.12e-07!130;UBERON:0001007!3.90e-07!155;UBERON:0001555!3.90e-07!155;UBERON:0007026!3.90e-07!155 | |||
|ontology_enrichment_uberon_v019=UBERON:0004913;1.47e-08;1!UBERON:0003703;1.47e-08;1!UBERON:0001174;1.47e-08;1!UBERON:0004914;1.47e-08;1!UBERON:0002394;3.72e-08;4!UBERON:0003928;3.72e-08;4!UBERON:0002423;2.42e-07;25!UBERON:0000058;4.86e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007499,3.17e-10,25;UBERON:0009856,8.19e-10,26;UBERON:0004913,2.06e-08,1;UBERON:0003703,2.06e-08,1;UBERON:0001174,2.06e-08,1;UBERON:0004914,2.06e-08,1;UBERON:0008835,2.52e-08,22;UBERON:0003894,2.52e-08,22;UBERON:0009854,5.92e-08,23;UBERON:0005911,1.87e-07,82;UBERON:0009497,2.67e-07,25;UBERON:0000015,2.67e-07,25;UBERON:0002423,2.67e-07,25;UBERON:0006235,2.67e-07,25;UBERON:0004161,2.67e-07,25;UBERON:0001041,6.84e-07,87 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.331397375727916,0,0,0,0,0,0,0,0,0,0,0.382067028739756,0.328402357799783,0.393553906568396,0,0.383829398097213,0,0,0,0,0.154934401160603,0.284338464974843,0,0,0.200544447470142,0,0,0,0,0,0,0,0.232429036905685,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75996244461323,0,0,0.853460445133014,0.400395987036012,1.14950487990897,0.661044872784862,0,0.569212969109448,0.587237189370939,0.382273228125229,0,0,0.263384084775077,0,0,0,0.167186495390678,0,0,0,0.334231370655521,0,0,0,0.128091319725675,0.650296737799391,0.164437904603676,0.552700035571697,0,0.14828656316206,0,0,0,0.383220493601921,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486634870302636,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213557388818567,0,0,0,0,0,0,0,0,0.0920498986422993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354920400119532,0.674338760312407,1.20505514941741,0.55146986366197,0.217879444092406,0.237270619111097,0.539325232640658,0.588664395376038,0.38474715694639,0,0,0,0,35.4914097501126,0.982827216677626,3.54473944008842,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.268675568108545,0,0.383382679165211,0,0,0,0.288239906833923,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0.355391948742546,0,0.301439377059586,0,0,0,0,0,0,0,0,0,0,0.179060963239896,3.25046917581229,0,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0,0,0,0,0,0,0,0,0,0,0,0.215915916102139,0,0.270946437543853,0,0,0.831076008928724,0.223874754722178,0,0,0.256450125116389,0,0,16.5896028752833,0.183138929636687,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0.48763373908959,0,1.05650146756755,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,15.0630081242847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.22963810150862,0,0,0,0.59873811429845,0,1.2700414963433,0,0,0,0,0,0.338583555603207,0,0,0.425846237690326,0.343505344755765,0,0,0,0.19538809540204,0,0,0.540911356951966,0.33307196799782,0,0,0,0,3.67763168115679,0.284136146806413,0,0,0,0,0,0,3.95529298144223,0,0,0,0,0.102268682502155,0.123084805461069,0,0.269605053441981,1.07412704805365,1.02314474045374,0,0,0,0,0,0,0,0,0,0.1137934482855,1.27126825146383,1.65471377237555,0,0,0,0,0,0,0.110579259931225,0,0,0.871507708151921,0,0,0,0,0,0,0,0,0,0,0.470940769185074,0.166211681900156,0,0,0.167821586975843,0,0,0.421996129056054,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242780379534093,0,0,0,0,0,0,0.664653872707185,0,0.313932918407225,1.19472429772959,0.284609546029793,0.970722711091971,0,0.587954384486266,0.34823682632161,0,0,3.19295893253981,4.45844834225732,4.27000376676688,0,0,0,0.137041924646751,0,0,0.195551382734803,0.160317640503067,0,0,0,0,0,11.8124934350283,0,0.707082103850386,0.135904206073614,0.313808538937,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0984274815147488,0.254019996197353,0,0,0,0,0,0,0,0,0,0,0,0.105600336519406,5.1993328406525,0,0,0,0.25426853765475,0,0,0.326587360109409,0,0.164185041498678,0,0.226624183040251,6.74140274919179,0,0,0,0,0,0,0,0,0,0,0.243585196761792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.734210113519403,0,0.617602894321944,0,0,0.192914038270915,0,0,0.345430341731199,0,0.138258436151731,0,0,0,0.327609848846413,0.491545817507439,0.633936370075881,0,0.106691729694141,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294443155503077,0,0,0,0,0,0,0,0.20170506870352,0,0,0,1.03499260351932,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0,0.230467975111559,0.171488009437418,0,0,4.37317211270682,0.111231401892069,0,0,0.280272163313789,0,0,0,0,0,0,0,0,0,0,0,0,0.118332000730565,0.255640214277473,0,0.22910686854405,0,0,0.223710863595585,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0.218559560503957,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0.705789743431384,0.401206833445841,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134704106029175,0,0,0.0814032686109745,0.106727345877715,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.331397375727916,0,0,0,0,0,0,0,0,0,0,0.382067028739756,0.328402357799783,0.393553906568396,0,0.383829398097213,0,0,0,0,0.154934401160603,0.284338464974843,0,0,0.200544447470142,0,0,0,0,0,0,0,0.232429036905685,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75996244461323,0,0,0.853460445133014,0.400395987036012,1.14950487990897,0.661044872784862,0,0.569212969109448,0.587237189370939,0.382273228125229,0,0,0.263384084775077,0,0,0,0.167186495390678,0,0,0,0.334231370655521,0,0,0,0.128091319725675,0.650296737799391,0.164437904603676,0.552700035571697,0,0.14828656316206,0,0,0,0.383220493601921,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486634870302636,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213557388818567,0,0,0,0,0,0,0,0,0.0920498986422993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354920400119532,0.674338760312407,1.20505514941741,0.55146986366197,0.217879444092406,0.237270619111097,0.539325232640658,0.588664395376038,0.38474715694639,0,0,0,0,35.4914097501126,0.982827216677626,3.54473944008842,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.268675568108545,0,0.383382679165211,0,0,0,0.288239906833923,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0.355391948742546,0,0.301439377059586,0,0,0,0,0,0,0,0,0,0,0.179060963239896,3.25046917581229,0,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0,0,0,0,0,0,0,0,0,0,0,0.215915916102139,0,0.270946437543853,0,0,0.831076008928724,0.223874754722178,0,0,0.256450125116389,0,0,16.5896028752833,0.183138929636687,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0.48763373908959,0,1.05650146756755,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,15.0630081242847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.22963810150862,0,0,0,0.59873811429845,0,1.2700414963433,0,0,0,0,0,0.338583555603207,0,0,0.425846237690326,0.343505344755765,0,0,0,0.19538809540204,0,0,0.540911356951966,0.33307196799782,0,0,0,0,3.67763168115679,0.284136146806413,0,0,0,0,0,0,3.95529298144223,0,0,0,0,0.102268682502155,0.123084805461069,0,0.269605053441981,1.07412704805365,1.02314474045374,0,0,0,0,0,0,0,0,0,0.1137934482855,1.27126825146383,1.65471377237555,0,0,0,0,0,0,0.110579259931225,0,0,0.871507708151921,0,0,0,0,0,0,0,0,0,0,0.470940769185074,0.166211681900156,0,0,0.167821586975843,0,0,0.421996129056054,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242780379534093,0,0,0,0,0,0,0.664653872707185,0,0.313932918407225,1.19472429772959,0.284609546029793,0.970722711091971,0,0.587954384486266,0.34823682632161,0,0,3.19295893253981,4.45844834225732,4.27000376676688,0,0,0,0.137041924646751,0,0,0.195551382734803,0.160317640503067,0,0,0,0,0,11.8124934350283,0,0.707082103850386,0.135904206073614,0.313808538937,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0984274815147488,0.254019996197353,0,0,0,0,0,0,0,0,0,0,0,0.105600336519406,5.1993328406525,0,0,0,0.25426853765475,0,0,0.326587360109409,0,0.164185041498678,0,0.226624183040251,6.74140274919179,0,0,0,0,0,0,0,0,0,0,0.243585196761792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.734210113519403,0,0.617602894321944,0,0,0.192914038270915,0,0,0.345430341731199,0,0.138258436151731,0,0,0,0.327609848846413,0.491545817507439,0.633936370075881,0,0.106691729694141,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294443155503077,0,0,0,0,0,0,0,0.20170506870352,0,0,0,1.03499260351932,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0,0.230467975111559,0.171488009437418,0,0,4.37317211270682,0.111231401892069,0,0,0.280272163313789,0,0,0,0,0,0,0,0,0,0,0,0,0.118332000730565,0.255640214277473,0,0.22910686854405,0,0,0.223710863595585,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0.218559560503957,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0.705789743431384,0.401206833445841,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134704106029175,0,0,0.0814032686109745,0.106727345877715,0,0,0,0,0,0,0,0 | ||
|short_description=p5@TCEA2 | |short_description=p5@TCEA2 | ||
}} | }} |
Latest revision as of 15:16, 17 September 2015
Short description: | p5@TCEA2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_TCEA2_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 31bp_to_uc010gkt.2_5end |
EntrezGene: | TCEA2 |
HGNC: | 11614 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
innate effector T cell | 7.75e-09 | 1 |
immature NK T cell | 7.75e-09 | 1 |
effector T cell | 7.75e-09 | 1 |
mature NK T cell | 7.75e-09 | 1 |
immature NK T cell stage IV | 7.75e-09 | 1 |
immature NK T cell stage I | 7.75e-09 | 1 |
immature NK T cell stage II | 7.75e-09 | 1 |
immature NK T cell stage III | 7.75e-09 | 1 |
Ontology term | p-value | n |
---|---|---|
epithelial sac | 3.17e-10 | 25 |
sac | 8.19e-10 | 26 |
hepatopancreatic ampulla | 2.06e-08 | 1 |
extrahepatic bile duct | 2.06e-08 | 1 |
common bile duct | 2.06e-08 | 1 |
duodenal papilla | 2.06e-08 | 1 |
hepatic diverticulum | 2.52e-08 | 22 |
liver primordium | 2.52e-08 | 22 |
digestive tract diverticulum | 5.92e-08 | 23 |
endo-epithelium | 1.87e-07 | 82 |
epithelium of foregut-midgut junction | 2.67e-07 | 25 |
anatomical boundary | 2.67e-07 | 25 |
hepatobiliary system | 2.67e-07 | 25 |
foregut-midgut junction | 2.67e-07 | 25 |
septum transversum | 2.67e-07 | 25 |
foregut | 6.84e-07 | 87 |
Ontology term | p-value | n |
---|---|---|
acute leukemia | 9.02e-09 | 1 |
non-small cell lung carcinoma | 6.45e-07 | 5 |