FFCP PHASE1:Hg19::chr2:158485242..158485255,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=130399 | |EntrezGene=130399 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18123 | |HGNC=18123 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-3bp_to_ENST00000335450,ENST00000348328_5end | |association_with_transcript=-3bp_to_ENST00000335450,ENST00000348328_5end | ||
|cluster_id=chr2:158485242..158485255,- | |||
|coexpression_cluster_id=C29 | |coexpression_cluster_id=C29 | ||
|description=CAGE_peak_5_at_ACVR1C_5end | |description=CAGE_peak_5_at_ACVR1C_5end | ||
|id=chr2:158485242..158485255,- | |id=chr2:158485242..158485255,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000453;3.46e-26;5!CL:0000136;3.80e-18;13!CL:0000990;7.35e-15;8!CL:0000451;2.84e-12;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000453,2.79e-26,5;CL:0000136,8.98e-16,15;CL:0000990,6.53e-15,8;CL:0000451,2.58e-12,10 | |||
|ontology_enrichment_development_v019=UBERON:0004874;1.44e-15;1!UBERON:0006222;2.56e-15;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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| ||
|short_description=p5@ACVR1C | |short_description=p5@ACVR1C | ||
}} | }} |
Latest revision as of 17:47, 17 September 2015
Short description: | p5@ACVR1C |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_ACVR1C_5end |
Coexpression cluster: | C29_mature_adipose_Adipocyte_breast_Lymphatic_vein_heart |
Association with transcript: | -3bp_to_ENST00000335450, ENST00000348328_5end |
EntrezGene: | ACVR1C |
HGNC: | 18123 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Langerhans cell | 2.79e-26 | 5 |
fat cell | 8.98e-16 | 15 |
conventional dendritic cell | 6.53e-15 | 8 |
dendritic cell | 2.58e-12 | 10 |
Ontology term | p-value | n |
---|---|---|
penis | 1.54e-15 | 1 |
intromittent organ | 1.54e-15 | 1 |
lateral plate mesenchyme | 1.54e-15 | 1 |
undifferentiated genital tubercle | 1.54e-15 | 1 |
somatopleure | 1.54e-15 | 1 |
putamen | 2.75e-15 | 1 |
telencephalic nucleus | 6.56e-09 | 7 |
globus pallidus | 2.87e-08 | 2 |
pallidum | 2.87e-08 | 2 |
basal ganglion | 4.03e-07 | 9 |
neural nucleus | 4.03e-07 | 9 |
nuclear complex of neuraxis | 4.03e-07 | 9 |
nucleus of brain | 4.03e-07 | 9 |
aggregate regional part of brain | 4.03e-07 | 9 |
collection of basal ganglia | 4.03e-07 | 9 |
cerebral subcortex | 4.03e-07 | 9 |